Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 1.0e-255 886.3 467 100.0
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 7.2e-230 800.4 425 94.4
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 7.4e-227 790.4 467 89.3
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 6.3e-218 760.8 467 86.9
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 5.3e-217 757.7 469 84.0
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 9.1e-217 756.9 469 85.3
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 1.2e-213 746.5 474 85.7
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 2.3e-212 742.3 467 82.0
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 4.8e-210 734.6 469 82.5
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 7.0e-209 730.7 474 82.3
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 9.1e-209 730.3 469 83.8
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 1.2e-208 729.9 471 83.4
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 3.5e-208 728.4 471 81.3
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 2.3e-207 725.7 471 80.7
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 3.8e-207 724.9 467 83.1
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 1.6e-205 719.5 472 80.9
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 2.1e-205 719.2 469 81.0
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 1.4e-204 716.5 467 78.8
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 1.8e-204 716.1 470 82.1
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 6.8e-204 714.1 469 81.9
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 6.8e-204 714.1 469 82.5
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 2.0e-203 712.6 469 79.3
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 2.6e-203 712.2 469 79.3
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 5.7e-203 711.1 469 80.6
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 7.5e-203 710.7 467 79.9
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 9.8e-203 710.3 467 82.2
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 2.2e-202 709.1 469 81.2
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 2.8e-202 708.8 470 80.2
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 3.7e-202 708.4 469 80.8
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 1.1e-201 706.8 469 77.8
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 1.8e-201 706.1 470 81.1
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 3.2e-201 705.3 468 80.3
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 4.1e-201 704.9 469 78.0
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 5.4e-201 704.5 469 78.9
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 7.0e-201 704.1 469 81.0
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 2.0e-200 702.6 469 78.7
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 2.9e-199 698.7 494 76.3
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 8.6e-199 697.2 472 81.1
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.9e-198 696.0 469 77.0
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 3.3e-198 695.3 423 84.9
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 7.3e-198 694.1 469 75.9
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 7.3e-198 694.1 494 76.3
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 1.2e-197 693.3 472 80.7
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 2.8e-197 692.2 428 83.2
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 2.8e-197 692.2 468 76.1
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 3.1e-196 688.7 470 78.3
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.2e-195 686.8 468 77.4
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 1.2e-195 686.8 469 75.5
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.5e-195 686.4 467 77.1
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 3.4e-195 685.3 468 77.1
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 7.5e-195 684.1 469 75.7
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 9.8e-195 683.7 467 76.2
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 1.3e-194 683.3 467 76.2
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 2.2e-194 682.6 468 75.6
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 2.9e-194 682.2 441 81.2
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 1.4e-193 679.9 468 75.6
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 1.9e-193 679.5 448 80.8
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 2.4e-193 679.1 469 75.9
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 2.4e-193 679.1 469 76.5
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 5.4e-193 677.9 462 77.5
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 7.0e-193 677.6 475 74.7
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 9.2e-193 677.2 486 72.4
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 1.2e-192 676.8 476 75.2
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 1.6e-192 676.4 469 75.5
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 2.0e-192 676.0 474 76.2
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 6.0e-192 674.5 476 78.6
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 3.0e-191 672.2 469 75.5
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 8.6e-191 670.6 467 74.5
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 4.3e-190 668.3 500 73.0
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 5.6e-190 667.9 469 75.1
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 5.6e-190 667.9 469 75.1
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 5.6e-190 667.9 469 75.1
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 7.3e-190 667.5 469 75.7
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 9.5e-190 667.2 465 76.8
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 9.5e-190 667.2 468 75.4
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 1.2e-189 666.8 475 75.6
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 1.2e-189 666.8 476 76.9
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 2.8e-189 665.6 475 76.8
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 3.6e-189 665.2 476 76.9
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 6.2e-189 664.5 474 74.5
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 1.4e-188 663.3 468 75.2
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 1.8e-188 662.9 469 75.3
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 5.2e-188 661.4 471 73.7
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 5.2e-188 661.4 472 75.4
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 8.9e-188 660.6 469 74.4
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.6e-187 659.1 472 77.1
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 4.4e-187 658.3 470 74.3
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 9.8e-187 657.1 470 74.0
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.7e-186 656.4 471 77.3
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 1.4e-185 653.3 516 69.0
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 2.4e-185 652.5 469 73.3
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 2.1e-184 649.4 473 74.0
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 7.8e-184 647.5 469 74.2
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 1.3e-183 646.7 469 73.6
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 5.1e-183 644.8 469 72.7
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 9.5e-182 640.6 477 71.7
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 1.7e-178 629.8 425 75.1
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 6.4e-178 627.9 412 76.0
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 1.1e-177 627.1 429 75.1
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 5.4e-177 624.8 455 71.4
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 3.5e-176 622.1 470 69.4
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 1.5e-174 616.7 405 76.5
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 1.5e-174 616.7 468 70.3
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 2.8e-173 612.5 460 70.9
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 2.9e-170 602.4 466 68.2
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 3.9e-167 592.0 470 68.7
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 1.5e-166 590.1 422 74.9
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 1.2e-163 580.5 425 69.6
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 4.9e-162 575.1 462 65.8
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 3.2e-161 572.4 387 80.1
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 3.0e-159 565.8 404 73.0
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 2.1e-141 506.5 323 81.1
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 3.1e-140 502.7 405 63.7
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 9.7e-134 481.1 408 59.8
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 6.3e-133 478.4 416 59.6
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 7.0e-116 421.8 464 51.7
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 8.8e-103 378.3 281 68.0
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.4e-100 370.9 259 78.0
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 3.1e-100 369.8 419 51.3
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 7.2e-97 358.6 541 38.4
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 1.7e-77 294.3 269 63.9
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 2.0e-75 287.3 194 76.8
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 1.6e-67 261.2 255 62.0
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 2.1e-67 260.8 255 62.0
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 4.0e-55 219.9 213 62.0
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 1.4e-44 184.9 151 65.6
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 9.3e-44 182.2 161 63.4
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 1.3e-40 171.8 120 75.8
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 6.2e-40 169.5 154 62.3
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 8.7e-34 149.1 131 64.1
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 9.0e-31 139.0 400 30.0
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 1.1e-23 115.5 60 93.3
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 2.8e-16 90.9 57 78.9
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 6.3e-16 89.7 55 74.5
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 2.4e-15 87.8 68 75.0
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 7.4e-09 66.2 65 58.5


User provided reference genes

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