Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G042700 Prunus persica HOM05D000966 ORTHO05D004359 6.0e-46 187.2 97 100.0
Prupe.8G017300 Prunus persica HOM05D000966 ORTHO05D004359 1.6e-38 162.5 95 88.4
Prupe.1G489300 Prunus persica HOM05D000966 ORTHO05D004359 1.4e-15 86.3 44 90.9
CANSAT25G2222 Cannabis sativa HOM05D000966 ORTHO05D004359 1.3e-13 79.7 44 84.1
MD08G1159600 Malus domestica HOM05D000966 ORTHO05D004359 6.7e-13 77.4 44 81.8
MD15G1133700 Malus domestica HOM05D000966 ORTHO05D004359 1.5e-12 76.3 44 81.8
CANSAT64G2451 Cannabis sativa HOM05D000966 ORTHO05D004359 2.5e-12 75.5 44 77.3
CANSAT56G0447 Cannabis sativa HOM05D000966 ORTHO05D004359 1.3e-11 73.2 43 74.4
FvH4_2g27880 Fragaria vesca HOM05D000966 ORTHO05D004359 1.6e-11 72.8 44 77.3
ClCG08G006030 Citrullus lanatus HOM05D000966 ORTHO05D004359 2.2e-11 72.4 43 76.7
MELO3C008475.2 Cucumis melo HOM05D000966 ORTHO05D004359 2.2e-11 72.4 43 76.7
FAN15G1688 Fragaria x ananassa HOM05D000966 ORTHO05D004359 3.7e-11 71.6 43 76.7
FAN27G3367 Fragaria x ananassa HOM05D000966 ORTHO05D004359 3.7e-11 71.6 43 76.7
Lj7A351G47 Lonicera japonica HOM05D000966 ORTHO05D004359 3.7e-11 71.6 43 74.4
FAN24G3136 Fragaria x ananassa HOM05D000966 ORTHO05D004359 4.8e-11 71.2 44 75.0
Aa31LG4G7310 Aethionema arabicum HOM05D000966 ORTHO05D004359 6.3e-11 70.9 45 68.9
CsaV3_6G034050 Cucumis sativus L. HOM05D000966 ORTHO05D004359 6.3e-11 70.9 43 74.4
QL09p032394 Quercus lobata HOM05D000966 ORTHO05D004359 6.3e-11 70.9 43 74.4
Sed0009206 Sechium edule HOM05D000966 ORTHO05D004359 6.3e-11 70.9 43 74.4
Prupe.4G272200 Prunus persica HOM05D000966 ORTHO05D334098 8.2e-11 70.5 48 85.4
Cfa018425 Carpinus fangiana HOM05D000966 ORTHO05D004359 1.1e-10 70.1 43 76.7
Haze_17638 Corylus avellana HOM05D000966 ORTHO05D004359 1.1e-10 70.1 43 76.7
FAN20G2668 Fragaria x ananassa HOM05D000966 ORTHO05D004359 1.1e-10 70.1 43 74.4
TAR625G0972 Trochodendron aralioides HOM05D000966 ORTHO05D004359 1.1e-10 70.1 43 69.8
Ah.05g169110 Amaranthus hybridus HOM05D000966 ORTHO05D004359 1.8e-10 69.3 43 69.8
Nitab4.5_0005166g0010 Nicotiana tabacum HOM05D000966 ORTHO05D004359 1.8e-10 69.3 43 67.4
Hund26773 Selenicereus undatus HOM05D000966 ORTHO05D004359 1.8e-10 69.3 43 74.4
CiPaw.15G031200 Carya illinoinensis HOM05D000966 ORTHO05D004359 2.4e-10 68.9 43 74.4
RcHm_v2.0_Chr6g0296741 Rosa chinensis HOM05D000966 ORTHO05D004359 2.4e-10 68.9 43 74.4
Sed0004584 Sechium edule HOM05D000966 ORTHO05D004359 2.4e-10 68.9 43 72.1
CSS0042459 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D004359 4.1e-10 68.2 43 69.8
CiPaw.16G022600 Carya illinoinensis HOM05D000966 ORTHO05D004359 4.1e-10 68.2 43 74.4
Dinv14693 Davidia involucrata HOM05D000966 ORTHO05D004359 4.1e-10 68.2 45 71.1
Solyc04g057880.3 Solanum lycopersicum HOM05D000966 ORTHO05D004359 5.3e-10 67.8 41 73.2
Sopen04g025730 Solanum pennellii HOM05D000966 ORTHO05D004359 5.3e-10 67.8 41 73.2
