Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_10430 Physcomitrium patens HOM05D001200 ORTHO05D002731 4.0e-34 147.5 73 100.0
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 7.8e-14 80.1 48 72.9
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 2.9e-13 78.2 48 77.1
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 2.9e-13 78.2 48 77.1
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 6.6e-13 77.0 47 76.6
RcHm_v2.0_CPg0502801 Rosa chinensis HOM05D001200 ORTHO05D002731 6.6e-13 77.0 47 76.6
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 8.6e-13 76.6 48 77.1
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 8.6e-13 76.6 48 77.1
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 8.6e-13 76.6 48 77.1
HanXRQChr08g0211971 Helianthus annuus HOM05D001200 ORTHO05D002731 8.6e-13 76.6 48 77.1
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 8.6e-13 76.6 48 77.1
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 8.6e-13 76.6 48 77.1
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 8.6e-13 76.6 48 77.1
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 8.6e-13 76.6 49 71.4
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 8.6e-13 76.6 47 76.6
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 1.5e-12 75.9 48 75.0
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 1.9e-12 75.5 48 72.9
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 1.9e-12 75.5 48 75.0
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 1.9e-12 75.5 47 74.5
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 2.5e-12 75.1 51 70.6
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 2.5e-12 75.1 47 74.5
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 4.3e-12 74.3 47 72.3
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 4.3e-12 74.3 47 72.3
CsaV3_UNG210140 Cucumis sativus L. HOM05D001200 ORTHO05D002731 4.3e-12 74.3 47 74.5
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 4.3e-12 74.3 48 77.1
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 5.6e-12 73.9 47 72.3
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 5.6e-12 73.9 47 72.3
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 5.6e-12 73.9 47 72.3
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 5.6e-12 73.9 47 72.3
BolSC29t60544H Brassica oleracea HOM05D001200 ORTHO05D002731 5.6e-12 73.9 47 72.3
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 5.6e-12 73.9 47 72.3
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 5.6e-12 73.9 47 72.3
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 5.6e-12 73.9 47 72.3
Ciclev10010880m.g Citrus clementina HOM05D001200 ORTHO05D002731 5.6e-12 73.9 47 74.5
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 7.3e-12 73.6 47 72.3
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 7.3e-12 73.6 47 72.3
BolSC44t60820H Brassica oleracea HOM05D001200 ORTHO05D002731 7.3e-12 73.6 47 72.3
BolSC46t60960H Brassica oleracea HOM05D001200 ORTHO05D002731 7.3e-12 73.6 47 72.3
BolSC47t61066H Brassica oleracea HOM05D001200 ORTHO05D002731 7.3e-12 73.6 47 72.3
MD04G1189100 Malus domestica HOM05D001200 ORTHO05D002731 9.5e-12 73.2 47 72.3
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 9.5e-12 73.2 48 68.8
Lalb_Chr07g0191761 Lupinus albus HOM05D001200 ORTHO05D002731 1.2e-11 72.8 48 70.8
Lalb_Chr23g0274791 Lupinus albus HOM05D001200 ORTHO05D002731 1.2e-11 72.8 48 70.8
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 1.6e-11 72.4 47 74.5
BolC2t08908H Brassica oleracea HOM05D001200 ORTHO05D002731 2.8e-11 71.6 47 72.3
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 1.0e-10 69.7 48 68.8
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 1.8e-10 68.9 47 68.1
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 1.8e-10 68.9 47 68.1
HanXRQChr17g0557761 Helianthus annuus HOM05D001200 ORTHO05D002731 2.3e-10 68.6 39 82.1
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 6.8e-10 67.0 47 66.0
BraSC59t46528Z Brassica rapa HOM05D001200 ORTHO05D002731 2.6e-09 65.1 47 61.7
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 3.4e-09 64.7 41 70.7
arahy.Tifrunner.gnm1.ann1.2QK9Z7 Arachis hypogaea HOM05D001200 ORTHO05D002731 5.8e-09 63.9 41 68.3
C06p42250 Brassica napus HOM05D001200 ORTHO05D002731 1.3e-08 62.8 40 67.5
Ciclev10013969m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.3e-08 62.8 40 70.0
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.3e-08 62.8 40 70.0
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.3e-08 62.8 40 70.0
Ciclev10030459m.g Citrus clementina HOM05D001200 ORTHO05D010401 1.3e-08 62.8 40 70.0
Migut.D01384 Erythranthe guttata HOM05D001200 ORTHO05D002731 1.7e-08 62.4 38 71.1
GSVIVG01004976001 Vitis vinifera HOM05D001200 ORTHO05D010401 1.7e-08 62.4 40 67.5
Hund08793 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund12716 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund12843 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund23968 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund27631 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund27678 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund27755 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund27831 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund28438 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund28448 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund28536 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund28587 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund28596 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund28613 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund28850 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund28880 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund28937 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund28946 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund28951 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund28954 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund28961 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund28974 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund28979 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29026 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29089 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29109 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29179 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29186 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29244 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29247 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29251 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29254 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29261 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29273 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29277 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29281 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29285 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29288 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29316 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29434 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29438 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29453 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29499 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29654 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29713 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29755 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29814 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund29818 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund30036 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund30039 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund30120 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund30177 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund30365 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Hund30388 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.2e-08 62.0 54 53.7
Medtr7g075220 Medicago truncatula HOM05D000504 ORTHO05D002731 2.9e-08 61.6 47 61.7
CSS0038532 Camellia sinensis var. sinensis HOM05D001200 ORTHO05D002731 6.4e-08 60.5 43 62.8
CSS0005564 Camellia sinensis var. sinensis HOM05D001200 ORTHO05D002731 8.3e-08 60.1 43 60.5
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 8.3e-08 60.1 38 68.4
Medtr2g103350 Medicago truncatula HOM05D001200 ORTHO05D002731 1.1e-07 59.7 49 53.1
Medtr7g086590 Medicago truncatula HOM05D001200 ORTHO05D002731 5.4e-07 57.4 40 62.5
Medtr1g081540 Medicago truncatula HOM05D001200 ORTHO05D002731 7.0e-07 57.0 44 56.8
Medtr2g048620 Medicago truncatula HOM05D001200 ORTHO05D002731 9.2e-07 56.6 45 53.3
Medtr3g073110 Medicago truncatula HOM05D001200 ORTHO05D002731 1.2e-06 56.2 41 61.0
Medtr1g085100 Medicago truncatula HOM05D001200 ORTHO05D002731 1.6e-06 55.8 44 54.5
Ciclev10006660m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.5e-06 54.7 40 65.0
SMO086G0020 Selaginella moellendorffii HOM05D001200 ORTHO05D002731 3.5e-06 54.7 46 65.2
Medtr3g082380 Medicago truncatula HOM05D001200 ORTHO05D002731 4.6e-06 54.3 44 56.8
Medtr7g108460 Medicago truncatula HOM05D001200 ORTHO05D002731 4.6e-06 54.3 44 54.5
Medtr4g080900 Medicago truncatula HOM05D001200 ORTHO05D002731 6.0e-06 53.9 52 51.9


User provided reference genes

Program Settings