Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 9.3e-170 600.1 304 100.0
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 9.2e-85 317.8 312 54.2
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 4.9e-78 295.4 241 60.2
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 2.7e-76 289.7 263 57.0
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 1.3e-75 287.3 299 50.8
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 6.6e-75 285.0 245 56.7
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 1.9e-74 283.5 288 52.8
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 1.9e-74 283.5 291 52.6
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 2.5e-74 283.1 282 54.3
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 2.5e-74 283.1 246 58.1
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 5.6e-74 282.0 239 59.4
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 5.6e-74 282.0 245 58.4
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 9.6e-74 281.2 315 50.2
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 9.6e-74 281.2 289 51.9
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 6.2e-73 278.5 282 52.5
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 8.1e-73 278.1 241 58.5
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 1.1e-72 277.7 239 58.2
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 1.4e-72 277.3 226 58.4
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 2.4e-72 276.6 287 50.9
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 3.1e-72 276.2 285 51.2
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 3.1e-72 276.2 278 52.2
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 4.0e-72 275.8 245 55.9
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 5.2e-72 275.4 243 58.0
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 6.8e-72 275.0 204 64.7
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 6.8e-72 275.0 204 64.7
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 6.8e-72 275.0 204 64.7
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 8.9e-72 274.6 297 49.5
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 8.9e-72 274.6 297 49.5
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 1.2e-71 274.2 243 56.0
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 2.0e-71 273.5 243 58.4
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 2.6e-71 273.1 204 64.2
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 5.8e-71 271.9 243 56.4
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 5.8e-71 271.9 204 62.3
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 7.6e-71 271.6 241 58.5
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 7.6e-71 271.6 243 54.7
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 7.6e-71 271.6 243 54.7
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 7.6e-71 271.6 239 57.7
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 7.6e-71 271.6 252 54.8
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 9.9e-71 271.2 243 54.7
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 9.9e-71 271.2 204 63.7
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 1.3e-70 270.8 215 59.5
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.3e-70 270.8 240 56.7
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 1.3e-70 270.8 299 50.8
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 1.7e-70 270.4 243 55.6
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 1.7e-70 270.4 239 56.5
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 2.2e-70 270.0 240 56.7
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 2.2e-70 270.0 268 51.9
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 2.9e-70 269.6 241 56.0
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 3.8e-70 269.2 263 52.1
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 4.9e-70 268.9 216 60.6
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 6.4e-70 268.5 218 59.2
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 6.4e-70 268.5 204 62.3
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 8.4e-70 268.1 204 61.3
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 8.4e-70 268.1 299 48.5
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 8.4e-70 268.1 257 51.4
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 1.4e-69 267.3 265 53.2
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 5.4e-69 265.4 204 62.7
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 7.1e-69 265.0 232 56.0
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 7.1e-69 265.0 239 55.2
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 9.3e-69 264.6 237 56.5
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 1.2e-68 264.2 204 59.8
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 1.2e-68 264.2 297 50.2
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 2.7e-68 263.1 248 54.0
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 2.7e-68 263.1 314 47.8
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 2.7e-68 263.1 253 51.8
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 3.5e-68 262.7 205 62.4
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 3.5e-68 262.7 205 62.4
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 7.8e-68 261.5 314 48.4
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 7.8e-68 261.5 248 52.4
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 1.0e-67 261.2 204 59.3
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 1.0e-67 261.2 247 51.4
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 1.0e-67 261.2 247 51.8
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 2.3e-67 260.0 267 49.8
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 6.6e-67 258.5 204 61.8
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 1.1e-66 257.7 244 52.9
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 1.5e-66 257.3 203 59.1
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 1.9e-66 256.9 287 49.1
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 1.6e-65 253.8 221 56.1
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 6.2e-65 251.9 303 46.9
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 6.2e-65 251.9 204 57.4
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 1.1e-64 251.1 242 52.5
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 1.2e-63 247.7 213 57.7
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 5.8e-63 245.4 243 50.6
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 7.6e-63 245.0 223 55.6
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 1.0e-59 234.6 288 46.9
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 3.0e-59 233.0 247 49.4
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 5.1e-59 232.3 358 40.8
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 6.6e-59 231.9 240 50.4
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 3.3e-58 229.6 177 63.8
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 2.8e-57 226.5 204 56.4
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 2.8e-57 226.5 204 56.4
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 8.1e-57 224.9 296 43.6
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 1.1e-53 214.5 274 43.8
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.4e-53 214.2 212 54.2
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 1.1e-50 204.5 211 49.8
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 4.8e-49 199.1 154 64.3
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 9.0e-48 194.9 167 56.3
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 1.2e-47 194.5 300 40.7
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 2.6e-47 193.4 197 53.3
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 4.2e-45 186.0 130 70.8
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 9.3e-45 184.9 202 49.5
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.0e-43 181.4 208 50.0
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.0e-43 181.4 208 50.0
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 1.4e-40 171.0 223 46.6
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 1.3e-38 164.5 174 49.4
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 2.1e-36 157.1 195 41.5
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 2.7e-36 156.8 175 49.7
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 3.1e-32 143.3 101 62.4
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 1.0e-22 111.7 107 49.5
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 4.5e-15 86.3 99 48.5
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 6.5e-06 55.8 52 51.9


User provided reference genes

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