Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 1.9e-128 462.6 246 100.0
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 4.8e-76 288.5 189 78.3
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 3.4e-69 265.8 188 72.9
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 2.2e-68 263.1 190 70.0
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 8.3e-68 261.2 189 68.8
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 8.3e-68 261.2 189 68.8
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 8.3e-68 261.2 189 68.8
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 1.4e-67 260.4 190 68.4
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.8e-67 260.0 189 68.8
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 1.8e-67 260.0 190 68.4
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 2.4e-67 259.6 189 68.3
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 2.0e-66 256.5 190 68.4
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 3.5e-66 255.8 190 70.0
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 3.5e-66 255.8 189 68.8
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 3.5e-66 255.8 189 67.2
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 4.5e-66 255.4 190 68.4
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 4.5e-66 255.4 190 68.4
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 4.5e-66 255.4 190 66.3
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 5.9e-66 255.0 190 68.9
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 5.9e-66 255.0 189 67.2
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 7.7e-66 254.6 189 67.2
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 1.0e-65 254.2 190 67.4
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 1.0e-65 254.2 196 67.9
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 1.7e-65 253.4 189 68.3
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 1.7e-65 253.4 190 66.3
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 1.7e-65 253.4 190 68.9
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 2.3e-65 253.1 190 68.4
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 2.9e-65 252.7 190 66.8
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 2.9e-65 252.7 190 68.4
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 2.9e-65 252.7 189 66.1
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 2.9e-65 252.7 190 65.8
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 3.8e-65 252.3 190 67.4
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 3.8e-65 252.3 190 67.4
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 5.0e-65 251.9 190 67.9
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 5.0e-65 251.9 189 65.6
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 8.6e-65 251.1 190 66.3
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 8.6e-65 251.1 188 68.1
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 1.1e-64 250.8 190 66.3
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 1.1e-64 250.8 190 65.8
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 1.5e-64 250.4 190 66.8
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 2.5e-64 249.6 190 66.8
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 2.5e-64 249.6 190 67.9
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 3.3e-64 249.2 190 67.9
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 3.3e-64 249.2 190 65.8
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 4.3e-64 248.8 189 66.1
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 5.6e-64 248.4 189 67.2
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 7.3e-64 248.1 188 67.0
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 7.3e-64 248.1 190 65.8
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 7.3e-64 248.1 190 65.8
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 9.5e-64 247.7 190 66.8
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 1.2e-63 247.3 190 65.8
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 1.6e-63 246.9 190 64.2
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 2.1e-63 246.5 188 67.0
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 2.8e-63 246.1 190 65.8
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 2.8e-63 246.1 190 65.3
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 4.7e-63 245.4 188 65.4
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 4.7e-63 245.4 190 63.2
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 6.1e-63 245.0 189 65.6
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 6.1e-63 245.0 190 64.7
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 6.1e-63 245.0 189 65.1
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 1.0e-62 244.2 190 63.7
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 1.0e-62 244.2 190 65.3
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 1.0e-62 244.2 190 65.3
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 1.4e-62 243.8 187 66.3
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 1.8e-62 243.4 180 67.8
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 2.3e-62 243.0 190 66.3
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 2.3e-62 243.0 190 64.2
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 2.3e-62 243.0 190 64.2
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 2.3e-62 243.0 188 66.0
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 3.0e-62 242.7 188 62.8
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 3.0e-62 242.7 190 64.2
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 3.0e-62 242.7 190 65.3
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 5.2e-62 241.9 190 64.2
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 8.9e-62 241.1 190 62.6
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.2e-61 240.7 190 63.2
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 3.4e-61 239.2 190 62.6
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 3.4e-61 239.2 190 62.6
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 3.4e-61 239.2 190 62.6
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 3.4e-61 239.2 190 62.6
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 3.7e-60 235.7 187 62.0
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 4.9e-60 235.3 186 64.0
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 5.4e-59 231.9 187 61.5
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 9.2e-59 231.1 182 65.4
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 2.7e-58 229.6 187 60.4
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.7e-58 229.6 189 63.0
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 5.9e-58 228.4 187 60.4
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 1.0e-57 227.6 189 61.4
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 6.6e-57 224.9 179 63.1
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 8.6e-57 224.6 220 55.5
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 2.5e-56 223.0 188 59.0
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 3.6e-55 219.2 185 58.4
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 3.7e-52 209.1 186 55.9
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 8.3e-52 208.0 173 61.8
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.0e-50 203.4 186 55.4
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.5e-48 197.2 172 60.5
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 4.3e-48 195.7 183 57.9
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 8.1e-47 191.4 237 48.1
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 5.8e-45 185.3 171 56.7
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 1.7e-44 183.7 180 52.8
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 3.7e-44 182.6 153 61.4
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 1.6e-42 177.2 188 48.9
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 2.5e-40 169.9 186 49.5
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 4.3e-40 169.1 179 48.6
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 5.2e-38 162.2 149 53.7
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 2.1e-31 140.2 129 59.7
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 1.5e-29 134.0 129 55.8
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.9e-20 103.2 98 52.0
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 7.9e-18 95.1 70 71.4


User provided reference genes

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