Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_12870 Physcomitrium patens HOM05D004870 ORTHO05D006061 1.8e-268 928.7 473 100.0
Pp3c15_6200 Physcomitrium patens HOM05D004870 ORTHO05D006061 1.7e-234 815.8 470 86.6
Mapoly0020s0155 Marchantia polymorpha HOM05D004870 ORTHO05D006061 9.3e-193 677.2 422 77.5
SMO351G0256 Selaginella moellendorffii HOM05D004870 ORTHO05D006061 1.2e-192 676.8 410 79.3
CDE05G3274 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 1.6e-181 639.8 428 73.1
ATR0618G304 Amborella trichopoda HOM05D004870 ORTHO05D006061 3.1e-180 635.6 408 74.8
Sc06g0006850 Simmondsia chinensis HOM05D004870 ORTHO05D006061 1.2e-179 633.6 438 72.1
THA.LOC104800685 Tarenaya hassleriana HOM05D004870 ORTHO05D006061 1.0e-178 630.6 454 69.8
HanXRQChr01g0018971 Helianthus annuus HOM05D004870 ORTHO05D006061 1.3e-178 630.2 441 72.3
CAN.G282.44 Capsicum annuum HOM05D004870 ORTHO05D006061 1.7e-178 629.8 420 74.3
Migut.N00083 Erythranthe guttata HOM05D004870 ORTHO05D006061 1.7e-178 629.8 440 71.4
PSO063G7087 Papaver somniferum HOM05D004870 ORTHO05D006061 5.0e-178 628.2 427 72.8
Prupe.4G061300 Prunus persica HOM05D004870 ORTHO05D006061 8.5e-178 627.5 409 75.6
PSO782G4799 Papaver somniferum HOM05D004870 ORTHO05D006061 1.9e-177 626.3 427 72.6
TAR629G3247 Trochodendron aralioides HOM05D004870 ORTHO05D006061 1.9e-177 626.3 409 73.8
CiPaw.05G171200 Carya illinoinensis HOM05D004870 ORTHO05D006061 3.2e-177 625.5 409 74.6
CSS0023232 Camellia sinensis var. sinensis HOM05D004870 ORTHO05D006061 4.2e-177 625.2 436 73.2
Dinv25387 Davidia involucrata HOM05D004870 ORTHO05D006061 4.2e-177 625.2 438 71.9
Manes.15G107800 Manihot esculenta HOM05D004870 ORTHO05D006061 7.2e-177 624.4 410 74.6
PSO339G5988 Papaver somniferum HOM05D004870 ORTHO05D006061 1.2e-176 623.6 409 74.6
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 1.6e-176 623.2 409 75.6
ClCG01G008090 Citrullus lanatus HOM05D004870 ORTHO05D006061 1.6e-176 623.2 409 74.1
PGSC0003DMG401016396 Solanum tuberosum HOM05D004870 ORTHO05D006061 1.6e-176 623.2 408 74.8
SGA_v2.0_scaffold91G28011 Striga asiatica HOM05D004870 ORTHO05D006061 1.6e-176 623.2 408 74.8
SalBow5G5328 Salvia bowleyana HOM05D004870 ORTHO05D006061 2.1e-176 622.9 408 74.5
Ah.08g211980 Amaranthus hybridus HOM05D004870 ORTHO05D006061 2.7e-176 622.5 451 69.0
Gohir.D02G189300 Gossypium hirsutum HOM05D004870 ORTHO05D006061 3.6e-176 622.1 416 73.8
Gorai.005G212000 Gossypium raimondii HOM05D004870 ORTHO05D006061 3.6e-176 622.1 416 73.8
Zm00001eb433680 Zea mays HOM05D004870 ORTHO05D006061 3.6e-176 622.1 419 73.5
Dinv17644 Davidia involucrata HOM05D004870 ORTHO05D006061 4.6e-176 621.7 443 70.7
QL03p045749 Quercus lobata HOM05D004870 ORTHO05D006061 4.6e-176 621.7 409 74.3
Actinidia04336 Actinidia chinensis HOM05D004870 ORTHO05D006061 6.1e-176 621.3 409 74.3
Potri.005G089700 Populus trichocarpa HOM05D004870 ORTHO05D006061 6.1e-176 621.3 450 68.7
Glyma.10G286200 Glycine max HOM05D004870 ORTHO05D006061 1.0e-175 620.5 409 74.1
ECA234G2132 Erigeron canadensis HOM05D004870 ORTHO05D006061 1.3e-175 620.2 409 74.6
Phvul.007G014700 Phaseolus vulgaris HOM05D004870 ORTHO05D006061 1.3e-175 620.2 409 74.3
