Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_16520 Physcomitrium patens HOM05D005249 ORTHO05D006457 2.3e-91 339.0 185 100.0
A05p28310 Brassica napus HOM05D005249 ORTHO05D006457 4.2e-40 168.7 163 57.7
BraA05t21713Z Brassica rapa HOM05D005249 ORTHO05D006457 4.2e-40 168.7 163 57.7
BolC5t33095H Brassica oleracea HOM05D005249 ORTHO05D006457 9.4e-40 167.5 163 57.1
Thhalv10021639m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 6.1e-39 164.9 162 59.3
C05p43800 Brassica napus HOM05D005249 ORTHO05D006457 1.8e-38 163.3 164 57.3
AT1G50900 Arabidopsis thaliana HOM05D005249 ORTHO05D006457 3.0e-38 162.5 120 66.7
RcHm_v2.0_Chr5g0038151 Rosa chinensis HOM05D005249 ORTHO05D006457 8.8e-38 161.0 120 65.8
AL1G58630 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 1.1e-37 160.6 120 65.8
Carub.0001s3985 Capsella rubella HOM05D005249 ORTHO05D006457 1.1e-37 160.6 150 58.7
Carub.0003s2051 Capsella rubella HOM05D005249 ORTHO05D006457 1.1e-37 160.6 189 51.9
TWI38G0945 Tripterygium wilfordii HOM05D005249 ORTHO05D006457 1.1e-37 160.6 131 61.8
Dinv22281 Davidia involucrata HOM05D005249 ORTHO05D006457 1.5e-37 160.2 155 58.1
FvH4_3g22190 Fragaria vesca HOM05D005249 ORTHO05D006457 1.5e-37 160.2 120 65.0
A05p19870 Brassica napus HOM05D005249 ORTHO05D006457 2.0e-37 159.8 120 65.8
BraA05t20892Z Brassica rapa HOM05D005249 ORTHO05D006457 2.0e-37 159.8 120 65.8
Ciclev10009689m.g Citrus clementina HOM05D005249 ORTHO05D006457 2.6e-37 159.5 148 57.4
Thhalv10011819m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 2.6e-37 159.5 120 65.8
MD03G1207700 Malus domestica HOM05D005249 ORTHO05D006457 2.6e-37 159.5 120 65.0
QL08p011891 Quercus lobata HOM05D005249 ORTHO05D006457 3.3e-37 159.1 120 65.0
QL08p012062 Quercus lobata HOM05D005249 ORTHO05D006457 3.3e-37 159.1 120 65.0
Sp3g18550 Schrenkiella parvula HOM05D005249 ORTHO05D006457 4.4e-37 158.7 185 53.5
GSVIVG01002001001 Vitis vinifera HOM05D005249 ORTHO05D006457 5.7e-37 158.3 127 63.0
Hma1.2p1_1271F.1_g271820 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 7.4e-37 157.9 156 56.4
Hma1.2p1_1609F.1_g293423 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 7.4e-37 157.9 156 56.4
Lj8A167T50 Lonicera japonica HOM05D005249 ORTHO05D006457 7.4e-37 157.9 156 57.1
A06p02830 Brassica napus HOM05D005249 ORTHO05D006457 9.7e-37 157.5 147 57.8
BraA06t23490Z Brassica rapa HOM05D005249 ORTHO05D006457 9.7e-37 157.5 147 57.8
BcaB07g33531 Brassica carinata HOM05D005249 ORTHO05D006457 1.3e-36 157.1 155 58.7
Cpa.g.sc97.36 Carica papaya HOM05D005249 ORTHO05D006457 1.3e-36 157.1 147 57.8
Ca_08298_v3 Cicer arietinum L. HOM05D005249 ORTHO05D006457 1.3e-36 157.1 152 58.6
Migut.M01785 Erythranthe guttata HOM05D005249 ORTHO05D006457 1.3e-36 157.1 123 64.2
HanXRQChr05g0159111 Helianthus annuus HOM05D005249 ORTHO05D006457 1.3e-36 157.1 157 56.7
SMO137G0373 Selaginella moellendorffii HOM05D005249 ORTHO05D006457 1.7e-36 156.8 120 65.0
Thecc.07G044000 Theobroma cacao HOM05D005249 ORTHO05D006457 1.7e-36 156.8 120 62.5
