Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_29270 Physcomitrium patens HOM05D003950 ORTHO05D004697 2.9e-151 538.9 352 100.0
Pp3c22_8500 Physcomitrium patens HOM05D003950 ORTHO05D004697 2.9e-29 133.7 188 46.3
Pp3c22_3970 Physcomitrium patens HOM05D003950 ORTHO05D004697 1.6e-24 117.9 167 47.9
Pp3c22_8540 Physcomitrium patens HOM05D003950 ORTHO05D004697 6.2e-24 115.9 334 47.9
RcHm_v2.0_Chr3g0496431 Rosa chinensis HOM05D003950 ORTHO05D004697 7.5e-22 109.0 206 43.2
CANSAT78G2427 Cannabis sativa HOM05D003950 ORTHO05D004697 2.9e-21 107.1 210 41.9
PSO339G3097 Papaver somniferum HOM05D003950 ORTHO05D004697 4.9e-21 106.3 210 41.9
MD12G1008500 Malus domestica HOM05D003950 ORTHO05D004697 6.4e-21 105.9 207 44.0
FvH4_1g28440 Fragaria vesca HOM05D003950 ORTHO05D004697 8.3e-21 105.5 205 42.4
MD03G1047000 Malus domestica HOM05D003950 ORTHO05D004697 8.3e-21 105.5 172 45.9
Prupe.6G036000 Prunus persica HOM05D003950 ORTHO05D004697 1.9e-20 104.4 170 44.7
CANSAT78G2379 Cannabis sativa HOM05D003950 ORTHO05D004697 2.4e-20 104.0 151 48.3
COL.COLO4_28614 Corchorus olitorius HOM05D003950 ORTHO05D004697 2.4e-20 104.0 205 42.9
Gohir.A13G164200 Gossypium hirsutum HOM05D003950 ORTHO05D004697 2.4e-20 104.0 203 39.4
Cc06_g17190 Coffea canephora HOM05D003950 ORTHO05D004697 4.1e-20 103.2 203 42.9
MD14G1005800 Malus domestica HOM05D003950 ORTHO05D004697 5.4e-20 102.8 172 47.7
QL07p017761 Quercus lobata HOM05D003950 ORTHO05D004697 9.2e-20 102.1 196 44.9
Ciclev10021370m.g Citrus clementina HOM05D003950 ORTHO05D004697 1.2e-19 101.7 206 41.3
Haze_20442 Corylus avellana HOM05D003950 ORTHO05D004697 1.2e-19 101.7 196 44.9
CiPaw.10G125600 Carya illinoinensis HOM05D003950 ORTHO05D004697 1.6e-19 101.3 209 42.1
FAN17G2887 Fragaria x ananassa HOM05D003950 ORTHO05D004697 2.0e-19 100.9 178 41.0
FAN23G1412 Fragaria x ananassa HOM05D003950 ORTHO05D004697 2.0e-19 100.9 192 43.8
Psat1g090600 Pisum sativum HOM05D003950 ORTHO05D004697 2.0e-19 100.9 210 42.4
Hma1.2p1_2382F.1_g321070 Hydrangea macrophylla HOM05D003950 ORTHO05D004697 2.7e-19 100.5 208 41.8
MSTRG.26559 Avicennia marina HOM05D003950 ORTHO05D004697 4.6e-19 99.8 210 40.5
ClCG04G005440 Citrullus lanatus HOM05D003950 ORTHO05D004697 4.6e-19 99.8 201 41.3
CAN.G959.52 Capsicum annuum HOM05D003950 ORTHO05D004697 6.0e-19 99.4 212 39.6
Ca_25687_v3 Cicer arietinum L. HOM05D003950 ORTHO05D004697 6.0e-19 99.4 203 41.4
DCAR_016963 Daucus carota HOM05D003950 ORTHO05D004697 6.0e-19 99.4 212 40.6
Dinv25063 Davidia involucrata HOM05D003950 ORTHO05D004697 6.0e-19 99.4 212 41.0
