Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 3.9e-276 954.1 466 100.0
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 2.7e-152 542.7 471 58.8
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 3.9e-127 459.1 480 51.2
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 1.0e-111 407.9 461 51.0
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 2.5e-97 360.1 467 43.9
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 7.2e-97 358.6 461 45.6
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 4.7e-96 355.9 470 43.8
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 6.1e-96 355.5 461 44.7
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 6.1e-96 355.5 470 43.6
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 8.0e-96 355.1 461 44.7
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.0e-95 354.8 461 44.3
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 4.0e-95 352.8 465 43.4
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 4.0e-95 352.8 469 43.5
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 4.0e-95 352.8 470 44.0
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 2.6e-94 350.1 467 44.3
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 3.7e-93 346.3 470 43.2
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 1.1e-92 344.7 468 45.5
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 1.4e-92 344.4 469 43.7
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 1.8e-92 344.0 469 43.7
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 2.4e-92 343.6 464 43.8
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 4.1e-92 342.8 469 43.5
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 9.1e-92 341.7 467 44.3
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 2.0e-91 340.5 471 42.5
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 4.5e-91 339.3 464 43.3
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 5.9e-91 339.0 468 44.7
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 5.9e-91 339.0 464 44.2
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 7.7e-91 338.6 514 41.1
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 1.0e-90 338.2 470 44.0
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 1.7e-90 337.4 462 43.5
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 2.2e-90 337.0 466 42.7
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.9e-90 336.7 466 42.5
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 2.9e-90 336.7 464 44.0
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 2.9e-90 336.7 464 44.0
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 8.5e-90 335.1 466 42.3
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 1.1e-89 334.7 463 43.0
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 1.9e-89 334.0 465 41.9
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 3.2e-89 333.2 465 42.4
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 5.5e-89 332.4 464 42.5
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 9.4e-89 331.6 463 42.8
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 2.7e-88 330.1 465 42.8
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 2.7e-88 330.1 467 41.8
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 4.7e-88 329.3 463 42.3
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 4.7e-88 329.3 466 43.1
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 8.0e-88 328.6 466 41.8
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 1.0e-87 328.2 469 42.0
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 2.3e-87 327.0 469 41.8
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 5.2e-87 325.9 463 41.7
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 8.8e-87 325.1 460 42.0
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 2.0e-86 323.9 460 41.1
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 2.6e-86 323.6 461 41.2
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 2.6e-86 323.6 469 40.7
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.3e-85 321.2 486 40.9
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 1.7e-85 320.9 462 41.3
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 2.2e-85 320.5 466 41.6
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 2.2e-85 320.5 463 40.8
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 4.9e-85 319.3 465 42.2
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 4.9e-85 319.3 464 42.7
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 1.1e-84 318.2 463 41.9
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 1.1e-84 318.2 463 43.0
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 1.4e-84 317.8 464 40.9
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 1.4e-84 317.8 464 41.2
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 1.4e-84 317.8 467 39.8
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 1.8e-84 317.4 466 41.8
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 1.8e-84 317.4 463 43.4
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 2.4e-84 317.0 463 42.1
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 3.1e-84 316.6 463 42.3
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 3.1e-84 316.6 461 40.6
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 3.1e-84 316.6 465 39.6
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 4.1e-84 316.2 461 40.6
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 4.1e-84 316.2 463 42.3
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 5.4e-84 315.8 467 41.3
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 7.0e-84 315.5 462 40.5
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 9.2e-84 315.1 438 42.9
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 9.2e-84 315.1 477 41.5
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 1.2e-83 314.7 461 40.8
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 2.0e-83 313.9 465 40.4
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 4.5e-83 312.8 470 42.1
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 5.9e-83 312.4 468 41.9
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 7.7e-83 312.0 468 40.6
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 7.7e-83 312.0 468 40.6
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 1.0e-82 311.6 464 40.7
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 1.3e-82 311.2 463 42.8
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 2.3e-82 310.5 463 41.7
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 5.0e-82 309.3 463 42.8
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 1.1e-81 308.1 465 38.7
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 1.1e-81 308.1 463 41.7
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 1.5e-81 307.8 463 42.3
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 1.5e-81 307.8 463 42.3
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 1.5e-81 307.8 463 42.3
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 2.5e-81 307.0 468 42.1
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 1.2e-80 304.7 463 41.3
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 1.6e-80 304.3 456 40.4
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 1.0e-79 301.6 468 40.0
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 4.0e-79 299.7 465 40.2
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 3.4e-78 296.6 466 39.1
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 1.5e-73 281.2 461 37.7
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 4.3e-73 279.6 454 39.2
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 7.5e-70 268.9 412 42.5
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 2.7e-67 260.4 470 36.2
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 4.3e-65 253.1 464 35.3
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 1.0e-58 231.9 470 34.3
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 8.1e-56 222.2 294 45.2
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 2.3e-55 220.7 294 45.2
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 2.4e-52 210.7 408 34.1
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 1.6e-51 208.0 162 63.0
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 7.8e-51 205.7 161 61.5
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 2.5e-49 200.7 161 60.9
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 1.6e-48 198.0 163 58.9
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 2.7e-43 180.6 497 30.0
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 5.8e-38 162.9 497 27.6
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 2.4e-36 157.5 515 25.6
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 8.1e-32 142.5 125 53.6
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 9.3e-28 129.0 120 51.7
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 6.0e-27 126.3 114 56.1
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 1.6e-24 118.2 122 49.2
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 5.7e-17 93.2 107 43.9
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 3.8e-13 80.5 159 34.6
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 3.2e-12 77.4 92 50.0
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 2.2e-08 64.7 70 54.3
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 8.2e-08 62.8 104 35.6


User provided reference genes

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