Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 1.3e-91 339.7 177 100.0
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 2.9e-54 215.7 178 65.2
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 4.3e-50 201.8 175 62.3
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 4.3e-50 201.8 175 62.3
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 4.3e-50 201.8 175 62.3
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.1e-49 199.5 168 64.9
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.1e-49 199.5 168 64.9
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 6.2e-49 198.0 168 64.3
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 6.2e-49 198.0 168 64.9
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 8.1e-49 197.6 175 61.1
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 8.1e-49 197.6 168 64.3
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 1.1e-48 197.2 172 62.8
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 1.1e-48 197.2 175 60.6
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 1.4e-48 196.8 175 60.6
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 4.0e-48 195.3 167 63.5
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 5.2e-48 194.9 167 62.9
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 8.9e-48 194.1 176 60.8
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 8.9e-48 194.1 170 62.9
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 8.9e-48 194.1 167 61.7
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 8.9e-48 194.1 167 63.5
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 1.2e-47 193.7 177 60.5
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 1.2e-47 193.7 167 62.3
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 2.6e-47 192.6 175 59.4
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 2.6e-47 192.6 175 60.0
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 3.4e-47 192.2 175 59.4
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 3.4e-47 192.2 175 60.0
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 4.4e-47 191.8 169 62.7
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 4.4e-47 191.8 176 60.8
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 7.6e-47 191.0 178 61.8
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 7.6e-47 191.0 170 62.4
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 7.6e-47 191.0 173 60.1
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 9.9e-47 190.7 174 60.9
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 9.9e-47 190.7 174 61.5
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 9.9e-47 190.7 174 61.5
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 9.9e-47 190.7 174 61.5
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 9.9e-47 190.7 169 62.1
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 1.7e-46 189.9 175 60.6
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 1.7e-46 189.9 174 60.9
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 1.7e-46 189.9 168 61.9
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 2.2e-46 189.5 169 62.7
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 2.2e-46 189.5 174 60.9
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 2.2e-46 189.5 167 60.5
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 3.8e-46 188.7 168 61.9
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 4.9e-46 188.3 170 61.8
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 4.9e-46 188.3 168 60.7
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 4.9e-46 188.3 175 57.7
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 6.4e-46 188.0 176 60.2
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 6.4e-46 188.0 174 60.3
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 6.4e-46 188.0 176 58.0
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 6.4e-46 188.0 167 59.9
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 1.1e-45 187.2 170 62.4
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 1.4e-45 186.8 175 57.7
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 1.4e-45 186.8 168 60.1
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 1.4e-45 186.8 175 58.9
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 1.9e-45 186.4 174 59.8
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 1.9e-45 186.4 174 59.8
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.9e-45 186.4 168 61.3
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 1.9e-45 186.4 167 61.1
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 2.4e-45 186.0 176 58.5
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 2.4e-45 186.0 177 59.9
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 2.4e-45 186.0 167 61.1
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 3.2e-45 185.7 179 59.2
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 3.2e-45 185.7 171 60.8
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 4.2e-45 185.3 179 58.7
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 4.2e-45 185.3 175 57.1
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 5.4e-45 184.9 171 58.5
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 5.4e-45 184.9 180 58.9
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 7.1e-45 184.5 174 60.3
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 9.3e-45 184.1 171 60.2
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 1.2e-44 183.7 169 61.5
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 1.2e-44 183.7 188 58.0
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 1.6e-44 183.3 177 57.1
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 1.6e-44 183.3 149 64.4
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 2.7e-44 182.6 177 58.2
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 3.5e-44 182.2 179 59.2
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 3.5e-44 182.2 177 59.9
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 7.8e-44 181.0 177 59.9
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 1.0e-43 180.6 179 59.8
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 1.0e-43 180.6 175 56.6
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 1.3e-43 180.3 179 57.0
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 1.7e-43 179.9 178 58.4
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 3.9e-43 178.7 178 56.7
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 8.7e-43 177.6 179 58.1
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 5.6e-42 174.9 178 55.6
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 2.8e-41 172.6 179 57.0
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 2.8e-41 172.6 176 55.7
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 2.4e-40 169.5 180 57.2
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 5.3e-40 168.3 156 60.9
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 1.5e-39 166.8 172 57.0
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 2.0e-39 166.4 171 56.1
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 2.6e-39 166.0 141 61.0
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 2.2e-38 162.9 176 54.0
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 4.3e-34 148.7 170 50.0
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 4.3e-34 148.7 155 57.4
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 5.6e-34 148.3 155 58.7
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 2.8e-33 146.0 149 53.0
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 9.3e-29 131.0 169 46.2
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 1.0e-27 127.5 142 56.3
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 1.8e-27 126.7 144 54.2
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 3.9e-27 125.6 147 52.4
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 5.1e-27 125.2 120 60.8
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 6.7e-27 124.8 167 49.7
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 5.6e-26 121.7 154 50.0
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 2.1e-25 119.8 134 54.5
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 2.1e-25 119.8 146 53.4
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 8.1e-25 117.9 134 53.7
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 2.5e-18 96.3 168 41.1
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 3.3e-18 95.9 116 51.7
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 1.6e-17 93.6 101 57.4
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 1.4e-16 90.5 116 50.9
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 1.4e-13 80.5 108 50.0
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 1.2e-12 77.4 110 47.3
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 1.0e-11 74.3 74 54.1
CBR_g4734 Chara braunii HOM05D005631 ORTHO05D006765 1.3e-09 67.4 121 44.6
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 2.4e-08 63.2 101 46.5
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 6.9e-08 61.6 120 44.2
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 1.2e-07 60.8 61 55.7
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 2.0e-07 60.1 136 34.6
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 3.4e-07 59.3 61 54.1
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 3.4e-07 59.3 61 54.1
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 4.5e-07 58.9 60 56.7
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 1.0e-06 57.8 61 54.1
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 2.2e-06 56.6 62 53.2
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 2.9e-06 56.2 62 54.8
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 5.0e-06 55.5 61 52.5


User provided reference genes

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