Manes.15G073900 Manihot esculenta HOM05D005249 ORTHO05D006457 2.2e-36 156.4 120 65.8
CiPaw.11G187100 Carya illinoinensis HOM05D005249 ORTHO05D006457 2.8e-36 156.0 120 62.5
Haze_09646 Corylus avellana HOM05D005249 ORTHO05D006457 2.8e-36 156.0 120 62.5
Gohir.A01G077300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 2.8e-36 156.0 154 58.4
Lj6g0004310 Lotus japonicus HOM05D005249 ORTHO05D006457 2.8e-36 156.0 144 59.0
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 2.8e-36 156.0 120 64.2
Cfa020386 Carpinus fangiana HOM05D005249 ORTHO05D006457 3.7e-36 155.6 120 62.5
Aa31LG10G3330 Aethionema arabicum HOM05D005249 ORTHO05D006457 4.8e-36 155.2 163 53.4
arahy.Tifrunner.gnm1.ann1.I048YJ Arachis hypogaea HOM05D005249 ORTHO05D006457 4.8e-36 155.2 125 61.6
Gohir.A04G019300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 4.8e-36 155.2 142 58.5
Gohir.D05G366500 Gossypium hirsutum HOM05D005249 ORTHO05D006457 6.3e-36 154.8 168 53.0
Manes.03G127000 Manihot esculenta HOM05D005249 ORTHO05D006457 6.3e-36 154.8 120 65.8
Sabra16G0285800 Salix brachista HOM05D005249 ORTHO05D006457 6.3e-36 154.8 124 60.5
MSTRG.15162 Avicennia marina HOM05D005249 ORTHO05D006457 8.2e-36 154.5 169 53.3
Eucgr.F03446 Eucalyptus grandis HOM05D005249 ORTHO05D006457 1.4e-35 153.7 125 61.6
Sp1g37640 Schrenkiella parvula HOM05D005249 ORTHO05D006457 1.4e-35 153.7 163 56.4
THA.LOC104798778 Tarenaya hassleriana HOM05D005249 ORTHO05D006457 1.4e-35 153.7 172 52.9
C05p33210 Brassica napus HOM05D005249 ORTHO05D006457 1.8e-35 153.3 149 56.4
COL.COLO4_09631 Corchorus olitorius HOM05D005249 ORTHO05D006457 1.8e-35 153.3 159 54.7
VMungo0540G0590 Vigna mungo HOM05D005249 ORTHO05D006457 1.8e-35 153.3 158 54.4
Potri.001G420900 Populus trichocarpa HOM05D005249 ORTHO05D006457 2.4e-35 152.9 125 60.8
Aqoxy1G03622 Aquilegia oxysepala HOM05D005249 ORTHO05D006457 3.1e-35 152.5 141 57.4
SGA_v2.0_scaffold258G45797 Striga asiatica HOM05D005249 ORTHO05D006457 3.1e-35 152.5 162 54.3
Glyma.08G312800 Glycine max HOM05D005249 ORTHO05D006457 4.1e-35 152.1 150 55.3
Atru.chr2.3277 Acer truncatum HOM05D005249 ORTHO05D006457 6.9e-35 151.4 109 67.9
ATR0752G229 Amborella trichopoda HOM05D005249 ORTHO05D006457 6.9e-35 151.4 116 63.8
arahy.Tifrunner.gnm1.ann1.EK5LIC Arachis hypogaea HOM05D005249 ORTHO05D006457 6.9e-35 151.4 166 52.4
Glyma.18G102100 Glycine max HOM05D005249 ORTHO05D006457 6.9e-35 151.4 149 55.7
PSO832G4498 Papaver somniferum HOM05D005249 ORTHO05D006457 6.9e-35 151.4 162 53.7
Lalb_Chr15g0080371 Lupinus albus HOM05D005249 ORTHO05D006457 9.1e-35 151.0 163 54.6
Lsat_1_v5_gn_5_5181 Lactuca sativa HOM05D005249 ORTHO05D006457 1.2e-34 150.6 157 55.4
Prupe.4G209000 Prunus persica HOM05D005249 ORTHO05D006457 1.2e-34 150.6 171 51.5
AL8G37450 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 1.5e-34 150.2 174 52.9
CANSAT21G2135 Cannabis sativa HOM05D005249 ORTHO05D006457 2.0e-34 149.8 151 55.0
BcaC08g43263 Brassica carinata HOM05D005249 ORTHO05D006457 2.6e-34 149.4 174 52.9
C06p06070 Brassica napus HOM05D005249 ORTHO05D006457 2.6e-34 149.4 174 52.9
