Gene: AT1G10950
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G10950
- Transcript Identifier AT1G10950.1
- Gene Type Coding gene
- Location Chr1 : 3659322-3663622 : positive
Gene Family Information
- ID HOM05D000238
- #Genes/#Species 1763/100
- Phylogenetic origin
- ID ORTHO05D002999
- #Genes/#Species 249/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G10950.1
- symbol TMN1
- Alias AtTMN1,EMP12,endomembrane protein 12
- uniprot Q940G0
Descriptions
- Description transmembrane nine 1
- Computational description transmembrane nine 1 (TMN1); LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1611 Blast hits to 1538 proteins in 326 species: Archae - 0; Bacteria - 16; Metazoa - 610; Fungi - 273; Plants - 454; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0072657 | IBA | Gene Ontology | protein localization to membrane | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005802 | IDA | GOA Database | trans-Golgi network | |
| GO:0005802 | HDA IBA | Gene Ontology | trans-Golgi network | 1 2 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IBA | Gene Ontology | membrane | 1 |
| GO:0005768 | IDA IEA | GOA Database | endosome | |
| GO:0005768 | HDA IBA | Gene Ontology | endosome | 1 2 |
| GO:0005794 | IDA IEA | GOA Database | Golgi apparatus | |
| GO:0005794 | HDA | Gene Ontology | Golgi apparatus | 3 |
| GO:0010008 | IEA | GOA Database | endosome membrane | |
| GO:0000139 | IEA | GOA Database | Golgi membrane | |
| GO:0005576 | HDA ISM | Gene Ontology | extracellular region | 4 |
| GO:0000137 | HDA | Gene Ontology | Golgi cis cisterna | 5 |
| GO:0005801 | IDA | Gene Ontology | cis-Golgi network | 6 |
| GO:0005797 | IDA | Gene Ontology | Golgi medial cisterna | 6 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004240 | Nonaspanin (TM9SF) |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |