Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 1.6e-288 995.3 481 100.0
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 1.2e-224 783.1 418 86.6
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 3.5e-219 765.0 422 83.9
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 3.5e-211 738.4 469 75.7
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 6.5e-210 734.2 465 74.6
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.1e-209 733.4 430 79.3
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 1.5e-209 733.0 433 79.4
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 6.1e-208 727.6 432 78.5
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 1.4e-207 726.5 439 77.7
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 1.8e-207 726.1 445 77.3
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 2.3e-207 725.7 445 76.0
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 4.0e-207 724.9 437 77.1
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 5.2e-207 724.5 421 79.6
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 8.8e-207 723.8 424 80.0
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 8.8e-207 723.8 445 77.5
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 8.8e-207 723.8 461 74.8
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 1.5e-206 723.0 447 75.2
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 1.5e-206 723.0 431 78.0
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 2.0e-206 722.6 445 76.4
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 2.6e-206 722.2 442 76.9
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 3.3e-206 721.8 440 76.6
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 3.3e-206 721.8 418 79.2
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 3.3e-206 721.8 448 75.2
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 4.4e-206 721.5 418 79.9
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 7.5e-206 720.7 451 75.6
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 9.7e-206 720.3 418 79.9
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 1.7e-205 719.5 438 75.8
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 1.7e-205 719.5 420 78.8
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 2.2e-205 719.2 453 75.1
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 2.2e-205 719.2 418 78.7
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 2.8e-205 718.8 420 78.3
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 3.7e-205 718.4 442 76.0
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 3.7e-205 718.4 421 79.6
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 4.8e-205 718.0 418 80.1
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 6.3e-205 717.6 431 76.6
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 8.3e-205 717.2 418 80.4
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 8.3e-205 717.2 420 78.3
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 1.1e-204 716.8 465 73.3
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 1.4e-204 716.5 418 79.9
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.4e-204 716.5 420 78.1
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.8e-204 716.1 463 73.0
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.8e-204 716.1 418 79.9
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.8e-204 716.1 418 79.9
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.4e-204 715.7 419 79.2
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.4e-204 715.7 418 79.2
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 3.1e-204 715.3 418 79.9
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 4.1e-204 714.9 418 79.9
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 5.3e-204 714.5 418 78.7
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 5.3e-204 714.5 449 75.3
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 7.0e-204 714.1 418 79.9
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 9.1e-204 713.8 441 76.0
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 9.1e-204 713.8 451 75.2
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 1.2e-203 713.4 439 75.6
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 1.6e-203 713.0 418 79.7
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 2.0e-203 712.6 418 79.7
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 2.7e-203 712.2 434 76.5
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 3.5e-203 711.8 418 79.4
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 3.5e-203 711.8 435 76.1
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 4.5e-203 711.4 452 73.2
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.0e-202 710.3 435 76.1
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 1.0e-202 710.3 430 76.3
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 1.0e-202 710.3 418 78.5
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.0e-202 710.3 418 77.8
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 1.3e-202 709.9 412 79.1
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 1.7e-202 709.5 418 78.0
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 2.9e-202 708.8 420 77.4
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 2.9e-202 708.8 425 77.6
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 3.8e-202 708.4 418 79.4
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 5.0e-202 708.0 418 78.5
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 1.1e-201 706.8 454 74.0
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 1.5e-201 706.4 418 77.3
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 3.2e-201 705.3 451 74.7
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 2.7e-200 702.2 433 75.5
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 3.6e-200 701.8 470 72.3
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 1.4e-199 699.9 447 74.5
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 6.8e-199 697.6 454 72.2
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 3.7e-197 691.8 463 71.3
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 7.7e-195 684.1 399 79.9
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 1.7e-194 682.9 475 69.1
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 6.6e-194 681.0 430 74.7
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.5e-193 679.9 443 71.6
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 4.0e-191 671.8 423 74.7
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 4.0e-191 671.8 418 75.4
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 1.5e-190 669.8 403 77.4
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 1.4e-188 663.3 436 71.6
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.3e-183 646.0 468 67.7
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 2.6e-182 642.5 535 60.7
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 9.8e-182 640.6 378 78.3
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.2e-181 639.4 422 71.3
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 4.6e-179 631.7 435 69.7
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 4.3e-177 625.2 473 65.1
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 4.7e-176 621.7 529 59.9
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 3.1e-175 619.0 383 77.0
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 3.4e-174 615.5 361 78.1
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 2.9e-173 612.5 380 75.8
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 2.9e-173 612.5 418 69.4
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 4.6e-171 605.1 423 68.1
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 1.5e-169 600.1 446 64.6
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 1.7e-165 586.6 355 75.8
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.2e-160 570.5 395 69.1
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 4.4e-150 535.4 373 68.4
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 2.3e-146 523.1 491 58.0
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 3.5e-139 499.2 373 63.5
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 8.4e-133 478.0 323 72.4
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 8.7e-130 468.0 282 78.7
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 4.0e-127 459.1 270 78.9
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 5.9e-118 428.7 436 52.1
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 5.7e-105 385.6 257 72.0
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.1e-59 234.2 143 72.7
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 2.0e-57 227.6 187 60.4
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 3.4e-57 226.9 143 69.9
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.2e-33 148.7 85 72.9
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 1.4e-31 141.7 81 79.0
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 5.5e-23 113.2 79 67.1
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 2.1e-19 101.3 57 80.7
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 7.9e-14 82.8 49 77.6
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.8e-10 71.6 42 78.6
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 2.4e-10 71.2 43 76.7
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.2e-09 68.9 42 73.8
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 7.2e-07 59.7 40 70.0


User provided reference genes

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