CARHR268340 Cardamine hirsuta HOM05D003950 ORTHO05D004697 7.8e-19 99.0 207 39.6
Gorai.013G195400 Gossypium raimondii HOM05D003950 ORTHO05D004697 7.8e-19 99.0 194 44.8
Rhsim03G0052400 Rhododendron simsii HOM05D003950 ORTHO05D004697 7.8e-19 99.0 210 41.9
Sopen10g028540 Solanum pennellii HOM05D003950 ORTHO05D004697 7.8e-19 99.0 210 39.5
THA.LOC104821454 Tarenaya hassleriana HOM05D003950 ORTHO05D004697 7.8e-19 99.0 203 39.4
HanXRQChr11g0348201 Helianthus annuus HOM05D003950 ORTHO05D004697 1.3e-18 98.2 181 38.7
SGA_v2.0_scaffold31G12791 Striga asiatica HOM05D003950 ORTHO05D004697 1.3e-18 98.2 220 40.0
TWI60G1471 Tripterygium wilfordii HOM05D003950 ORTHO05D004697 1.3e-18 98.2 201 40.8
FAN28G2715 Fragaria x ananassa HOM05D003950 ORTHO05D004697 1.7e-18 97.8 174 45.4
Actinidia03936 Actinidia chinensis HOM05D003950 ORTHO05D004697 2.3e-18 97.4 203 41.4
ATR0697G272 Amborella trichopoda HOM05D003950 ORTHO05D004697 2.3e-18 97.4 142 46.5
arahy.Tifrunner.gnm1.ann1.DJK1GU Arachis hypogaea HOM05D003950 ORTHO05D004697 2.3e-18 97.4 206 41.3
Solyc10g076860.2 Solanum lycopersicum HOM05D003950 ORTHO05D004697 3.0e-18 97.1 210 39.5
Migut.J00770 Erythranthe guttata HOM05D003950 ORTHO05D004697 3.9e-18 96.7 201 42.3
Eucgr.A02129 Eucalyptus grandis HOM05D003950 ORTHO05D004697 3.9e-18 96.7 207 38.6
MELO3C008816.2 Cucumis melo HOM05D003950 ORTHO05D004697 5.0e-18 96.3 202 40.1
EL10Ac1g01242 Beta vulgaris HOM05D003950 ORTHO05D004697 6.6e-18 95.9 168 46.4
Gohir.D08G236500 Gossypium hirsutum HOM05D003950 ORTHO05D004697 6.6e-18 95.9 200 42.0
Hund15115 Selenicereus undatus HOM05D000185 ORTHO05D000105 6.6e-18 95.9 153 45.8
Atru.chr2.1469 Acer truncatum HOM05D003950 ORTHO05D004697 8.6e-18 95.5 203 40.9
Zm00001eb403220 Zea mays HOM05D003950 ORTHO05D004697 8.6e-18 95.5 172 43.6
Cfa017695 Carpinus fangiana HOM05D003950 ORTHO05D004697 1.1e-17 95.1 211 41.7
HanXRQChr11g0347981 Helianthus annuus HOM05D003950 ORTHO05D004697 1.1e-17 95.1 207 41.1
Thecc.05G244400 Theobroma cacao HOM05D003950 ORTHO05D004697 1.1e-17 95.1 210 42.4
Actinidia37803 Actinidia chinensis HOM05D003950 ORTHO05D004697 1.5e-17 94.7 214 40.7
Cpa.g.sc161.15 Carica papaya HOM05D003950 ORTHO05D004697 1.5e-17 94.7 172 44.2
Gohir.A08G219600 Gossypium hirsutum HOM05D003950 ORTHO05D004697 1.5e-17 94.7 197 42.1
Medtr6g027790 Medicago truncatula HOM05D003950 ORTHO05D004697 1.5e-17 94.7 206 40.3
Glyma.05G089400 Glycine max HOM05D003950 ORTHO05D004697 1.9e-17 94.4 206 41.3
SMO239G0197 Selaginella moellendorffii HOM05D003950 ORTHO05D004697 1.9e-17 94.4 194 39.2
GSVIVG01029976001 Vitis vinifera HOM05D003950 ORTHO05D004697 1.9e-17 94.4 203 39.9
