Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 3.7e-45 185.7 94 100.0
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 5.8e-38 161.8 94 87.2
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 1.3e-37 160.6 93 87.1
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 2.1e-32 143.3 94 79.8
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 8.1e-32 141.4 97 78.4
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 1.4e-31 140.6 98 74.5
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 2.4e-31 139.8 94 76.6
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 4.0e-31 139.0 99 72.7
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 5.2e-31 138.7 103 75.7
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 5.2e-31 138.7 96 74.0
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 6.8e-31 138.3 98 74.5
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 6.8e-31 138.3 99 73.7
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 1.2e-30 137.5 102 73.5
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 1.5e-30 137.1 99 71.7
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.5e-30 137.1 94 76.6
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 1.5e-30 137.1 90 78.9
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 2.0e-30 136.7 99 71.7
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 2.6e-30 136.3 105 68.6
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 2.6e-30 136.3 99 73.7
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 9.9e-30 134.4 102 72.5
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 9.9e-30 134.4 102 71.6
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 9.9e-30 134.4 95 75.8
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 1.3e-29 134.0 107 72.0
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 4.9e-29 132.1 103 71.8
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 6.4e-29 131.7 93 74.2
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 8.4e-29 131.3 94 74.5
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 8.4e-29 131.3 94 73.4
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 1.1e-28 131.0 102 72.5
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 1.1e-28 131.0 99 70.7
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 1.4e-28 130.6 94 72.3
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 1.9e-28 130.2 95 72.6
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 7.1e-28 128.3 98 70.4
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 9.2e-28 127.9 97 71.1
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 1.2e-27 127.5 98 70.4
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 1.2e-27 127.5 100 70.0
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 1.2e-27 127.5 100 70.0
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 1.2e-27 127.5 100 70.0
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 1.2e-27 127.5 96 72.9
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 1.2e-27 127.5 94 73.4
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 2.7e-27 126.3 91 70.3
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 2.7e-27 126.3 103 70.9
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 3.5e-27 125.9 101 68.3
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 6.0e-27 125.2 94 72.3
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 6.0e-27 125.2 96 69.8
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 1.3e-26 124.0 95 70.5
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 1.3e-26 124.0 103 67.0
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 2.3e-26 123.2 101 66.3
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 3.0e-26 122.9 70 87.1
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 6.6e-26 121.7 93 71.0
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 6.6e-26 121.7 99 69.7
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 1.5e-25 120.6 93 68.8
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 1.5e-25 120.6 95 62.1
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 1.9e-25 120.2 105 62.9
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 4.3e-25 119.0 92 67.4
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 5.6e-25 118.6 109 59.6
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 9.6e-25 117.9 107 65.4
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 1.6e-24 117.1 85 74.1
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 1.6e-24 117.1 95 68.4
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 1.6e-24 117.1 66 87.9
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 2.1e-24 116.7 100 64.0
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 2.1e-24 116.7 70 80.0
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 2.8e-24 116.3 93 68.8
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 3.6e-24 115.9 95 67.4
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 4.7e-24 115.5 99 64.6
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 6.2e-24 115.2 80 73.8
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 1.4e-23 114.0 95 66.3
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 1.8e-23 113.6 94 67.0
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 2.4e-23 113.2 69 82.6
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 2.4e-23 113.2 63 85.7
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 4.0e-23 112.5 80 72.5
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 6.9e-23 111.7 62 90.3
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 6.9e-23 111.7 62 90.3
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 9.0e-23 111.3 63 84.1
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.2e-22 110.9 102 59.8
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 1.2e-22 110.9 92 66.3
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 2.6e-22 109.8 63 82.5
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 2.6e-22 109.8 71 78.9
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 4.4e-22 109.0 67 79.1
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 7.6e-22 108.2 95 62.1
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 9.9e-22 107.8 77 71.4
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 9.9e-22 107.8 98 60.2
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 1.3e-21 107.5 78 74.4
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 1.3e-21 107.5 92 65.2
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 2.2e-21 106.7 94 62.8
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 3.8e-21 105.9 66 83.3
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 4.9e-21 105.5 91 65.9
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 1.1e-20 104.4 51 96.1
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 1.9e-20 103.6 51 96.1
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 2.4e-20 103.2 92 63.0
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 5.4e-20 102.1 80 68.8
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 1.7e-18 97.1 66 72.7
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 6.6e-18 95.1 99 55.6
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 9.6e-17 91.3 99 53.5
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 9.6e-17 91.3 60 73.3
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 6.7e-10 68.6 81 46.9


User provided reference genes

Program Settings