Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_4960 Physcomitrium patens HOM05D001942 ORTHO05D028385 2.2e-37 158.3 71 100.0
Pp3c11_18670 Physcomitrium patens HOM05D001942 ORTHO05D001996 9.5e-17 89.7 70 54.3
MCO11G921 Micromonas commoda HOM05D001942 ORTHO05D001996 1.6e-11 72.4 44 61.4
Mapoly0051s0005 Marchantia polymorpha HOM05D001942 ORTHO05D001996 2.1e-11 72.0 68 44.1
AagrBONN_evm.TU.Sc2ySwM_117.835 Anthoceros agrestis HOM05D001942 ORTHO05D001996 6.6e-10 67.0 41 61.0
ECA240G3320 Erigeron canadensis HOM05D001942 ORTHO05D004059 1.5e-09 65.9 54 53.7
HanXRQChr13g0410101 Helianthus annuus HOM05D001942 ORTHO05D001996 3.3e-09 64.7 54 53.7
HanXRQChr03g0080891 Helianthus annuus HOM05D001942 ORTHO05D001996 4.3e-09 64.3 47 55.3
CDE05G2787 Ceratophyllum demersum HOM05D001942 ORTHO05D001996 5.6e-09 63.9 70 38.6
Lsat_1_v5_gn_5_52020 Lactuca sativa HOM05D001942 ORTHO05D001996 9.5e-09 63.2 46 54.3
Nitab4.5_0013689g0010 Nicotiana tabacum HOM05D001942 ORTHO05D001996 1.6e-08 62.4 46 52.2
CAN.G223.18 Capsicum annuum HOM05D001942 ORTHO05D001996 2.8e-08 61.6 46 52.2
Nitab4.5_0000784g0070 Nicotiana tabacum HOM05D001942 ORTHO05D001996 2.8e-08 61.6 46 52.2
Peaxi162Scf00386g00413 Petunia axillaris HOM05D001942 ORTHO05D001996 2.8e-08 61.6 46 52.2
PGR004G2575 Punica granatum HOM05D001942 ORTHO05D001996 2.8e-08 61.6 48 47.9
Cre12.g484350 Chlamydomonas reinhardtii HOM05D001942 ORTHO05D001996 4.7e-08 60.8 43 53.5
Cc03_g02060 Coffea canephora HOM05D001942 ORTHO05D001996 4.7e-08 60.8 46 45.7
Lsat_1_v5_gn_5_105841 Lactuca sativa HOM05D001942 ORTHO05D028385 6.2e-08 60.5 46 50.0
SalBow5G0615 Salvia bowleyana HOM05D001942 ORTHO05D001996 6.2e-08 60.5 46 52.2
Actinidia01462 Actinidia chinensis HOM05D001942 ORTHO05D001996 8.1e-08 60.1 46 52.2
PGSC0003DMG401010657 Solanum tuberosum HOM05D001942 ORTHO05D001996 1.1e-07 59.7 46 52.2
Ciclev10004799m.g Citrus clementina HOM05D001942 ORTHO05D001996 1.4e-07 59.3 46 50.0
DCAR_030540 Daucus carota HOM05D001942 ORTHO05D001996 1.4e-07 59.3 46 52.2
MBI07_g07555_MAGBIO Magnolia biondii HOM05D001942 ORTHO05D001996 1.4e-07 59.3 70 37.1
Oeu029258.2 Olea europaea HOM05D001942 ORTHO05D001996 1.4e-07 59.3 46 50.0
Lalb_Chr20g0114431 Lupinus albus HOM05D001942 ORTHO05D001996 1.8e-07 58.9 72 38.9
Dinv44399 Davidia involucrata HOM05D001942 ORTHO05D001996 2.4e-07 58.5 46 47.8
Eucgr.H03882 Eucalyptus grandis HOM05D001942 ORTHO05D001996 2.4e-07 58.5 43 51.2
Glyma.09G046800 Glycine max HOM05D001942 ORTHO05D001996 2.4e-07 58.5 46 50.0
CSS0043685 Camellia sinensis var. sinensis HOM05D001942 ORTHO05D001996 3.1e-07 58.2 44 47.7
