Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.6e-89 332.0 169 100.0
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 3.7e-83 311.6 169 94.7
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 2.4e-50 202.6 163 63.2
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 4.1e-50 201.8 163 62.0
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 4.1e-50 201.8 163 62.0
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 5.3e-50 201.4 163 62.0
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 9.1e-50 200.7 165 62.4
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 1.6e-49 199.9 163 62.6
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 2.7e-49 199.1 164 63.4
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 2.7e-49 199.1 163 62.6
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 3.5e-49 198.7 165 61.2
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 3.5e-49 198.7 163 60.1
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 3.5e-49 198.7 163 59.5
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 3.5e-49 198.7 163 63.2
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 7.7e-49 197.6 162 61.1
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 7.7e-49 197.6 163 61.3
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 1.0e-48 197.2 163 62.6
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 1.0e-48 197.2 163 62.6
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 1.0e-48 197.2 163 62.6
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.3e-48 196.8 163 62.6
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.3e-48 196.8 163 62.6
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 1.7e-48 196.4 163 61.3
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 2.2e-48 196.1 163 62.0
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 3.8e-48 195.3 163 62.0
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 5.0e-48 194.9 163 59.5
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 5.0e-48 194.9 163 60.7
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 6.5e-48 194.5 163 60.7
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 6.5e-48 194.5 163 60.7
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 6.5e-48 194.5 163 60.1
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 8.5e-48 194.1 163 61.3
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 8.5e-48 194.1 163 60.7
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 8.5e-48 194.1 167 61.7
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 8.5e-48 194.1 165 61.2
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 1.1e-47 193.7 163 58.3
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 1.9e-47 193.0 163 59.5
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 1.9e-47 193.0 165 58.8
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 1.9e-47 193.0 165 58.8
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 2.5e-47 192.6 163 59.5
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 2.5e-47 192.6 163 58.9
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 2.5e-47 192.6 163 58.9
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 3.2e-47 192.2 163 62.0
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 5.5e-47 191.4 163 58.9
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 5.5e-47 191.4 163 60.7
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 7.2e-47 191.0 163 60.1
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 7.2e-47 191.0 163 59.5
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 7.2e-47 191.0 163 59.5
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 1.2e-46 190.3 163 58.3
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 1.2e-46 190.3 163 58.3
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.2e-46 190.3 163 59.5
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.2e-46 190.3 163 59.5
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 2.1e-46 189.5 163 59.5
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 2.1e-46 189.5 163 60.7
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 2.7e-46 189.1 163 60.7
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 2.7e-46 189.1 168 60.7
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 4.7e-46 188.3 162 59.9
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 4.7e-46 188.3 163 58.3
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 4.7e-46 188.3 163 58.9
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 8.0e-46 187.6 163 60.1
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 8.0e-46 187.6 163 60.1
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 8.0e-46 187.6 163 58.9
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 1.4e-45 186.8 163 58.9
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 1.4e-45 186.8 163 60.1
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.4e-45 186.8 163 60.1
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 1.4e-45 186.8 165 58.2
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.8e-45 186.4 163 58.9
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 2.3e-45 186.0 163 61.3
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 3.0e-45 185.7 163 58.3
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 4.0e-45 185.3 163 58.3
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.0e-45 185.3 163 60.1
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 4.0e-45 185.3 163 56.4
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 6.8e-45 184.5 163 60.1
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.0e-44 183.0 163 59.5
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 2.6e-44 182.6 163 58.3
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 2.6e-44 182.6 168 56.0
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 2.6e-44 182.6 163 58.3
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 4.4e-44 181.8 164 59.1
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 5.7e-44 181.4 163 56.4
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 1.7e-43 179.9 162 57.4
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 2.2e-43 179.5 163 59.5
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.1e-42 177.2 160 60.0
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 1.4e-42 176.8 141 66.0
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 3.1e-42 175.6 171 53.2
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 3.1e-42 175.6 166 53.0
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 5.9e-41 171.4 166 54.8
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 5.9e-41 171.4 162 56.2
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 1.3e-40 170.2 162 55.6
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.7e-40 169.9 162 54.3
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 1.7e-40 169.9 166 54.8
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 1.7e-40 169.9 166 54.8
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 2.3e-40 169.5 175 53.7
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 3.8e-40 168.7 166 52.4
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 6.6e-40 167.9 163 56.4
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 6.6e-40 167.9 163 56.4
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 6.6e-40 167.9 163 56.4
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 6.6e-40 167.9 162 55.6
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 6.6e-40 167.9 165 55.2
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 8.6e-40 167.5 163 55.8
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 1.5e-39 166.8 166 54.2
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.9e-39 166.4 162 54.3
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 2.5e-39 166.0 168 53.6
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 2.5e-39 166.0 166 51.8
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 2.5e-39 166.0 166 51.8
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 4.2e-39 165.2 165 54.5
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 9.5e-39 164.1 162 53.1
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 1.2e-38 163.7 164 51.2
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 3.6e-38 162.2 162 52.5
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 8.0e-38 161.0 162 53.1
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 1.4e-37 160.2 154 52.6
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.4e-37 160.2 166 52.4
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 8.9e-37 157.5 164 53.7
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 7.5e-36 154.5 139 56.8
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 5.0e-32 141.7 140 54.3
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 6.1e-30 134.8 126 54.8
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 3.7e-27 125.6 113 54.0
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 1.9e-23 113.2 81 67.9
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 3.3e-23 112.5 113 51.3
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 1.1e-21 107.5 87 59.8
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 1.5e-20 103.6 176 38.1
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 2.0e-20 103.2 89 60.7
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 3.5e-17 92.4 82 58.5
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 3.0e-08 62.8 42 73.8
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 9.5e-07 57.8 50 52.0


User provided reference genes

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