Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_12720 Physcomitrium patens HOM05D000238 ORTHO05D315253 6.7e-40 166.8 77 100.0
Pp3c8_25110 Physcomitrium patens HOM05D000238 ORTHO05D002999 1.6e-09 65.9 39 74.4
Pp3c8_25140 Physcomitrium patens HOM05D000238 ORTHO05D002999 1.6e-09 65.9 39 74.4
AL1G21930 Arabidopsis lyrata HOM05D000238 ORTHO05D002999 9.7e-07 56.6 37 62.2
AT1G10950 Arabidopsis thaliana HOM05D000238 ORTHO05D002999 9.7e-07 56.6 37 62.2
CAN.G798.25 Capsicum annuum HOM05D000238 ORTHO05D002999 9.7e-07 56.6 37 62.2
Nitab4.5_0002698g0140 Nicotiana tabacum HOM05D000238 ORTHO05D002999 9.7e-07 56.6 39 56.4
Peaxi162Scf00152g01428 Petunia axillaris HOM05D000238 ORTHO05D002999 9.7e-07 56.6 37 62.2
Hma1.2p1_1197F.1_g266200 Hydrangea macrophylla HOM05D000238 ORTHO05D002999 1.3e-06 56.2 36 63.9
Nitab4.5_0004129g0030 Nicotiana tabacum HOM05D000238 ORTHO05D002999 1.7e-06 55.8 37 59.5
Solyc01g103930.3 Solanum lycopersicum HOM05D000238 ORTHO05D002999 2.2e-06 55.5 37 59.5
Sopen01g046320 Solanum pennellii HOM05D000238 ORTHO05D002999 2.2e-06 55.5 37 59.5
PGSC0003DMG400004531 Solanum tuberosum HOM05D000238 ORTHO05D002999 2.2e-06 55.5 37 59.5
CARHR011170 Cardamine hirsuta HOM05D000238 ORTHO05D002999 2.8e-06 55.1 37 59.5
CiPaw.06G145700 Carya illinoinensis HOM05D000238 ORTHO05D002999 2.8e-06 55.1 39 53.8
Os11g0181100 Oryza sativa ssp. japonica HOM05D000238 ORTHO05D002999 2.8e-06 55.1 37 56.8
Zm00001eb091270 Zea mays HOM05D000238 ORTHO05D002999 2.8e-06 55.1 37 56.8
Peaxi162Scf00011g00743 Petunia axillaris HOM05D000238 ORTHO05D002999 3.7e-06 54.7 36 61.1
QL02p099486 Quercus lobata HOM05D000238 ORTHO05D002999 3.7e-06 54.7 36 58.3
THA.LOC104823639 Tarenaya hassleriana HOM05D000238 ORTHO05D002999 3.7e-06 54.7 37 56.8
ATR1134G037 Amborella trichopoda HOM05D000238 ORTHO05D002999 6.3e-06 53.9 37 56.8
AagrBONN_evm.TU.Sc2ySwM_228.217 Anthoceros agrestis HOM05D000238 ORTHO05D002999 6.3e-06 53.9 41 51.2
Carub.0001s1053 Capsella rubella HOM05D000238 ORTHO05D002999 6.3e-06 53.9 37 56.8
Thhalv10007167m.g Eutrema salsugineum HOM05D000238 ORTHO05D002999 6.3e-06 53.9 37 56.8
Nn1g08368 Nelumbo nucifera HOM05D000238 ORTHO05D002999 6.3e-06 53.9 36 58.3
Nn1g08421 Nelumbo nucifera HOM05D000238 ORTHO05D002999 6.3e-06 53.9 36 58.3
PGSC0003DMG400009753 Solanum tuberosum HOM05D000238 ORTHO05D002999 6.3e-06 53.9 37 56.8
Eucgr.I02743 Eucalyptus grandis HOM05D000238 ORTHO05D002999 8.2e-06 53.5 36 58.3
Os02g0552000 Oryza sativa ssp. japonica HOM05D000238 ORTHO05D002999 8.2e-06 53.5 37 54.1
Phvul.006G216500 Phaseolus vulgaris HOM05D000238 ORTHO05D002999 8.2e-06 53.5 36 58.3
Potri.003G015300 Populus trichocarpa HOM05D000238 ORTHO05D002999 8.2e-06 53.5 37 59.5
PGR042G2264 Punica granatum HOM05D000238 ORTHO05D002999 8.2e-06 53.5 36 58.3
RcHm_v2.0_Chr7g0221061 Rosa chinensis HOM05D000238 ORTHO05D002999 8.2e-06 53.5 37 59.5
SEGI_34965 Sequoiadendron giganteum HOM05D000238 ORTHO05D002999 8.2e-06 53.5 37 56.8
THA.LOC104809614 Tarenaya hassleriana HOM05D000238 ORTHO05D002999 8.2e-06 53.5 36 55.6
THA.LOC104819185 Tarenaya hassleriana HOM05D000238 ORTHO05D002999 8.2e-06 53.5 37 54.1


User provided reference genes

Program Settings