Lj6g0006467 Lotus japonicus HOM05D001942 ORTHO05D001996 3.1e-07 58.2 52 48.1
Oeu021110.1 Olea europaea HOM05D001942 ORTHO05D001996 3.1e-07 58.2 46 45.7
Phvul.009G246000 Phaseolus vulgaris HOM05D001942 ORTHO05D001996 3.1e-07 58.2 67 43.3
TPR.G31152 Trifolium pratense HOM05D001942 ORTHO05D001996 3.1e-07 58.2 52 46.2
VMungo1309G1195 Vigna mungo HOM05D001942 ORTHO05D001996 3.1e-07 58.2 52 44.2
Medtr0392s0010 Medicago truncatula HOM05D001942 ORTHO05D001996 4.0e-07 57.8 46 50.0
PSO017G3656 Papaver somniferum HOM05D001942 ORTHO05D001996 4.0e-07 57.8 44 50.0
PSO478G1222 Papaver somniferum HOM05D001942 ORTHO05D001996 4.0e-07 57.8 44 50.0
Psat1g153160 Pisum sativum HOM05D001942 ORTHO05D001996 4.0e-07 57.8 46 50.0
MSTRG.3932 Avicennia marina HOM05D001942 ORTHO05D001996 5.2e-07 57.4 47 46.8
PRCOL_00002888 Prasinoderma coloniale HOM05D001942 ORTHO05D001996 5.2e-07 57.4 42 50.0
Prupe.1G139100 Prunus persica HOM05D001942 ORTHO05D001996 5.2e-07 57.4 46 50.0
TWI53G0864 Tripterygium wilfordii HOM05D001942 ORTHO05D001996 5.2e-07 57.4 46 50.0
MSTRG.24787 Avicennia marina HOM05D001942 ORTHO05D001996 6.8e-07 57.0 46 50.0
ClCG06G005280 Citrullus lanatus HOM05D001942 ORTHO05D001996 6.8e-07 57.0 46 50.0
MELO3C021347.2 Cucumis melo HOM05D001942 ORTHO05D001996 6.8e-07 57.0 46 50.0
CsaV3_6G017330 Cucumis sativus L. HOM05D001942 ORTHO05D001996 6.8e-07 57.0 46 50.0
Dinv13702 Davidia involucrata HOM05D001942 ORTHO05D001996 6.8e-07 57.0 44 40.9
Sed0013858 Sechium edule HOM05D001942 ORTHO05D001996 6.8e-07 57.0 46 50.0
Dinv38305 Davidia involucrata HOM05D001942 ORTHO05D001996 8.9e-07 56.6 46 52.2
Glyma.15G154300 Glycine max HOM05D001942 ORTHO05D001996 8.9e-07 56.6 46 47.8
Ca_21533_v3 Cicer arietinum L. HOM05D001942 ORTHO05D001996 1.2e-06 56.2 46 47.8
DCAR_024559 Daucus carota HOM05D001942 ORTHO05D001996 1.2e-06 56.2 47 46.8
Migut.G00181 Erythranthe guttata HOM05D001942 ORTHO05D001996 1.2e-06 56.2 40 55.0
Glyma.20G234600 Glycine max HOM05D001942 ORTHO05D001996 1.2e-06 56.2 44 50.0
Lj5g0015789 Lotus japonicus HOM05D001942 ORTHO05D001996 1.2e-06 56.2 44 45.5
Lj5g0026589 Lotus japonicus HOM05D001942 ORTHO05D001996 1.2e-06 56.2 44 45.5
PGR031G1313 Punica granatum HOM05D001942 ORTHO05D001996 1.2e-06 56.2 36 61.1
SEGI_23681 Sequoiadendron giganteum HOM05D001942 ORTHO05D001996 1.2e-06 56.2 44 52.3
TAR633G2083 Trochodendron aralioides HOM05D001942 ORTHO05D001996 1.2e-06 56.2 44 50.0
CSS0029500 Camellia sinensis var. sinensis HOM05D001942 ORTHO05D001996 1.5e-06 55.8 46 47.8
