Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 5.7e-163 577.8 349 100.0
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 3.4e-67 259.6 247 53.0
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 4.9e-66 255.8 244 52.9
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 9.3e-65 251.5 210 57.1
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 2.7e-64 250.0 243 52.7
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 4.6e-64 249.2 206 55.8
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 1.3e-63 247.7 202 60.4
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 3.0e-63 246.5 246 50.8
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 8.7e-63 245.0 251 49.4
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 8.7e-63 245.0 248 50.8
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 8.7e-63 245.0 249 51.4
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 1.9e-62 243.8 202 56.9
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 2.5e-62 243.4 209 56.9
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 2.5e-62 243.4 209 56.9
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 3.3e-62 243.0 248 50.4
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 5.6e-62 242.3 209 56.5
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 5.6e-62 242.3 202 55.9
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 5.6e-62 242.3 245 51.8
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 9.6e-62 241.5 260 49.6
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 1.6e-61 240.7 241 51.0
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 1.6e-61 240.7 201 55.2
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 2.1e-61 240.4 249 49.4
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 2.8e-61 240.0 203 56.7
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 3.7e-61 239.6 248 51.2
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 4.8e-61 239.2 245 50.2
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 6.2e-61 238.8 250 51.2
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 6.2e-61 238.8 251 49.8
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 1.1e-60 238.0 197 57.4
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 1.4e-60 237.7 242 50.4
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 1.4e-60 237.7 202 54.5
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 1.8e-60 237.3 197 57.4
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 1.8e-60 237.3 202 53.5
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 1.8e-60 237.3 253 47.4
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 1.8e-60 237.3 222 52.7
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 2.4e-60 236.9 254 48.4
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 2.4e-60 236.9 197 54.8
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 3.1e-60 236.5 210 52.9
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 4.0e-60 236.1 236 50.8
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 5.3e-60 235.7 208 55.8
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 5.3e-60 235.7 253 48.6
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 5.3e-60 235.7 253 50.6
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 6.9e-60 235.3 250 48.4
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 6.9e-60 235.3 197 56.9
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 6.9e-60 235.3 255 50.6
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 1.5e-59 234.2 247 49.0
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 1.5e-59 234.2 238 50.4
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 1.5e-59 234.2 252 48.4
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 1.5e-59 234.2 251 49.8
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 2.6e-59 233.4 247 48.6
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 2.6e-59 233.4 245 50.6
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 2.6e-59 233.4 260 48.8
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 2.6e-59 233.4 214 53.7
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 2.6e-59 233.4 222 54.5
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 3.4e-59 233.0 204 55.4
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 3.4e-59 233.0 197 55.8
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 4.5e-59 232.6 248 48.8
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 4.5e-59 232.6 248 48.8
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 4.5e-59 232.6 248 48.8
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 4.5e-59 232.6 248 48.8
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 4.5e-59 232.6 209 54.1
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 4.5e-59 232.6 252 48.4
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 4.5e-59 232.6 252 48.4
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 4.5e-59 232.6 209 54.1
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 4.5e-59 232.6 244 47.1
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 5.8e-59 232.3 212 52.4
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 5.8e-59 232.3 251 49.4
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 7.6e-59 231.9 247 49.4
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 1.0e-58 231.5 243 48.6
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 2.2e-58 230.3 233 48.1
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 2.2e-58 230.3 224 50.4
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 2.9e-58 229.9 248 48.0
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 2.9e-58 229.9 266 46.2
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 3.8e-58 229.6 216 51.9
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 4.9e-58 229.2 247 46.6
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 4.9e-58 229.2 204 53.4
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 6.5e-58 228.8 245 49.4
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 6.5e-58 228.8 243 49.0
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 8.4e-58 228.4 251 47.4
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 8.4e-58 228.4 209 52.2
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 8.4e-58 228.4 245 50.6
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 1.1e-57 228.0 245 48.2
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 1.1e-57 228.0 216 51.9
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 1.1e-57 228.0 247 47.8
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 1.4e-57 227.6 215 51.2
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.4e-57 227.6 249 48.2
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 2.5e-57 226.9 215 51.2
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 4.2e-57 226.1 251 48.2
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 4.2e-57 226.1 193 57.5
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 5.5e-57 225.7 248 46.8
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 5.5e-57 225.7 248 46.4
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 7.1e-57 225.3 226 48.7
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 7.1e-57 225.3 219 49.3
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 9.3e-57 224.9 204 52.9
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 1.2e-56 224.6 206 51.5
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 1.6e-56 224.2 230 49.6
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 1.6e-56 224.2 247 47.0
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 2.7e-56 223.4 233 46.8
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 4.6e-56 222.6 223 48.9
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 4.6e-56 222.6 223 48.9
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 6.0e-56 222.2 197 52.3
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 6.0e-56 222.2 215 49.8
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 6.0e-56 222.2 215 49.8
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 8.7e-55 218.4 211 50.7
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 5.7e-54 215.7 170 60.0
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 9.7e-54 214.9 271 42.8
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 3.7e-53 213.0 260 46.9
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 8.2e-53 211.8 283 42.0
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 1.8e-52 210.7 245 45.3
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 5.9e-51 205.7 278 45.0
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 3.2e-49 199.9 248 42.7
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 2.2e-45 187.2 209 47.8
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 3.1e-44 183.3 190 46.8
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 7.7e-43 178.7 199 46.7
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 2.9e-42 176.8 190 45.8
Actinidia29137 Actinidia chinensis HOM05D005750 ORTHO05D007126 8.5e-42 175.3 203 45.8
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 1.1e-41 174.9 242 41.3
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 4.2e-41 172.9 236 41.1
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 2.7e-40 170.2 278 37.8
ECA236G1744 Erigeron canadensis HOM05D005750 ORTHO05D007126 1.0e-39 168.3 140 54.3
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 5.3e-36 156.0 201 41.8
Ca_23809_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 1.3e-34 151.4 170 45.9
PGSC0003DMG400019130 Solanum tuberosum HOM05D005750 ORTHO05D007126 3.8e-34 149.8 140 50.7
Nn2g13588 Nelumbo nucifera HOM05D005750 ORTHO05D007126 5.0e-34 149.4 168 45.8
AUR62025787 Chenopodium quinoa HOM05D005750 ORTHO05D007126 1.1e-33 148.3 167 45.5
Solyc10g086770.3 Solanum lycopersicum HOM05D005750 ORTHO05D007126 7.2e-33 145.6 140 50.0
PRCOL_00002333 Prasinoderma coloniale HOM05D005750 ORTHO05D007126 2.6e-27 127.1 267 34.5
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 5.0e-26 122.9 105 54.3
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.2e-19 101.7 76 61.8
TAR636G1840 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.7e-13 81.3 134 33.6
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 2.8e-13 80.5 80 52.5
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 1.4e-12 78.2 48 70.8
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 9.1e-12 75.5 46 69.6
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 3.8e-10 70.1 44 68.2


User provided reference genes

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