SGA_v2.0_scaffold25G11140 Striga asiatica HOM05D000966 ORTHO05D004359 5.3e-10 67.8 43 69.8
AL2G37500 Arabidopsis lyrata HOM05D000966 ORTHO05D004359 6.9e-10 67.4 43 67.4
AT1G77300 Arabidopsis thaliana HOM05D000966 ORTHO05D004359 6.9e-10 67.4 43 67.4
BcaB05g25036 Brassica carinata HOM05D000966 ORTHO05D004359 6.9e-10 67.4 43 67.4
BcaC08g47620 Brassica carinata HOM05D000966 ORTHO05D004359 6.9e-10 67.4 43 67.4
A07p42840 Brassica napus HOM05D000966 ORTHO05D004359 6.9e-10 67.4 43 67.4
C06p51460 Brassica napus HOM05D000966 ORTHO05D004359 6.9e-10 67.4 43 67.4
BolC6t40164H Brassica oleracea HOM05D000966 ORTHO05D004359 6.9e-10 67.4 43 67.4
BraA07t31805Z Brassica rapa HOM05D000966 ORTHO05D004359 6.9e-10 67.4 43 67.4
Thhalv10017998m.g Eutrema salsugineum HOM05D000966 ORTHO05D004359 6.9e-10 67.4 43 67.4
Sp5g32470 Schrenkiella parvula HOM05D000966 ORTHO05D004359 6.9e-10 67.4 43 67.4
CAN.G531.16 Capsicum annuum HOM05D000966 ORTHO05D004359 9.0e-10 67.0 43 65.1
Nitab4.5_0000317g0220 Nicotiana tabacum HOM05D000966 ORTHO05D004359 9.0e-10 67.0 41 70.7
Nitab4.5_0003978g0030 Nicotiana tabacum HOM05D000966 ORTHO05D004359 9.0e-10 67.0 41 70.7
HPP92_016112 Vanilla planifolia HOM05D000966 ORTHO05D004359 9.0e-10 67.0 43 67.4
GSVIVG01008805001 Vitis vinifera HOM05D000966 ORTHO05D004359 9.0e-10 67.0 43 72.1
Actinidia21275 Actinidia chinensis HOM05D000966 ORTHO05D004359 1.2e-09 66.6 44 70.5
Aqoxy5G02416 Aquilegia oxysepala HOM05D000966 ORTHO05D004359 1.2e-09 66.6 43 67.4
MSTRG.1411 Avicennia marina HOM05D000966 ORTHO05D004359 1.2e-09 66.6 43 69.8
Eucgr.F03851 Eucalyptus grandis HOM05D000966 ORTHO05D004359 1.2e-09 66.6 43 65.1
Lalb_Chr08g0241051 Lupinus albus HOM05D000966 ORTHO05D004359 1.2e-09 66.6 43 69.8
Lalb_Chr23g0271181 Lupinus albus HOM05D000966 ORTHO05D004359 1.2e-09 66.6 43 69.8
Oeu015303.1 Olea europaea HOM05D000966 ORTHO05D004359 1.2e-09 66.6 43 67.4
SalBow7G2771 Salvia bowleyana HOM05D000966 ORTHO05D004359 1.2e-09 66.6 43 67.4
SGA_v2.0_scaffold28G11969 Striga asiatica HOM05D000966 ORTHO05D004359 1.2e-09 66.6 43 69.8
THA.LOC104812082 Tarenaya hassleriana HOM05D000966 ORTHO05D004359 1.2e-09 66.6 43 67.4
CAN.G716.14 Capsicum annuum HOM05D000966 ORTHO05D004359 1.5e-09 66.2 41 70.7
EL10Ac1g01359 Beta vulgaris HOM05D000966 ORTHO05D004359 2.0e-09 65.9 43 67.4
DCAR_016658 Daucus carota HOM05D000966 ORTHO05D004359 2.0e-09 65.9 43 69.8
Lalb_Chr11g0066181 Lupinus albus HOM05D000966 ORTHO05D004359 2.0e-09 65.9 43 69.8
THA.LOC104810214 Tarenaya hassleriana HOM05D000966 ORTHO05D004359 2.0e-09 65.9 43 65.1
arahy.Tifrunner.gnm1.ann1.P7B6WW Arachis hypogaea HOM05D000966 ORTHO05D004359 2.6e-09 65.5 43 67.4
arahy.Tifrunner.gnm1.ann1.Z22D2G Arachis hypogaea HOM05D000966 ORTHO05D004359 2.6e-09 65.5 43 67.4
Carub.0002s2418 Capsella rubella HOM05D000966 ORTHO05D004359 2.6e-09 65.5 43 65.1
