Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_13820 Physcomitrium patens HOM05D000268 ORTHO05D307974 2.3e-72 275.4 131 100.0
Pp3c2_30830 Physcomitrium patens HOM05D000268 ORTHO05D000261 5.8e-36 154.5 110 70.0
Pp3c2_30835 Physcomitrium patens HOM05D000268 ORTHO05D000261 5.8e-36 154.5 110 70.0
Phvul.002G001600 Phaseolus vulgaris HOM05D000268 ORTHO05D000261 7.2e-10 67.8 126 34.9
Cc07_g17600 Coffea canephora HOM05D000268 ORTHO05D000261 2.7e-09 65.9 102 37.3
Glyma.11G038000 Glycine max HOM05D000268 ORTHO05D000261 3.5e-09 65.5 101 35.6
Lalb_Chr09g0324171 Lupinus albus HOM05D000268 ORTHO05D000261 6.1e-09 64.7 127 32.3
VMungo1215G3238 Vigna mungo HOM05D000268 ORTHO05D000261 6.1e-09 64.7 127 33.1
Ca_24610_v3 Cicer arietinum L. HOM05D000268 ORTHO05D000261 7.9e-09 64.3 103 37.9
Medtr4g010830 Medicago truncatula HOM05D000268 ORTHO05D000261 1.8e-08 63.2 127 33.9
arahy.Tifrunner.gnm1.ann1.LAJ77U Arachis hypogaea HOM05D000268 ORTHO05D000261 2.3e-08 62.8 129 32.6
arahy.Tifrunner.gnm1.ann1.Z9SRR3 Arachis hypogaea HOM05D000268 ORTHO05D000261 2.3e-08 62.8 129 32.6
SEGI_16515 Sequoiadendron giganteum HOM05D000268 ORTHO05D000261 2.3e-08 62.8 120 36.7
Eucgr.E00362 Eucalyptus grandis HOM05D000268 ORTHO05D000261 3.0e-08 62.4 101 35.6
Glyma.01G204900 Glycine max HOM05D000268 ORTHO05D000261 3.9e-08 62.0 101 34.7
Aqoxy1G01945 Aquilegia oxysepala HOM05D000268 ORTHO05D000261 5.1e-08 61.6 102 33.3
Solyc03g093760.1 Solanum lycopersicum HOM05D000268 ORTHO05D000261 6.7e-08 61.2 103 35.0
COL.COLO4_26875 Corchorus olitorius HOM05D000268 ORTHO05D000261 8.7e-08 60.8 108 35.2
CSS0043456 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D000261 1.5e-07 60.1 103 37.9
Rhsim07G0119200 Rhododendron simsii HOM05D000268 ORTHO05D000261 1.5e-07 60.1 103 37.9
TWI81G0682 Tripterygium wilfordii HOM05D000268 ORTHO05D000261 1.5e-07 60.1 102 34.3
vmacro12434 Vaccinium macrocarpon HOM05D000268 ORTHO05D000261 1.5e-07 60.1 107 37.4
DCAR_003703 Daucus carota HOM05D000268 ORTHO05D000261 1.9e-07 59.7 111 37.8
Medtr4g010550 Medicago truncatula HOM05D000268 ORTHO05D000261 1.9e-07 59.7 95 37.9
Sed0022367 Sechium edule HOM05D000268 ORTHO05D000261 2.5e-07 59.3 123 33.3
Hma1.2p1_1305F.1_g274550 Hydrangea macrophylla HOM05D000268 ORTHO05D000261 3.3e-07 58.9 112 33.0
Oeu019407.1 Olea europaea HOM05D000268 ORTHO05D000261 3.3e-07 58.9 103 37.9
Pp3c20_6140 Physcomitrium patens HOM05D000268 ORTHO05D000261 3.3e-07 58.9 105 40.0
Hund11320 Selenicereus undatus HOM05D000268 ORTHO05D000261 3.3e-07 58.9 103 35.0
Solyc03g093700.3 Solanum lycopersicum HOM05D000268 ORTHO05D000261 3.3e-07 58.9 103 34.0
TAR629G0829 Trochodendron aralioides HOM05D000268 ORTHO05D000261 3.3e-07 58.9 101 33.7
Ciclev10023329m.g Citrus clementina HOM05D000268 ORTHO05D000261 4.3e-07 58.5 103 36.9
Sopen03g024610 Solanum pennellii HOM05D000268 ORTHO05D000261 4.3e-07 58.5 103 34.0
Haze_00719 Corylus avellana HOM05D000268 ORTHO05D000261 5.7e-07 58.2 102 35.3
Nitab4.5_0004457g0040 Nicotiana tabacum HOM05D000268 ORTHO05D000261 5.7e-07 58.2 127 31.5