BolC6t35720H Brassica oleracea HOM05D005249 ORTHO05D006457 2.6e-34 149.4 174 52.9
Medtr3g019320 Medicago truncatula HOM05D005249 ORTHO05D006457 3.4e-34 149.1 155 56.8
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 4.5e-34 148.7 125 60.0
Oeu062605.1 Olea europaea HOM05D005249 ORTHO05D006457 5.9e-34 148.3 180 50.6
PSO210G5271 Papaver somniferum HOM05D005249 ORTHO05D006457 5.9e-34 148.3 171 52.0
Phvul.006G038600 Phaseolus vulgaris HOM05D005249 ORTHO05D006457 5.9e-34 148.3 126 57.9
unitig_578.g16003 Utricularia gibba HOM05D005249 ORTHO05D006457 5.9e-34 148.3 171 49.7
Gohir.D01G064800 Gossypium hirsutum HOM05D005249 ORTHO05D006457 7.7e-34 147.9 168 53.0
Gorai.002G085700 Gossypium raimondii HOM05D005249 ORTHO05D006457 7.7e-34 147.9 168 53.0
Cc05_g13500 Coffea canephora HOM05D005249 ORTHO05D006457 1.3e-33 147.1 153 53.6
TAR626G0063 Trochodendron aralioides HOM05D005249 ORTHO05D006457 1.3e-33 147.1 171 49.7
CDE05G2685 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 6.5e-33 144.8 120 60.8
Duzib213G0461 Durio zibethinus HOM05D005249 ORTHO05D006457 6.5e-33 144.8 166 52.4
Psat5g216840 Pisum sativum HOM05D005249 ORTHO05D006457 6.5e-33 144.8 153 54.9
Actinidia05108 Actinidia chinensis HOM05D005249 ORTHO05D006457 8.5e-33 144.4 153 54.9
ECA246G1486 Erigeron canadensis HOM05D005249 ORTHO05D006457 8.5e-33 144.4 171 50.3
Peaxi162Scf00387g00046 Petunia axillaris HOM05D005249 ORTHO05D006457 8.5e-33 144.4 148 54.7
CSS0021065 Camellia sinensis var. sinensis HOM05D005249 ORTHO05D006457 1.1e-32 144.1 157 52.9
CBR_g12744 Chara braunii HOM05D005249 ORTHO05D006457 1.1e-32 144.1 144 54.9
PGR031G1044 Punica granatum HOM05D005249 ORTHO05D006457 1.1e-32 144.1 169 50.9
Sopen10g002320 Solanum pennellii HOM05D005249 ORTHO05D006457 1.1e-32 144.1 120 60.0
AUR62020502 Chenopodium quinoa HOM05D005249 ORTHO05D006457 1.4e-32 143.7 173 53.2
TAR624G0120 Trochodendron aralioides HOM05D005249 ORTHO05D006457 1.4e-32 143.7 168 50.6
MELO3C025397.2 Cucumis melo HOM05D005249 ORTHO05D006457 2.5e-32 142.9 123 60.2
ClCG10G005560 Citrullus lanatus HOM05D005249 ORTHO05D006457 4.2e-32 142.1 121 59.5
CsaV3_3G005280 Cucumis sativus L. HOM05D005249 ORTHO05D006457 7.2e-32 141.4 121 60.3
Nn1g07102 Nelumbo nucifera HOM05D005249 ORTHO05D006457 9.4e-32 141.0 176 47.7
BcaB07g33530 Brassica carinata HOM05D005249 ORTHO05D006457 1.2e-31 140.6 136 60.3
Dinv40734 Davidia involucrata HOM05D005249 ORTHO05D006457 1.2e-31 140.6 130 60.8
AUR62015702 Chenopodium quinoa HOM05D005249 ORTHO05D006457 2.1e-31 139.8 168 51.2
MBI02_g28338_MAGBIO Magnolia biondii HOM05D005249 ORTHO05D006457 2.1e-31 139.8 170 50.0
Rhsim04G0001800 Rhododendron simsii HOM05D005249 ORTHO05D006457 2.1e-31 139.8 171 53.2
Ah.06g182920 Amaranthus hybridus HOM05D005249 ORTHO05D006457 2.7e-31 139.4 178 51.1
PGSC0003DMG400014394 Solanum tuberosum HOM05D005249 ORTHO05D006457 3.6e-31 139.0 166 49.4
CAN.G1781.9 Capsicum annuum HOM05D005249 ORTHO05D006457 6.1e-31 138.3 146 52.1
Actinidia09913 Actinidia chinensis HOM05D005249 ORTHO05D006457 7.9e-31 137.9 160 51.9