arahy.Tifrunner.gnm1.ann1.3ZLA4U Arachis hypogaea HOM05D001335 ORTHO05D001184 2.5e-17 94.0 177 44.6
A03p14340 Brassica napus HOM05D003950 ORTHO05D004697 2.5e-17 94.0 210 38.1
BolC3t14092H Brassica oleracea HOM05D003950 ORTHO05D004697 2.5e-17 94.0 206 37.9
BraA03t10731Z Brassica rapa HOM05D003950 ORTHO05D004697 2.5e-17 94.0 210 38.1
Sed0018840 Sechium edule HOM05D003950 ORTHO05D004697 2.5e-17 94.0 204 40.2
Os10g0438000 Oryza sativa ssp. japonica HOM05D003950 ORTHO05D004697 4.3e-17 93.2 142 40.8
AUR62027738 Chenopodium quinoa HOM05D003950 ORTHO05D004697 7.3e-17 92.4 164 45.7
Gorai.004G251700 Gossypium raimondii HOM05D003950 ORTHO05D004697 7.3e-17 92.4 210 41.4
MD03G1043800 Malus domestica HOM05D003950 ORTHO05D004697 7.3e-17 92.4 184 35.3
Sc07g0007800 Simmondsia chinensis HOM05D003950 ORTHO05D004697 7.3e-17 92.4 153 43.1
CsaV3_4G012140 Cucumis sativus L. HOM05D003950 ORTHO05D004697 9.5e-17 92.0 202 39.6
Lsat_1_v5_gn_1_56021 Lactuca sativa HOM05D003950 ORTHO05D004697 1.2e-16 91.7 213 39.9
Pp3c19_3550 Physcomitrium patens HOM05D003950 ORTHO05D004697 1.2e-16 91.7 143 41.3
Sp6g16940 Schrenkiella parvula HOM05D003950 ORTHO05D004697 1.6e-16 91.3 206 38.3
HanXRQChr01g0026431 Helianthus annuus HOM05D003950 ORTHO05D004697 2.1e-16 90.9 212 39.2
HPP92_027838 Vanilla planifolia HOM05D003950 ORTHO05D004697 2.1e-16 90.9 155 42.6
Nn6g32388 Nelumbo nucifera HOM05D003950 ORTHO05D004697 2.8e-16 90.5 127 44.9
TPR.G29869 Trifolium pratense HOM05D003950 ORTHO05D004697 2.8e-16 90.5 145 42.8
AT5G55000 Arabidopsis thaliana HOM05D003950 ORTHO05D004697 3.6e-16 90.1 198 39.4
Carub.0008s1529 Capsella rubella HOM05D003950 ORTHO05D004697 3.6e-16 90.1 197 41.6
AagrBONN_evm.TU.Sc2ySwM_344.2926 Anthoceros agrestis HOM05D003950 ORTHO05D004697 4.7e-16 89.7 141 39.0
AL8G30470 Arabidopsis lyrata HOM05D003950 ORTHO05D004697 4.7e-16 89.7 196 39.8
C03p16720 Brassica napus HOM05D003950 ORTHO05D004697 4.7e-16 89.7 206 36.9
CSS0049440 Camellia sinensis var. sinensis HOM05D003950 ORTHO05D004697 4.7e-16 89.7 138 42.8
Lalb_Chr06g0174111 Lupinus albus HOM05D003950 ORTHO05D004697 4.7e-16 89.7 200 41.5
Potri.013G062500 Populus trichocarpa HOM05D003950 ORTHO05D004697 8.1e-16 89.0 138 43.5
BcaC01g06335 Brassica carinata HOM05D003950 ORTHO05D004697 1.8e-15 87.8 206 36.9
AUR62018910 Chenopodium quinoa HOM05D003950 ORTHO05D004697 1.8e-15 87.8 198 40.4
Gohir.D13G167037 Gossypium hirsutum HOM05D003950 ORTHO05D004697 1.8e-15 87.8 146 43.8
HanXRQChr11g0348221 Helianthus annuus HOM05D003950 ORTHO05D004697 1.8e-15 87.8 156 39.7