TAR636G1200 Trochodendron aralioides HOM05D000268 ORTHO05D000261 5.7e-07 58.2 103 34.0
Atru.chr9.1218 Acer truncatum HOM05D000268 ORTHO05D000261 7.4e-07 57.8 103 35.0
MBI04_g13848_MAGBIO Magnolia biondii HOM05D000268 ORTHO05D000261 7.4e-07 57.8 106 36.8
Peaxi162Scf01305g00010 Petunia axillaris HOM05D000268 ORTHO05D000261 7.4e-07 57.8 101 31.7
PGSC0003DMG400021004 Solanum tuberosum HOM05D000268 ORTHO05D000261 7.4e-07 57.8 103 34.0
Zm00001eb098590 Zea mays HOM05D000268 ORTHO05D000261 7.4e-07 57.8 103 35.9
Hma1.2p1_1014F.1_g247980 Hydrangea macrophylla HOM05D000268 ORTHO05D000261 9.7e-07 57.4 102 35.3
Nitab4.5_0000103g0420 Nicotiana tabacum HOM05D000268 ORTHO05D000261 9.7e-07 57.4 102 35.3
Nitab4.5_0001293g0020 Nicotiana tabacum HOM05D000268 ORTHO05D000261 9.7e-07 57.4 108 33.3
Aqoxy3G03217 Aquilegia oxysepala HOM05D000268 ORTHO05D000261 1.3e-06 57.0 102 31.4
ECA240G0681 Erigeron canadensis HOM05D000268 ORTHO05D000261 1.3e-06 57.0 127 29.1
MBI19_g25013_MAGBIO Magnolia biondii HOM05D000268 ORTHO05D000261 1.3e-06 57.0 119 35.3
unitig_0.g2513 Utricularia gibba HOM05D000268 ORTHO05D000261 1.3e-06 57.0 103 33.0
EL10Ac3g07144 Beta vulgaris HOM05D000268 ORTHO05D000261 1.6e-06 56.6 103 35.0
CAN.G247.2 Capsicum annuum HOM05D000268 ORTHO05D000261 1.6e-06 56.6 108 32.4
CsaV3_3G002320 Cucumis sativus L. HOM05D000268 ORTHO05D000261 1.6e-06 56.6 103 35.0
FAN13G2621 Fragaria x ananassa HOM05D000268 ORTHO05D000261 1.6e-06 56.6 103 35.9
RcHm_v2.0_Chr7g0215601 Rosa chinensis HOM05D000268 ORTHO05D000261 1.6e-06 56.6 103 35.0
Cfa015776 Carpinus fangiana HOM05D000268 ORTHO05D000261 2.2e-06 56.2 102 35.3
MELO3C013901.2 Cucumis melo HOM05D000268 ORTHO05D000261 2.2e-06 56.2 103 34.0
DCAR_009461 Daucus carota HOM05D000268 ORTHO05D000261 2.2e-06 56.2 104 36.5
Lj2C228T5 Lonicera japonica HOM05D000268 ORTHO05D000261 2.2e-06 56.2 102 34.3
PSO017G3826 Papaver somniferum HOM05D000268 ORTHO05D000261 2.2e-06 56.2 103 33.0
Sp4g01730 Schrenkiella parvula HOM05D000268 ORTHO05D000261 2.2e-06 56.2 107 33.6
TWI60G1215 Tripterygium wilfordii HOM05D000268 ORTHO05D000261 2.2e-06 56.2 103 35.0
HPP92_014399 Vanilla planifolia HOM05D000268 ORTHO05D000261 2.2e-06 56.2 102 36.3
SHI35546 Sapria himalayana HOM05D000268 ORTHO05D000261 2.8e-06 55.8 103 35.0
CiPaw.12G053300 Carya illinoinensis HOM05D000268 ORTHO05D000261 3.7e-06 55.5 103 35.9
Dinv34546 Davidia involucrata HOM05D000268 ORTHO05D000261 3.7e-06 55.5 102 36.3
Nn7g37136 Nelumbo nucifera HOM05D000268 ORTHO05D000261 3.7e-06 55.5 105 34.3
Oeu027159.1 Olea europaea HOM05D000268 ORTHO05D000261 3.7e-06 55.5 104 35.6
Zm00001eb042640 Zea mays HOM05D000268 ORTHO05D000261 3.7e-06 55.5 108 33.3
MD11G1279700 Malus domestica HOM05D000268 ORTHO05D000261 4.8e-06 55.1 103 35.0
PGSC0003DMG400021006 Solanum tuberosum HOM05D000268 ORTHO05D000261 4.8e-06 55.1 103 32.0
FAN18G1186 Fragaria x ananassa HOM05D000268 ORTHO05D000261 6.3e-06 54.7 102 35.3
PGSC0003DMG400031306 Solanum tuberosum HOM05D000268 ORTHO05D000261 8.2e-06 54.3 103 32.0


User provided reference genes

Program Settings