Solyc10g006370.3 Solanum lycopersicum HOM05D005249 ORTHO05D006457 1.0e-30 137.5 166 48.8
BcaB02g11192 Brassica carinata HOM05D005249 ORTHO05D006457 1.4e-30 137.1 159 51.6
Nitab4.5_0005048g0030 Nicotiana tabacum HOM05D005249 ORTHO05D006457 1.8e-30 136.7 171 48.5
Mapoly0006s0110 Marchantia polymorpha HOM05D005249 ORTHO05D006457 3.9e-30 135.6 177 50.8
Sc16g0006280 Simmondsia chinensis HOM05D005249 ORTHO05D006457 1.5e-29 133.7 181 48.1
Sed0007548 Sechium edule HOM05D005249 ORTHO05D006457 4.4e-29 132.1 165 51.5
Gorai.009G425200 Gossypium raimondii HOM05D005249 ORTHO05D006457 5.7e-29 131.7 211 41.7
CDE11G0574 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 9.7e-29 131.0 156 49.4
EL10Ac4g07899 Beta vulgaris HOM05D005249 ORTHO05D006457 1.8e-27 126.7 167 49.1
CDE05G0273 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 2.4e-27 126.3 149 49.0
HPP92_017607 Vanilla planifolia HOM05D005249 ORTHO05D006457 4.1e-27 125.6 174 45.4
SEGI_08050 Sequoiadendron giganteum HOM05D005249 ORTHO05D006457 1.2e-26 124.0 179 44.7
Os07g0520800 Oryza sativa ssp. japonica HOM05D005249 ORTHO05D006457 1.6e-26 123.6 163 50.9
Zm00001eb322850 Zea mays HOM05D005249 ORTHO05D006457 2.0e-26 123.2 179 47.5
Cre12.g551950 Chlamydomonas reinhardtii HOM05D005249 ORTHO05D006457 8.5e-25 117.9 171 42.1
PRCOL_00000858 Prasinoderma coloniale HOM05D005249 ORTHO05D006457 1.9e-24 116.7 100 56.0
FAN11G3900 Fragaria x ananassa HOM05D005249 ORTHO05D006340 7.2e-24 114.8 230 34.3
CARHR096310 Cardamine hirsuta HOM05D005249 ORTHO05D006457 4.7e-23 112.1 87 66.7
FAN16G3206 Fragaria x ananassa HOM05D005249 ORTHO05D006340 4.0e-22 109.0 230 32.6
CARHR040950 Cardamine hirsuta HOM05D005249 ORTHO05D006457 4.4e-21 105.5 78 67.9
Nitab4.5_0001393g0170 Nicotiana tabacum HOM05D005249 ORTHO05D006457 4.4e-21 105.5 171 42.1
MCO16G329 Micromonas commoda HOM05D005249 ORTHO05D006457 5.7e-21 105.1 144 43.8
vmacro09735 Vaccinium macrocarpon HOM05D005249 ORTHO05D006457 6.3e-20 101.7 201 39.3
BcaB06g26188 Brassica carinata HOM05D005249 ORTHO05D006457 1.8e-19 100.1 78 66.7
Rhsim04G0000700 Rhododendron simsii HOM05D005249 ORTHO05D006457 2.4e-19 99.8 78 64.1
FAN21G3293 Fragaria x ananassa HOM05D005249 ORTHO05D006457 1.1e-16 90.9 73 61.6
Cfa020388 Carpinus fangiana HOM05D005249 ORTHO05D006457 5.5e-16 88.6 73 58.9
TPR.G3850 Trifolium pratense HOM05D005249 ORTHO05D006457 6.1e-15 85.1 68 64.7
Glyma.09G102000 Glycine max HOM05D005249 ORTHO05D006457 3.0e-14 82.8 53 73.6
Pp3c6_9300 Physcomitrium patens HOM05D005249 ORTHO05D006457 8.6e-09 64.7 69 49.3
BcaC05g27384 Brassica carinata HOM05D005249 ORTHO05D006457 7.2e-08 61.6 72 47.2
CARHR040940 Cardamine hirsuta HOM05D005249 ORTHO05D006457 4.7e-07 58.9 69 52.2
CARHR096330 Cardamine hirsuta HOM05D005249 ORTHO05D006457 4.7e-07 58.9 75 49.3
CBR_g602 Chara braunii HOM05D005249 ORTHO05D006457 1.8e-06 57.0 62 45.2
Atru.chr2.3276 Acer truncatum HOM05D005249 ORTHO05D006457 3.0e-06 56.2 45 57.8


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