Os03g0157500 Oryza sativa ssp. japonica HOM05D003950 ORTHO05D004697 1.8e-15 87.8 148 40.5
Aqoxy1G00539 Aquilegia oxysepala HOM05D003950 ORTHO05D004697 2.3e-15 87.4 142 41.5
Thhalv10014237m.g Eutrema salsugineum HOM05D003950 ORTHO05D004697 2.3e-15 87.4 207 37.7
PSO384G0364 Papaver somniferum HOM05D003950 ORTHO05D004697 2.3e-15 87.4 98 55.1
VMungo0464G0013 Vigna mungo HOM05D003950 ORTHO05D004697 2.3e-15 87.4 200 39.0
FvH4_4g13720 Fragaria vesca HOM05D003950 ORTHO05D004697 3.1e-15 87.0 176 42.6
SalBow3G0657 Salvia bowleyana HOM05D003950 ORTHO05D004697 5.2e-15 86.3 147 39.5
MD03G1044000 Malus domestica HOM05D003950 ORTHO05D004697 6.8e-15 85.9 158 37.3
ECA248G3680 Erigeron canadensis HOM05D003950 ORTHO05D004697 8.9e-15 85.5 212 37.7
Potri.019G038400 Populus trichocarpa HOM05D003950 ORTHO05D004697 1.5e-14 84.7 108 50.0
SEGI_22625 Sequoiadendron giganteum HOM05D003950 ORTHO05D004697 1.5e-14 84.7 89 53.9
Aa31LG2G1860 Aethionema arabicum HOM05D003950 ORTHO05D004697 2.0e-14 84.3 168 44.6
MD03G1043900 Malus domestica HOM05D003950 ORTHO05D004697 3.4e-14 83.6 158 36.7
Phvul.004G074000 Phaseolus vulgaris HOM05D003950 ORTHO05D004697 3.4e-14 83.6 203 38.9
CDE07G1488 Ceratophyllum demersum HOM05D003950 ORTHO05D004697 4.4e-14 83.2 201 38.8
FAN11G2374 Fragaria x ananassa HOM05D003950 ORTHO05D004697 4.4e-14 83.2 169 34.3
FAN19G2544 Fragaria x ananassa HOM05D003950 ORTHO05D004697 4.4e-14 83.2 96 52.1
MD11G1047200 Malus domestica HOM05D003950 ORTHO05D004697 5.8e-14 82.8 148 37.2
FvH4_3g41510 Fragaria vesca HOM05D003950 ORTHO05D004697 7.5e-14 82.4 168 33.9
FAN11G3501 Fragaria x ananassa HOM05D003950 ORTHO05D004697 7.5e-14 82.4 169 33.7
TAR623G1392 Trochodendron aralioides HOM05D003950 ORTHO05D004697 7.5e-14 82.4 152 44.1
CDE06G0557 Ceratophyllum demersum HOM05D003950 ORTHO05D004697 9.8e-14 82.0 182 39.0
BcaC01g06337 Brassica carinata HOM05D003950 ORTHO05D004697 1.3e-13 81.6 147 37.4
HanXRQChr11g0348521 Helianthus annuus HOM05D003950 ORTHO05D004697 1.3e-13 81.6 173 39.9
Duzib177G0442 Durio zibethinus HOM05D003950 ORTHO05D004697 1.7e-13 81.3 91 53.8
Sabra19G0049600 Salix brachista HOM05D003950 ORTHO05D004697 1.7e-13 81.3 139 40.3
FvH4_3g41490 Fragaria vesca HOM05D003950 ORTHO05D004697 2.2e-13 80.9 168 33.9
FAN13G1636 Fragaria x ananassa HOM05D003950 ORTHO05D004697 2.9e-13 80.5 171 36.3
RcHm_v2.0_Chr5g0074451 Rosa chinensis HOM05D003950 ORTHO05D004697 3.7e-13 80.1 190 35.3
Nitab4.5_0002131g0010 Nicotiana tabacum HOM05D003950 ORTHO05D004697 4.9e-13 79.7 188 38.3
CSS0011085 Camellia sinensis var. sinensis HOM05D003950 ORTHO05D004697 1.4e-12 78.2 123 41.5