Cc11_g00600 Coffea canephora HOM05D004870 ORTHO05D006061 1.8e-175 619.8 408 74.0
Lalb_Chr02g0143631 Lupinus albus HOM05D004870 ORTHO05D006061 1.8e-175 619.8 409 73.8
Sed0016006 Sechium edule HOM05D004870 ORTHO05D006061 1.8e-175 619.8 409 74.8
Gohir.A03G166000 Gossypium hirsutum HOM05D004870 ORTHO05D006061 2.3e-175 619.4 416 73.3
MELO3C005067.2 Cucumis melo HOM05D004870 ORTHO05D006061 3.0e-175 619.0 409 73.8
DCAR_026881 Daucus carota HOM05D004870 ORTHO05D006061 3.0e-175 619.0 419 72.3
Solyc01g008290.3 Solanum lycopersicum HOM05D004870 ORTHO05D006061 3.9e-175 618.6 408 74.0
Sopen01g003810 Solanum pennellii HOM05D004870 ORTHO05D006061 3.9e-175 618.6 408 74.0
VMungo0720G1992 Vigna mungo HOM05D004870 ORTHO05D006061 3.9e-175 618.6 409 74.3
MBI03_g13828_MAGBIO Magnolia biondii HOM05D004870 ORTHO05D006061 5.1e-175 618.2 429 71.3
TWI53G0925 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 5.1e-175 618.2 408 74.5
CsaV3_1G039280 Cucumis sativus L. HOM05D004870 ORTHO05D006061 6.7e-175 617.8 409 74.3
Aa31LG11G2760 Aethionema arabicum HOM05D004870 ORTHO05D006061 8.7e-175 617.5 457 67.4
AT5G23300 Arabidopsis thaliana HOM05D004870 ORTHO05D006061 8.7e-175 617.5 441 68.9
SGA_v2.0_scaffold428G51528 Striga asiatica HOM05D004870 ORTHO05D006061 8.7e-175 617.5 408 73.3
TWI74G1525 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 8.7e-175 617.5 409 74.1
Thhalv10004171m.g Eutrema salsugineum HOM05D004870 ORTHO05D006061 1.1e-174 617.1 441 68.9
Medtr1g114530 Medicago truncatula HOM05D004870 ORTHO05D006061 1.5e-174 616.7 409 73.6
Os04g0676300 Oryza sativa ssp. japonica HOM05D004870 ORTHO05D006061 1.5e-174 616.7 420 71.9
Sp2g23850 Schrenkiella parvula HOM05D004870 ORTHO05D006061 1.5e-174 616.7 441 68.9
Thecc.02G155600 Theobroma cacao HOM05D004870 ORTHO05D006061 1.5e-174 616.7 408 73.5
Eucgr.I02621 Eucalyptus grandis HOM05D004870 ORTHO05D006061 1.9e-174 616.3 409 73.3
Lj5g0006106 Lotus japonicus HOM05D004870 ORTHO05D006061 1.9e-174 616.3 409 73.8
Ca_11257_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 2.5e-174 615.9 408 74.0
TPR.G4052 Trifolium pratense HOM05D004870 ORTHO05D006061 2.5e-174 615.9 409 73.6
CsaV3_5G020740 Cucumis sativus L. HOM05D004870 ORTHO05D006061 3.3e-174 615.5 409 73.8
Ciclev10031476m.g Citrus clementina HOM05D004870 ORTHO05D006061 4.3e-174 615.1 450 70.4
HPP92_014771 Vanilla planifolia HOM05D004870 ORTHO05D006061 4.3e-174 615.1 409 72.9
BraA09t36349Z Brassica rapa HOM05D004870 ORTHO05D006061 5.7e-174 614.8 409 72.6
C07p44260 Brassica napus HOM05D004870 ORTHO05D006061 7.4e-174 614.4 409 72.9
BolC7t44949H Brassica oleracea HOM05D004870 ORTHO05D006061 7.4e-174 614.4 409 72.9
MD10G1280100 Malus domestica HOM05D004870 ORTHO05D006061 7.4e-174 614.4 408 73.0
A06p34260 Brassica napus HOM05D004870 ORTHO05D006061 1.3e-173 613.6 409 73.1
BraA06t26358Z Brassica rapa HOM05D004870 ORTHO05D006061 1.3e-173 613.6 409 73.1
Duzib132G1043 Durio zibethinus HOM05D004870 ORTHO05D006061 1.3e-173 613.6 408 73.5
Glyma.20G103100 Glycine max HOM05D004870 ORTHO05D006061 1.7e-173 613.2 409 72.9
CARHR190240 Cardamine hirsuta HOM05D004870 ORTHO05D006061 2.8e-173 612.5 409 72.9
Lsat_1_v5_gn_1_81660 Lactuca sativa HOM05D004870 ORTHO05D006061 2.8e-173 612.5 435 70.3
