Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 1.3e-160 569.7 290 100.0
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 1.4e-69 267.3 176 71.0
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 8.8e-69 264.6 174 69.5
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.0e-68 263.5 169 71.6
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 2.0e-68 263.5 183 67.8
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 2.0e-68 263.5 183 67.8
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 2.6e-68 263.1 174 69.5
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 3.4e-68 262.7 176 69.9
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 5.7e-68 261.9 176 71.6
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 7.5e-68 261.5 176 69.3
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 9.8e-68 261.2 185 67.6
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 1.7e-67 260.4 178 67.4
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 2.2e-67 260.0 183 68.3
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 2.8e-67 259.6 174 73.0
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 4.8e-67 258.8 176 70.5
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 6.3e-67 258.5 182 64.3
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 8.3e-67 258.1 175 70.3
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 8.3e-67 258.1 179 68.2
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 1.8e-66 256.9 176 68.2
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 1.8e-66 256.9 179 67.6
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.8e-66 256.9 165 71.5
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 3.1e-66 256.1 178 67.4
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 7.0e-66 255.0 178 65.7
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 7.0e-66 255.0 181 65.2
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 9.1e-66 254.6 176 67.6
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 9.1e-66 254.6 165 71.5
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 1.2e-65 254.2 183 66.1
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 2.0e-65 253.4 170 68.2
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 2.0e-65 253.4 182 65.4
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 2.7e-65 253.1 179 67.6
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 3.5e-65 252.7 243 56.0
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 3.5e-65 252.7 175 66.3
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 4.5e-65 252.3 168 70.8
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 4.5e-65 252.3 175 64.6
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 5.9e-65 251.9 191 63.4
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 5.9e-65 251.9 182 66.5
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 7.7e-65 251.5 183 65.6
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 7.7e-65 251.5 174 67.2
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 1.0e-64 251.1 169 68.6
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 1.0e-64 251.1 169 69.2
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 1.0e-64 251.1 225 57.8
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 1.0e-64 251.1 213 59.6
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 1.3e-64 250.8 181 65.2
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 1.3e-64 250.8 181 65.2
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.3e-64 250.8 174 66.7
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 1.3e-64 250.8 207 61.4
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 1.3e-64 250.8 187 65.2
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 2.2e-64 250.0 175 66.9
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 2.2e-64 250.0 169 67.5
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 2.9e-64 249.6 167 68.9
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 2.9e-64 249.6 176 67.0
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 2.9e-64 249.6 175 64.0
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 3.8e-64 249.2 170 66.5
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 5.0e-64 248.8 175 66.3
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 5.0e-64 248.8 175 66.9
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 5.0e-64 248.8 175 66.3
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 5.0e-64 248.8 175 66.3
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 5.0e-64 248.8 176 67.6
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 6.5e-64 248.4 164 69.5
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 6.5e-64 248.4 178 66.9
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 6.5e-64 248.4 179 65.9
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 8.5e-64 248.1 176 65.9
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 8.5e-64 248.1 175 67.4
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 8.5e-64 248.1 165 69.7
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 1.1e-63 247.7 179 64.2
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 1.5e-63 247.3 174 66.7
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 1.5e-63 247.3 174 66.7
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 1.5e-63 247.3 172 65.7
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 1.5e-63 247.3 179 66.5
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 4.2e-63 245.7 173 66.5
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 5.5e-63 245.4 178 66.9
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 7.2e-63 245.0 176 66.5
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 7.2e-63 245.0 165 69.1
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 9.5e-63 244.6 186 61.3
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 9.5e-63 244.6 177 65.0
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 1.6e-62 243.8 170 67.6
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 2.8e-62 243.0 175 65.7
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 2.8e-62 243.0 179 63.7
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 3.6e-62 242.7 168 66.7
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 8.0e-62 241.5 169 66.9
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 1.0e-61 241.1 199 59.3
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 1.4e-61 240.7 151 72.8
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 1.8e-61 240.4 177 65.0
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 2.3e-61 240.0 201 58.2
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 2.3e-61 240.0 166 66.9
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 4.0e-61 239.2 174 64.4
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 4.0e-61 239.2 187 59.9
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 2.6e-60 236.5 161 66.5
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 3.4e-60 236.1 164 65.9
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 1.3e-59 234.2 160 68.1
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 3.7e-59 232.6 188 58.0
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 6.3e-59 231.9 213 54.9
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 3.0e-53 213.0 180 60.6
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.7e-51 207.2 189 56.1
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 1.4e-50 204.1 169 59.2
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 1.2e-49 201.1 177 56.5
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.1e-47 194.5 173 56.6
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 4.3e-47 192.6 131 67.2
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 4.0e-45 186.0 181 52.5
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 8.9e-45 184.9 174 54.0
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 1.2e-44 184.5 180 54.4
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 5.8e-44 182.2 126 65.9
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 6.4e-43 178.7 139 61.9
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 7.8e-41 171.8 165 53.9
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 2.3e-40 170.2 113 67.3
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 8.1e-38 161.8 110 68.2
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 1.4e-37 161.0 110 67.3
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 6.8e-37 158.7 106 68.9
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 6.8e-37 158.7 109 67.9
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 8.9e-37 158.3 110 66.4
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 3.7e-35 152.9 117 63.2
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 4.9e-35 152.5 118 63.6
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 1.4e-34 151.0 110 65.5
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 1.2e-20 104.8 153 38.6
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 2.7e-17 93.6 186 30.1
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 6.0e-17 92.4 174 31.0
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 2.3e-16 90.5 184 29.3
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 5.1e-16 89.4 69 63.8
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.2e-12 78.2 56 64.3
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 5.1e-08 62.8 65 47.7
AagrBONN_evm.TU.Sc2ySwM_340.195 Anthoceros agrestis HOM05D006649 ORTHO05D023509 2.1e-06 57.4 101 33.7


User provided reference genes

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