Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 3.8e-280 967.6 515 100.0
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 2.0e-140 503.4 452 62.2
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 5.0e-75 286.2 517 36.0
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 1.1e-61 241.9 535 32.5
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 1.6e-49 201.4 518 29.9
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 1.1e-48 198.7 520 31.0
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 1.1e-48 198.7 520 30.2
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 7.6e-47 192.6 500 30.6
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 9.9e-47 192.2 520 29.2
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 8.4e-46 189.1 435 31.0
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 7.1e-45 186.0 499 30.3
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 7.1e-45 186.0 509 28.1
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 1.2e-44 185.3 517 29.8
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 1.6e-44 184.9 493 29.8
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 2.1e-44 184.5 515 28.9
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 2.7e-44 184.1 517 28.4
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 3.5e-44 183.7 495 29.1
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 3.5e-44 183.7 517 28.0
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 6.0e-44 183.0 495 29.1
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 7.8e-44 182.6 492 29.1
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 2.3e-43 181.0 498 28.7
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 2.3e-43 181.0 499 29.3
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 2.3e-43 181.0 516 29.5
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 3.0e-43 180.6 498 29.3
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 6.6e-43 179.5 496 28.2
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 8.7e-43 179.1 497 28.0
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 8.7e-43 179.1 512 30.9
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 1.1e-42 178.7 502 28.9
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 1.5e-42 178.3 520 29.4
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 1.9e-42 177.9 495 28.3
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 5.6e-42 176.4 501 29.5
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 5.6e-42 176.4 497 28.4
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 7.3e-42 176.0 497 28.6
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 7.3e-42 176.0 498 29.7
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 7.3e-42 176.0 498 30.1
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 9.6e-42 175.6 494 27.7
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 2.8e-41 174.1 522 28.5
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 2.8e-41 174.1 521 27.4
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 3.6e-41 173.7 521 29.4
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 3.6e-41 173.7 512 27.3
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 6.2e-41 172.9 507 28.0
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 1.1e-40 172.2 505 28.1
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 1.4e-40 171.8 508 28.3
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 5.3e-40 169.9 517 27.9
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 1.2e-39 168.7 405 29.9
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 2.6e-39 167.5 494 28.5
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 5.8e-39 166.4 434 29.7
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.3e-38 165.2 496 28.6
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 2.9e-38 164.1 526 27.8
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 4.9e-38 163.3 500 28.0
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 8.4e-38 162.5 497 28.4
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 1.4e-37 161.8 443 28.7
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 1.9e-37 161.4 521 27.3
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.4e-37 161.0 495 28.3
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 3.2e-37 160.6 519 27.9
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 3.2e-37 160.6 499 27.9
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 3.2e-37 160.6 523 27.3
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 5.4e-37 159.8 521 27.6
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 5.4e-37 159.8 401 28.9
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 7.1e-37 159.5 373 30.3
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 7.1e-37 159.5 426 28.6
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 9.3e-37 159.1 512 27.5
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 4.6e-36 156.8 493 26.6
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 7.9e-36 156.0 373 30.0
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 3.9e-35 153.7 516 25.8
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.1e-35 153.3 371 30.7
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.5e-34 151.8 522 26.2
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 1.5e-34 151.8 547 25.8
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 4.3e-34 150.2 500 27.8
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 4.3e-34 150.2 495 28.9
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 9.6e-34 149.1 574 26.5
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 1.3e-33 148.7 499 27.9
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 1.6e-33 148.3 520 26.0
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 2.8e-33 147.5 347 31.4
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 3.6e-33 147.1 590 26.1
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 6.2e-33 146.4 528 27.1
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 1.5e-31 141.7 521 27.1
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.6e-31 141.0 375 29.1
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 2.6e-31 141.0 521 24.8
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 2.9e-30 137.5 519 26.8
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 6.4e-30 136.3 531 26.4
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 4.2e-29 133.7 369 30.1
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 1.6e-28 131.7 274 35.0
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 6.0e-28 129.8 260 33.5
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 1.3e-27 128.6 516 25.4
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 1.3e-27 128.6 492 26.6
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 8.7e-27 125.9 519 25.6
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 1.1e-26 125.6 585 22.4
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 1.9e-26 124.8 220 33.2
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 4.3e-26 123.6 515 24.3
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 8.1e-25 119.4 116 46.6
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 3.1e-24 117.5 519 23.3
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 3.4e-23 114.0 436 27.1
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 2.9e-22 110.9 519 23.7
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 1.1e-21 109.0 412 25.5
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 1.4e-21 108.6 440 26.6
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 1.4e-21 108.6 458 25.5
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 2.7e-20 104.4 426 25.8
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 5.1e-19 100.1 454 24.4
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 6.7e-19 99.8 153 37.3
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 6.7e-19 99.8 268 27.6
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 7.4e-18 96.3 221 30.3
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 1.1e-16 92.4 294 27.9
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.3e-16 90.1 86 50.0
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 2.0e-15 88.2 231 27.7
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 2.4e-08 64.7 332 24.1


User provided reference genes

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