MD05G1301200 Malus domestica HOM05D004870 ORTHO05D006061 2.8e-173 612.5 408 72.5
A09p07010 Brassica napus HOM05D004870 ORTHO05D006061 3.7e-173 612.1 452 67.9
COL.COLO4_33098 Corchorus olitorius HOM05D004870 ORTHO05D006061 3.7e-173 612.1 441 69.2
Carub.0006s2107 Capsella rubella HOM05D004870 ORTHO05D006061 6.3e-173 611.3 441 68.3
Psat6g233800 Pisum sativum HOM05D004870 ORTHO05D006061 2.4e-172 609.4 408 73.5
AL6G34560 Arabidopsis lyrata HOM05D004870 ORTHO05D006061 3.1e-172 609.0 441 68.0
EL10Ac7g17331 Beta vulgaris HOM05D004870 ORTHO05D006061 3.1e-172 609.0 436 69.7
C09p07820 Brassica napus HOM05D004870 ORTHO05D006061 3.1e-172 609.0 409 72.1
BolC9t53698H Brassica oleracea HOM05D004870 ORTHO05D006061 3.1e-172 609.0 409 72.1
arahy.Tifrunner.gnm1.ann1.NQ58Z6 Arachis hypogaea HOM05D004870 ORTHO05D006061 4.1e-172 608.6 440 68.9
arahy.Tifrunner.gnm1.ann1.GVRL8L Arachis hypogaea HOM05D004870 ORTHO05D006061 5.3e-172 608.2 440 68.6
DCAR_002602 Daucus carota HOM05D004870 ORTHO05D006061 6.9e-172 607.8 465 67.3
RcHm_v2.0_Chr5g0010781 Rosa chinensis HOM05D004870 ORTHO05D006061 1.2e-171 607.1 419 71.1
Haze_11781 Corylus avellana HOM05D004870 ORTHO05D006061 1.5e-171 606.7 417 72.2
PGR142G2596 Punica granatum HOM05D004870 ORTHO05D006061 2.6e-171 605.9 411 72.5
Hund08594 Selenicereus undatus HOM05D004870 ORTHO05D006061 5.9e-171 604.7 477 65.4
FAN25G2081 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.0e-170 604.0 419 70.2
GSVIVG01026142001 Vitis vinifera HOM05D004870 ORTHO05D006061 1.3e-170 603.6 432 70.1
FvH4_3g07800 Fragaria vesca HOM05D004870 ORTHO05D006061 1.7e-170 603.2 420 70.5
FAN11G2678 Fragaria x ananassa HOM05D004870 ORTHO05D006061 2.2e-170 602.8 423 70.4
FAN16G1105 Fragaria x ananassa HOM05D004870 ORTHO05D006061 3.8e-170 602.1 420 70.2
FAN21G1781 Fragaria x ananassa HOM05D004870 ORTHO05D006061 6.5e-170 601.3 423 70.4
Lj3A847T44 Lonicera japonica HOM05D004870 ORTHO05D006061 1.1e-169 600.5 390 76.7
Oeu063362.5 Olea europaea HOM05D004870 ORTHO05D006061 1.8e-167 593.2 428 70.1
HanXRQChr01g0018951 Helianthus annuus HOM05D004870 ORTHO05D006061 6.7e-167 591.3 435 69.0
Sabra05G0073800 Salix brachista HOM05D004870 ORTHO05D006061 6.7e-167 591.3 490 61.6
Rhsim09G0069200 Rhododendron simsii HOM05D004870 ORTHO05D006061 2.6e-166 589.3 435 68.5
Cfa008769 Carpinus fangiana HOM05D004870 ORTHO05D006061 5.7e-166 588.2 391 73.4
AUR62030167 Chenopodium quinoa HOM05D004870 ORTHO05D006061 9.1e-164 580.9 381 74.0
Atru.chr11.1102 Acer truncatum HOM05D004870 ORTHO05D006061 1.0e-162 577.4 417 69.3
Atru.chr11.1106 Acer truncatum HOM05D004870 ORTHO05D006061 1.0e-162 577.4 417 69.3
AUR62002708 Chenopodium quinoa HOM05D004870 ORTHO05D006061 6.5e-162 574.7 381 73.0
CBR_g49488 Chara braunii HOM05D004870 ORTHO05D006061 3.2e-161 572.4 432 63.2
unitig_749.g13388 Utricularia gibba HOM05D004870 ORTHO05D006061 6.1e-160 568.2 408 68.6
ECA248G2791 Erigeron canadensis HOM05D004870 ORTHO05D006061 8.0e-160 567.8 437 66.4
Lsat_1_v5_gn_1_81640 Lactuca sativa HOM05D004870 ORTHO05D006061 2.3e-159 566.2 399 70.7
Nitab4.5_0006274g0020 Nicotiana tabacum HOM05D004870 ORTHO05D006061 5.2e-159 565.1 384 73.2