SalBow2G1100 Salvia bowleyana HOM05D001942 ORTHO05D001996 1.5e-06 55.8 40 52.5
SalBow2G1814 Salvia bowleyana HOM05D001942 ORTHO05D001996 1.5e-06 55.8 40 52.5
Solyc01g067590.3 Solanum lycopersicum HOM05D001942 ORTHO05D001996 1.5e-06 55.8 47 51.1
Sopen01g029540 Solanum pennellii HOM05D001942 ORTHO05D001996 1.5e-06 55.8 47 51.1
SGA_v2.0_scaffold428G51520 Striga asiatica HOM05D001942 ORTHO05D001996 1.5e-06 55.8 40 52.5
Atru.chr2.359 Acer truncatum HOM05D001942 ORTHO05D001996 2.0e-06 55.5 60 41.7
CBR_g22060 Chara braunii HOM05D001942 ORTHO05D001996 2.0e-06 55.5 41 51.2
Ca_05810_v3 Cicer arietinum L. HOM05D001942 ORTHO05D001996 2.0e-06 55.5 44 47.7
Lj4g0019649 Lotus japonicus HOM05D001942 ORTHO05D001996 2.0e-06 55.5 46 47.8
Lalb_Chr07g0177641 Lupinus albus HOM05D001942 ORTHO05D001996 2.0e-06 55.5 46 50.0
PSO170G1318 Papaver somniferum HOM05D001942 ORTHO05D001996 2.0e-06 55.5 40 55.0
PSO210G0979 Papaver somniferum HOM05D001942 ORTHO05D001996 2.0e-06 55.5 40 55.0
TPR.G14622 Trifolium pratense HOM05D001942 ORTHO05D001996 2.0e-06 55.5 46 47.8
TAR374G1492 Trochodendron aralioides HOM05D001942 ORTHO05D001996 2.0e-06 55.5 44 43.2
unitig_37.g12391 Utricularia gibba HOM05D001942 ORTHO05D001996 2.0e-06 55.5 52 44.2
Ciclev10000984m.g Citrus clementina HOM05D001942 ORTHO05D001996 2.6e-06 55.1 36 55.6
Duzib177G0180 Durio zibethinus HOM05D001942 ORTHO05D001996 2.6e-06 55.1 44 47.7
Gohir.A08G209700 Gossypium hirsutum HOM05D001942 ORTHO05D001996 2.6e-06 55.1 45 46.7
Gohir.D08G226600 Gossypium hirsutum HOM05D001942 ORTHO05D001996 2.6e-06 55.1 45 46.7
Gorai.004G240500 Gossypium raimondii HOM05D001942 ORTHO05D001996 2.6e-06 55.1 45 46.7
Hma1.2p1_0698F.1_g205330 Hydrangea macrophylla HOM05D001942 ORTHO05D001996 2.6e-06 55.1 54 44.4
Lalb_Chr18g0051801 Lupinus albus HOM05D001942 ORTHO05D001996 2.6e-06 55.1 46 47.8
MD16G1172400 Malus domestica HOM05D001942 ORTHO05D001996 2.6e-06 55.1 45 51.1
Medtr4g119400 Medicago truncatula HOM05D001942 ORTHO05D001996 2.6e-06 55.1 61 42.6
unitig_46.g18687 Utricularia gibba HOM05D001942 ORTHO05D001996 2.6e-06 55.1 40 52.5
GSVIVG01017767001 Vitis vinifera HOM05D001942 ORTHO05D001996 2.6e-06 55.1 46 47.8
Atru.chr4.2802 Acer truncatum HOM05D001942 ORTHO05D001996 3.4e-06 54.7 46 45.7
CANSAT78G2473 Cannabis sativa HOM05D001942 ORTHO05D001996 3.4e-06 54.7 46 47.8
Duzib052G0601 Durio zibethinus HOM05D001942 ORTHO05D001996 3.4e-06 54.7 44 45.5
Migut.N00105 Erythranthe guttata HOM05D001942 ORTHO05D001996 3.4e-06 54.7 40 52.5
MBI19_g24000_MAGBIO Magnolia biondii HOM05D001942 ORTHO05D001996 3.4e-06 54.7 44 50.0
