Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 1.2e-112 411.4 203 100.0
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 9.1e-65 252.3 203 61.6
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 6.3e-26 123.2 128 46.1
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 1.8e-25 121.7 128 48.4
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 6.1e-21 106.7 126 37.3
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 1.4e-20 105.5 162 37.7
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 2.3e-20 104.8 139 36.7
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 2.3e-20 104.8 162 37.0
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 6.8e-20 103.2 140 41.4
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 6.8e-20 103.2 125 40.0
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 1.2e-19 102.4 141 37.6
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 2.0e-19 101.7 139 36.0
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 2.6e-19 101.3 125 41.6
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 4.4e-19 100.5 140 40.0
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 4.4e-19 100.5 125 40.0
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 4.4e-19 100.5 140 39.3
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 4.4e-19 100.5 151 36.4
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 5.7e-19 100.1 160 37.5
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 5.7e-19 100.1 169 33.7
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 5.7e-19 100.1 139 36.7
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 9.8e-19 99.4 125 39.2
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 9.8e-19 99.4 125 40.0
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 9.8e-19 99.4 141 34.8
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 1.3e-18 99.0 125 40.0
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 1.3e-18 99.0 125 37.6
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 1.3e-18 99.0 125 36.8
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 1.7e-18 98.6 125 37.6
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 1.7e-18 98.6 125 37.6
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 2.2e-18 98.2 125 40.0
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 2.2e-18 98.2 139 36.0
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 2.2e-18 98.2 139 36.7
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 3.7e-18 97.4 140 35.7
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 3.7e-18 97.4 139 36.0
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 3.7e-18 97.4 126 35.7
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 4.9e-18 97.1 125 36.8
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 4.9e-18 97.1 139 36.7
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 6.4e-18 96.7 189 32.3
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 6.4e-18 96.7 140 36.4
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 6.4e-18 96.7 159 35.2
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 8.3e-18 96.3 126 37.3
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 8.3e-18 96.3 140 34.3
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 8.3e-18 96.3 140 34.3
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 1.1e-17 95.9 140 34.3
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 1.1e-17 95.9 125 36.8
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 1.1e-17 95.9 143 35.7
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 1.1e-17 95.9 159 34.6
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 1.8e-17 95.1 125 36.8
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 2.4e-17 94.7 125 36.0
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 2.4e-17 94.7 139 36.0
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 2.4e-17 94.7 139 35.3
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 3.2e-17 94.4 139 35.3
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 3.2e-17 94.4 159 34.6
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 3.2e-17 94.4 125 36.8
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 3.2e-17 94.4 139 36.0
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 3.2e-17 94.4 139 36.0
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 3.2e-17 94.4 139 36.7
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 4.1e-17 94.0 125 33.6
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 4.1e-17 94.0 125 38.4
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 4.1e-17 94.0 138 36.2
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 4.1e-17 94.0 163 33.1
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 4.1e-17 94.0 162 34.6
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 5.4e-17 93.6 139 33.8
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 5.4e-17 93.6 140 35.7
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 7.0e-17 93.2 140 34.3
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 9.2e-17 92.8 169 29.6
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 9.2e-17 92.8 151 33.1
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 9.2e-17 92.8 139 35.3
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 9.2e-17 92.8 139 36.0
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 1.2e-16 92.4 139 36.0
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 2.0e-16 91.7 108 34.3
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 2.0e-16 91.7 140 37.1
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 2.7e-16 91.3 139 35.3
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 2.7e-16 91.3 125 36.0
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 3.5e-16 90.9 140 34.3
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 4.6e-16 90.5 139 35.3
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 4.6e-16 90.5 139 35.3
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 4.6e-16 90.5 176 29.5
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 5.9e-16 90.1 108 36.1
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 7.8e-16 89.7 142 35.9
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 7.8e-16 89.7 139 35.3
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 1.0e-15 89.4 125 33.6
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 1.0e-15 89.4 140 32.1
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 1.3e-15 89.0 180 30.0
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 1.7e-15 88.6 139 34.5
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 1.7e-15 88.6 139 34.5
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 8.6e-15 86.3 86 40.7
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 9.5e-14 82.8 203 30.0
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 6.2e-13 80.1 147 30.6
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 3.1e-12 77.8 167 28.1
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 4.0e-12 77.4 145 29.7
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 2.9e-10 71.2 163 28.8
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 2.7e-08 64.7 72 37.5
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 3.0e-07 61.2 57 47.4


User provided reference genes

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