Manes.18G082550 Manihot esculenta HOM05D000966 ORTHO05D004359 2.6e-09 65.5 43 67.4
Cc10_g13740 Coffea canephora HOM05D000966 ORTHO05D004359 3.4e-09 65.1 45 62.2
DCAR_014368 Daucus carota HOM05D000966 ORTHO05D004359 3.4e-09 65.1 42 69.0
Dinv27269 Davidia involucrata HOM05D000966 ORTHO05D004359 3.4e-09 65.1 43 67.4
SalBow7G0355 Salvia bowleyana HOM05D000966 ORTHO05D004359 3.4e-09 65.1 43 65.1
VMungo1309G2033 Vigna mungo HOM05D000966 ORTHO05D004359 4.5e-09 64.7 43 67.4
CDE02G1847 Ceratophyllum demersum HOM05D000966 ORTHO05D004359 5.9e-09 64.3 43 65.1
Lsat_1_v5_gn_6_110300 Lactuca sativa HOM05D000966 ORTHO05D004359 5.9e-09 64.3 43 67.4
CSS0026263 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D004359 7.6e-09 63.9 41 70.7
Cpa.g.sc26.315 Carica papaya HOM05D000966 ORTHO05D004359 7.6e-09 63.9 43 62.8
Glyma.04G245400 Glycine max HOM05D000966 ORTHO05D004359 7.6e-09 63.9 43 62.8
Peaxi162Scf00591g00715 Petunia axillaris HOM05D000966 ORTHO05D004359 7.6e-09 63.9 43 62.8
Actinidia15211 Actinidia chinensis HOM05D000966 ORTHO05D004359 1.0e-08 63.5 44 65.9
Migut.N03259 Erythranthe guttata HOM05D000966 ORTHO05D004359 1.0e-08 63.5 43 62.8
Hma1.2p1_0880F.1_g231805 Hydrangea macrophylla HOM05D000966 ORTHO05D004359 1.0e-08 63.5 42 69.0
Rhsim06G0088400 Rhododendron simsii HOM05D000966 ORTHO05D004359 1.0e-08 63.5 43 65.1
Sabra05G0138100 Salix brachista HOM05D000966 ORTHO05D004359 1.3e-08 63.2 43 67.4
SalBow2G0813 Salvia bowleyana HOM05D000966 ORTHO05D004359 1.3e-08 63.2 43 67.4
COL.COLO4_35487 Corchorus olitorius HOM05D000966 ORTHO05D004359 1.7e-08 62.8 43 62.8
Oeu040397.2 Olea europaea HOM05D000966 ORTHO05D004359 1.7e-08 62.8 43 65.1
unitig_747.g21497 Utricularia gibba HOM05D000966 ORTHO05D004359 1.7e-08 62.8 43 65.1
AUR62007714 Chenopodium quinoa HOM05D000966 ORTHO05D004359 2.2e-08 62.4 43 65.1
Sc26g0002860 Simmondsia chinensis HOM05D000966 ORTHO05D004359 2.2e-08 62.4 43 62.8
TWI32G0333 Tripterygium wilfordii HOM05D000966 ORTHO05D004359 2.2e-08 62.4 43 65.1
TAR381G1211 Trochodendron aralioides HOM05D000966 ORTHO05D004359 2.2e-08 62.4 43 62.8
Glyma.06G117700 Glycine max HOM05D000966 ORTHO05D004359 2.9e-08 62.0 43 60.5
PSO017G4997 Papaver somniferum HOM05D000966 ORTHO05D004359 3.8e-08 61.6 43 62.8
PSO170G5191 Papaver somniferum HOM05D000966 ORTHO05D004359 3.8e-08 61.6 43 62.8
Potri.002G079100 Populus trichocarpa HOM05D000966 ORTHO05D004359 3.8e-08 61.6 43 65.1
ATR0584G046 Amborella trichopoda HOM05D000966 ORTHO05D004359 5.0e-08 61.2 43 60.5
Solyc06g059960.4 Solanum lycopersicum HOM05D000966 ORTHO05D004359 5.0e-08 61.2 43 62.8
Sopen06g020060 Solanum pennellii HOM05D000966 ORTHO05D004359 5.0e-08 61.2 43 62.8
unitig_0.g2115 Utricularia gibba HOM05D000966 ORTHO05D004359 5.0e-08 61.2 43 62.8
AagrBONN_evm.TU.Sc2ySwM_228.2240 Anthoceros agrestis HOM05D000966 ORTHO05D004359 6.5e-08 60.8 43 62.8