Manes.15G014200 Manihot esculenta HOM05D001942 ORTHO05D001996 3.4e-06 54.7 50 42.0
Nn3g21381 Nelumbo nucifera HOM05D001942 ORTHO05D001996 3.4e-06 54.7 36 52.8
Nn4g25934 Nelumbo nucifera HOM05D001942 ORTHO05D001996 3.4e-06 54.7 44 50.0
Psat4g027960 Pisum sativum HOM05D001942 ORTHO05D001996 3.4e-06 54.7 46 47.8
Aqoxy5G03018 Aquilegia oxysepala HOM05D001942 ORTHO05D001996 4.4e-06 54.3 44 47.7
Aqoxy2G03051 Aquilegia oxysepala HOM05D001942 ORTHO05D001996 5.8e-06 53.9 51 47.1
arahy.Tifrunner.gnm1.ann1.B5S4LJ Arachis hypogaea HOM05D001942 ORTHO05D001996 5.8e-06 53.9 51 43.1
arahy.Tifrunner.gnm1.ann1.KX6P8K Arachis hypogaea HOM05D001942 ORTHO05D001996 5.8e-06 53.9 51 43.1
BcaC07g38469 Brassica carinata HOM05D001942 ORTHO05D001996 5.8e-06 53.9 44 52.3
C08p12410 Brassica napus HOM05D001942 ORTHO05D001996 5.8e-06 53.9 44 52.3
BolC8t48881H Brassica oleracea HOM05D001942 ORTHO05D001996 5.8e-06 53.9 44 52.3
CSS0019245 Camellia sinensis var. sinensis HOM05D001942 ORTHO05D001996 5.8e-06 53.9 44 45.5
CDE01G0552 Ceratophyllum demersum HOM05D001942 ORTHO05D001996 5.8e-06 53.9 43 44.2
TAR362G0013 Trochodendron aralioides HOM05D001942 ORTHO05D001996 5.8e-06 53.9 57 42.1
TAR622G0599 Trochodendron aralioides HOM05D001942 ORTHO05D001996 5.8e-06 53.9 44 43.2
A08p34850 Brassica napus HOM05D001942 ORTHO05D001996 7.6e-06 53.5 44 52.3
BraA08t35396Z Brassica rapa HOM05D001942 ORTHO05D001996 7.6e-06 53.5 44 52.3
Gohir.A11G295200 Gossypium hirsutum HOM05D001942 ORTHO05D001996 7.6e-06 53.5 44 45.5
Manes.03G192700 Manihot esculenta HOM05D001942 ORTHO05D001996 7.6e-06 53.5 47 44.7
Oeu026306.3 Olea europaea HOM05D001942 ORTHO05D001996 7.6e-06 53.5 46 47.8
Phvul.003G103000 Phaseolus vulgaris HOM05D001942 ORTHO05D001996 7.6e-06 53.5 46 47.8
BcaB07g34119 Brassica carinata HOM05D001942 ORTHO05D001996 9.9e-06 53.1 65 41.5
BcaC05g24753 Brassica carinata HOM05D001942 ORTHO05D001996 9.9e-06 53.1 65 41.5
A06p05840 Brassica napus HOM05D001942 ORTHO05D001996 9.9e-06 53.1 65 41.5
C05p07050 Brassica napus HOM05D001942 ORTHO05D001996 9.9e-06 53.1 65 41.5
BolC5t29460H Brassica oleracea HOM05D001942 ORTHO05D001996 9.9e-06 53.1 65 41.5
BraA06t23794Z Brassica rapa HOM05D001942 ORTHO05D001996 9.9e-06 53.1 65 41.5
Lalb_Chr15g0077251 Lupinus albus HOM05D001942 ORTHO05D001996 9.9e-06 53.1 44 40.9
Psat0s2406g0160 Pisum sativum HOM05D001942 ORTHO05D001996 9.9e-06 53.1 44 45.5
Sed0025025 Sechium edule HOM05D001942 ORTHO05D001996 9.9e-06 53.1 46 45.7


User provided reference genes

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