HanXRQChr11g0348211 Helianthus annuus HOM05D003950 ORTHO05D004697 1.9e-12 77.8 139 38.1
HanXRQChr11g0347961 Helianthus annuus HOM05D003950 ORTHO05D004697 3.2e-12 77.0 136 50.0
Prupe.7G009900 Prunus persica HOM05D003950 ORTHO05D004697 9.2e-12 75.5 124 50.0
unitig_899.g15193 Utricularia gibba HOM05D003950 ORTHO05D004697 9.2e-12 75.5 181 39.2
Mapoly0001s0409 Marchantia polymorpha HOM05D003950 ORTHO05D004697 1.6e-11 74.7 107 39.3
vmacro07558 Vaccinium macrocarpon HOM05D003950 ORTHO05D004697 1.6e-11 74.7 172 39.5
MSTRG.10428 Avicennia marina HOM05D003950 ORTHO05D004697 2.7e-11 73.9 155 40.6
HanXRQChr11g0347951 Helianthus annuus HOM05D003950 ORTHO05D004697 3.5e-11 73.6 99 50.5
RcHm_v2.0_Chr5g0074441 Rosa chinensis HOM05D003950 ORTHO05D004697 3.5e-11 73.6 107 43.9
Manes.09G138000 Manihot esculenta HOM05D003950 ORTHO05D004697 4.6e-11 73.2 155 40.0
Pp3c19_20680 Physcomitrium patens HOM05D003950 ORTHO05D004697 1.3e-10 71.6 110 38.2
Dinv05569 Davidia involucrata HOM05D003950 ORTHO05D004697 1.7e-10 71.2 163 40.5
HanXRQChr11g0347991 Helianthus annuus HOM05D003950 ORTHO05D004697 1.7e-10 71.2 98 48.0
Lj1A1064G32 Lonicera japonica HOM05D003950 ORTHO05D004697 3.0e-10 70.5 115 42.6
Nitab4.5_0000121g0060 Nicotiana tabacum HOM05D003950 ORTHO05D004697 3.0e-10 70.5 201 35.8
HanXRQChr11g0347971 Helianthus annuus HOM05D003950 ORTHO05D004697 3.9e-10 70.1 113 40.7
HanXRQChr11g0348281 Helianthus annuus HOM05D003950 ORTHO05D004697 3.9e-10 70.1 121 47.9
HanXRQChr11g0348261 Helianthus annuus HOM05D003950 ORTHO05D004697 8.6e-10 68.9 129 39.5
Pp3c22_8490 Physcomitrium patens HOM05D003950 ORTHO05D004697 1.5e-09 68.2 110 39.1
AUR62043941 Chenopodium quinoa HOM05D003950 ORTHO05D004697 2.5e-09 67.4 136 43.4
FAN25G1848 Fragaria x ananassa HOM05D003950 ORTHO05D004697 2.5e-09 67.4 163 35.0
Sabra13G0055700 Salix brachista HOM05D003950 ORTHO05D004697 3.3e-09 67.0 120 39.2
FAN21G2807 Fragaria x ananassa HOM05D003950 ORTHO05D004697 1.2e-08 65.1 159 35.2
arahy.Tifrunner.gnm1.ann1.Y4106G Arachis hypogaea HOM05D003950 ORTHO05D004697 3.6e-08 63.5 90 46.7
arahy.Tifrunner.gnm1.ann1.NAY1Y6 Arachis hypogaea HOM05D003950 ORTHO05D004697 8.1e-08 62.4 90 45.6
Pp3c8_19020 Physcomitrium patens HOM05D003950 ORTHO05D004697 8.9e-07 58.9 58 44.8
CBR_g23172 Chara braunii HOM05D003950 ORTHO05D004697 2.0e-06 57.8 109 33.9
arahy.Tifrunner.gnm1.ann1.045CRL Arachis hypogaea HOM05D003950 ORTHO05D004697 3.4e-06 57.0 96 41.7
SEGI_36015 Sequoiadendron giganteum HOM05D003950 ORTHO05D004697 5.8e-06 56.2 44 59.1


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