AUR62013429 Chenopodium quinoa HOM05D000966 ORTHO05D004359 6.5e-08 60.8 43 62.8
PGR042G2231 Punica granatum HOM05D000966 ORTHO05D004359 8.5e-08 60.5 40 65.0
TWI60G1172 Tripterygium wilfordii HOM05D000966 ORTHO05D004359 8.5e-08 60.5 43 62.8
HanXRQChr05g0149781 Helianthus annuus HOM05D000966 ORTHO05D004359 1.1e-07 60.1 43 65.1
Nn5g28439 Nelumbo nucifera HOM05D000966 ORTHO05D004359 1.1e-07 60.1 39 64.1
CARHR070780 Cardamine hirsuta HOM05D000966 ORTHO05D004359 1.4e-07 59.7 41 63.4
Lj1g0026196 Lotus japonicus HOM05D000966 ORTHO05D004359 1.4e-07 59.7 41 63.4
TWI34G1216 Tripterygium wilfordii HOM05D000966 ORTHO05D004359 1.4e-07 59.7 43 62.8
Ciclev10000005m.g Citrus clementina HOM05D000966 ORTHO05D004359 1.9e-07 59.3 43 62.8
SEGI_29086 Sequoiadendron giganteum HOM05D000966 ORTHO05D004359 2.5e-07 58.9 43 55.8
COL.COLO4_36773 Corchorus olitorius HOM05D000966 ORTHO05D004359 3.2e-07 58.5 43 58.1
Manes.02G168600 Manihot esculenta HOM05D000966 ORTHO05D004359 3.2e-07 58.5 43 60.5
CDE08G1614 Ceratophyllum demersum HOM05D000966 ORTHO05D004359 4.2e-07 58.2 43 60.5
ECA246G3937 Erigeron canadensis HOM05D000966 ORTHO05D004359 4.2e-07 58.2 43 62.8
Os02g0554000 Oryza sativa ssp. japonica HOM05D000966 ORTHO05D004359 4.2e-07 58.2 41 63.4
SEGI_04625 Sequoiadendron giganteum HOM05D000966 ORTHO05D004359 4.2e-07 58.2 43 58.1
THA.LOC104809635 Tarenaya hassleriana HOM05D000966 ORTHO05D004359 4.2e-07 58.2 43 55.8
Thecc.08G133300 Theobroma cacao HOM05D000966 ORTHO05D004359 4.2e-07 58.2 43 60.5
Duzib041G0231 Durio zibethinus HOM05D000966 ORTHO05D004359 5.5e-07 57.8 43 60.5
Phvul.009G130100 Phaseolus vulgaris HOM05D000966 ORTHO05D004359 5.5e-07 57.8 40 65.0
Pp3c1_33770 Physcomitrium patens HOM05D000966 ORTHO05D004359 7.2e-07 57.4 50 54.0
Gohir.A05G238000 Gossypium hirsutum HOM05D000966 ORTHO05D004359 9.3e-07 57.0 43 58.1
Ca_16610_v3 Cicer arietinum L. HOM05D000966 ORTHO05D004359 1.6e-06 56.2 40 60.0
Nn1g08953 Nelumbo nucifera HOM05D000966 ORTHO05D004359 1.6e-06 56.2 38 63.2
CDE06G2822 Ceratophyllum demersum HOM05D000625 ORTHO05D004359 2.1e-06 55.8 43 55.8
Medtr3g088625 Medicago truncatula HOM05D000966 ORTHO05D004359 2.1e-06 55.8 40 60.0
Gohir.D05G240000 Gossypium hirsutum HOM05D000966 ORTHO05D004359 2.7e-06 55.5 43 58.1
Gorai.009G248900 Gossypium raimondii HOM05D000966 ORTHO05D004359 2.7e-06 55.5 43 58.1
Pp3c2_12540 Physcomitrium patens HOM05D000966 ORTHO05D004359 2.7e-06 55.5 50 52.0
Potri.005G182100 Populus trichocarpa HOM05D000966 ORTHO05D004359 2.7e-06 55.5 40 65.0
TPR.G21850 Trifolium pratense HOM05D000966 ORTHO05D004359 2.7e-06 55.5 40 60.0
MBI03_g13487_MAGBIO Magnolia biondii HOM05D000966 ORTHO05D004359 4.6e-06 54.7 43 58.1
Psat5g084600 Pisum sativum HOM05D000966 ORTHO05D004359 4.6e-06 54.7 40 57.5
Zm00001eb243610 Zea mays HOM05D000966 ORTHO05D004359 6.1e-06 54.3 41 58.5


User provided reference genes

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