BcaB04g19879 Brassica carinata HOM05D004870 ORTHO05D006061 7.0e-156 554.7 442 63.6
BcaC04g23488 Brassica carinata HOM05D004870 ORTHO05D006061 8.0e-152 541.2 408 66.2
QL06p048547 Quercus lobata HOM05D004870 ORTHO05D006061 4.0e-151 538.9 478 59.8
Prupe.6G003700 Prunus persica HOM05D004870 ORTHO05D006061 4.5e-147 525.4 409 66.0
Nn3g18601 Nelumbo nucifera HOM05D004870 ORTHO05D006061 5.9e-147 525.0 352 73.3
Peaxi162Scf00021g02316 Petunia axillaris HOM05D004870 ORTHO05D006061 1.5e-145 520.4 419 64.7
CBR_g53542 Chara braunii HOM05D004870 ORTHO05D006061 2.7e-144 516.2 431 59.6
SHI28437 Sapria himalayana HOM05D004870 ORTHO05D006061 2.0e-142 510.0 358 70.4
Duzib248G0882 Durio zibethinus HOM05D004870 ORTHO05D006061 4.5e-139 498.8 412 62.6
Nitab4.5_0000069g0140 Nicotiana tabacum HOM05D004870 ORTHO05D006061 2.9e-138 496.1 421 62.0
AagrBONN_evm.TU.Sc2ySwM_228.5917 Anthoceros agrestis HOM05D004870 ORTHO05D006061 1.9e-129 466.8 437 57.0
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 2.8e-128 463.0 329 69.9
Cre03.g199423 Chlamydomonas reinhardtii HOM05D004870 ORTHO05D006061 4.6e-123 445.7 374 60.2
AagrBONN_evm.TU.Sc2ySwM_340.305 Anthoceros agrestis HOM05D004870 ORTHO05D006061 8.3e-117 424.9 259 80.3
MELO3C015352.2 Cucumis melo HOM05D004870 ORTHO05D006061 1.9e-116 423.7 284 73.2
vmacro15993 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 1.6e-112 410.6 555 45.8
MCO08G060 Micromonas commoda HOM05D004870 ORTHO05D006061 2.0e-110 403.7 447 49.9
PSO339G2837 Papaver somniferum HOM05D004870 ORTHO05D006061 3.1e-95 353.2 351 54.1
Haze_27018 Corylus avellana HOM05D004870 ORTHO05D006061 6.2e-80 302.4 414 42.8
Potri.007G074201 Populus trichocarpa HOM05D004870 ORTHO05D006061 2.9e-77 293.5 207 68.6
Thecc.02G156000 Theobroma cacao HOM05D004870 ORTHO05D006061 1.2e-70 271.6 172 77.3
Potri.007G074101 Populus trichocarpa HOM05D004870 ORTHO05D006061 8.4e-69 265.4 187 70.1
Ca_29057_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 9.0e-63 245.4 357 40.1
SEGI_23530 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 1.2e-62 245.0 177 66.1
PSO782G3529 Papaver somniferum HOM05D004870 ORTHO05D006061 1.4e-60 238.0 254 51.2
Cfa021670 Carpinus fangiana HOM05D004870 ORTHO05D006061 2.8e-48 197.2 471 33.5
SEGI_39125 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 3.5e-46 190.3 116 74.1
vmacro15994 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 6.8e-26 122.9 71 77.5
RcHm_v2.0_Chr5g0064321 Rosa chinensis HOM05D004870 ORTHO05D006061 1.7e-24 118.2 81 76.5
Thecc.02G156100 Theobroma cacao HOM05D004870 ORTHO05D006061 8.3e-24 115.9 68 77.9
C08p27210 Brassica napus HOM05D004870 ORTHO05D006061 3.8e-21 107.1 78 59.0
C04p22220 Brassica napus HOM05D004870 ORTHO05D006061 6.6e-21 106.3 116 51.7
BcaC02g11010 Brassica carinata HOM05D004870 ORTHO05D006061 7.2e-20 102.8 75 62.7
RcHm_v2.0_Chr5g0050031 Rosa chinensis HOM05D004870 ORTHO05D006061 2.3e-18 97.8 66 80.3
PGR142G1834 Punica granatum HOM05D004870 ORTHO05D006061 1.0e-13 82.4 59 78.0
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 3.9e-13 80.5 301 26.2
arahy.Tifrunner.gnm1.ann1.7S4D4S Arachis hypogaea HOM05D004870 ORTHO05D000194 1.1e-07 62.4 61 57.4


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