Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c24_4970 Physcomitrium patens HOM05D004501 ORTHO05D004944 0.0e+00 1936.4 968 100.0
Pp3c10_5410 Physcomitrium patens HOM05D004501 ORTHO05D004944 0.0e+00 1391.3 940 75.3
Mapoly0088s0017 Marchantia polymorpha HOM05D004501 ORTHO05D004944 9.5e-192 674.9 770 51.6
SEGI_38311 Sequoiadendron giganteum HOM05D004501 ORTHO05D004944 3.5e-186 656.4 1068 40.5
ATR1145G029 Amborella trichopoda HOM05D004501 ORTHO05D004944 1.4e-166 591.3 1044 40.0
CiPaw.11G082400 Carya illinoinensis HOM05D004501 ORTHO05D004944 7.8e-162 575.5 974 40.1
Cfa012694 Carpinus fangiana HOM05D004501 ORTHO05D004944 3.0e-161 573.5 687 47.6
Potri.001G155200 Populus trichocarpa HOM05D004501 ORTHO05D004944 5.1e-161 572.8 698 47.4
SMO356G0217 Selaginella moellendorffii HOM05D004501 ORTHO05D004944 3.3e-160 570.1 642 48.0
Eucgr.E00402 Eucalyptus grandis HOM05D004501 ORTHO05D004944 5.6e-160 569.3 730 46.4
Haze_07939 Corylus avellana HOM05D004501 ORTHO05D004944 2.3e-158 563.9 964 39.7
QL12p011237 Quercus lobata HOM05D004501 ORTHO05D004944 3.1e-158 563.5 971 40.2
Lj2C224T11 Lonicera japonica HOM05D004501 ORTHO05D004944 4.0e-158 563.1 750 45.2
Atru.chr9.1263 Acer truncatum HOM05D004501 ORTHO05D004944 5.2e-158 562.8 986 39.1
THA.LOC104810067 Tarenaya hassleriana HOM05D004501 ORTHO05D004944 8.9e-158 562.0 663 47.5
PGR042G0255 Punica granatum HOM05D004501 ORTHO05D004944 3.4e-157 560.1 737 44.8
Sabra01G0124800 Salix brachista HOM05D004501 ORTHO05D004944 2.2e-156 557.4 769 44.3
Ciclev10018712m.g Citrus clementina HOM05D004501 ORTHO05D004944 3.2e-155 553.5 980 39.1
MSTRG.12127 Avicennia marina HOM05D004501 ORTHO05D004944 2.1e-154 550.8 668 47.5
SalBow6G6502 Salvia bowleyana HOM05D004501 ORTHO05D004944 3.5e-154 550.1 727 44.7
MD04G1060900 Malus domestica HOM05D004501 ORTHO05D004944 4.6e-154 549.7 663 46.3
Lj2g0006235 Lotus japonicus HOM05D004501 ORTHO05D004944 6.0e-154 549.3 656 47.3
Glyma.01G207400 Glycine max HOM05D004501 ORTHO05D004944 7.8e-154 548.9 663 46.8
Migut.A01144 Erythranthe guttata HOM05D004501 ORTHO05D004944 1.7e-153 547.7 715 46.2
PSO732G0005 Papaver somniferum HOM05D004501 ORTHO05D004944 1.7e-153 547.7 1002 37.5
COL.COLO4_37109 Corchorus olitorius HOM05D004501 ORTHO05D004944 2.3e-153 547.4 666 47.4
TWI15G0617 Tripterygium wilfordii HOM05D004501 ORTHO05D004944 6.6e-153 545.8 986 37.4
Nn1g00910 Nelumbo nucifera HOM05D004501 ORTHO05D004944 1.5e-152 544.7 680 46.8
CANSAT21G1630 Cannabis sativa HOM05D004501 ORTHO05D004944 1.9e-152 544.3 952 38.6
Psat2g176440 Pisum sativum HOM05D004501 ORTHO05D004944 1.9e-152 544.3 938 38.9
Thecc.03G247200 Theobroma cacao HOM05D004501 ORTHO05D004944 4.3e-152 543.1 984 39.4
vmacro14139 Vaccinium macrocarpon HOM05D004501 ORTHO05D004944 1.2e-151 541.6 955 40.6
Aqoxy7G03746 Aquilegia oxysepala HOM05D004501 ORTHO05D004944 2.1e-151 540.8 968 38.6
CARHR134700 Cardamine hirsuta HOM05D004501 ORTHO05D004944 2.1e-151 540.8 738 42.3
FvH4_5g19540 Fragaria vesca HOM05D004501 ORTHO05D004944 3.6e-151 540.0 665 46.6
Gohir.D12G217800 Gossypium hirsutum HOM05D004501 ORTHO05D004944 3.6e-151 540.0 699 45.4
Gorai.008G233400 Gossypium raimondii HOM05D004501 ORTHO05D004944 3.6e-151 540.0 699 45.2
Cc08_g12070 Coffea canephora HOM05D004501 ORTHO05D004944 4.7e-151 539.7 692 46.0
Medtr5g012940 Medicago truncatula HOM05D004501 ORTHO05D004944 4.7e-151 539.7 939 39.6
Carub.0004s2192 Capsella rubella HOM05D004501 ORTHO05D004944 6.2e-151 539.3 717 43.9
Gohir.A12G215200 Gossypium hirsutum HOM05D004501 ORTHO05D004944 6.2e-151 539.3 699 45.1
Aa31LG5G19800 Aethionema arabicum HOM05D004501 ORTHO05D004944 8.1e-151 538.9 661 45.1
PSO675G3024 Papaver somniferum HOM05D004501 ORTHO05D004944 1.4e-150 538.1 992 38.3
Sabra03G0049600 Salix brachista HOM05D004501 ORTHO05D004944 1.8e-150 537.7 692 45.7
Ca_24594_v3 Cicer arietinum L. HOM05D004501 ORTHO05D004944 5.2e-150 536.2 938 38.0
RcHm_v2.0_Chr7g0204151 Rosa chinensis HOM05D004501 ORTHO05D004944 5.2e-150 536.2 984 37.7
Thhalv10016197m.g Eutrema salsugineum HOM05D004501 ORTHO05D004944 8.9e-150 535.4 701 43.5
Lalb_Chr16g0379471 Lupinus albus HOM05D004501 ORTHO05D004944 1.2e-149 535.0 941 39.0
Oeu027013.1 Olea europaea HOM05D004501 ORTHO05D004944 1.2e-149 535.0 653 46.7
Lalb_Chr09g0324311 Lupinus albus HOM05D004501 ORTHO05D004944 3.4e-149 533.5 955 39.1
Sp4g22100 Schrenkiella parvula HOM05D004501 ORTHO05D004944 9.9e-149 531.9 747 42.0
FAN08G1352 Fragaria x ananassa HOM05D004501 ORTHO05D004944 1.7e-148 531.2 977 37.9
FAN13G2915 Fragaria x ananassa HOM05D004501 ORTHO05D004944 2.9e-148 530.4 672 46.1
PGSC0003DMG400026239 Solanum tuberosum HOM05D004501 ORTHO05D004944 2.9e-148 530.4 956 37.6
Glyma.11G035800 Glycine max HOM05D004501 ORTHO05D004944 4.9e-148 529.6 941 38.5
Solyc08g078320.3 Solanum lycopersicum HOM05D004501 ORTHO05D004944 4.9e-148 529.6 668 46.1
AT2G39810 Arabidopsis thaliana HOM05D004501 ORTHO05D004944 1.1e-147 528.5 727 42.1
Sc01g0008260 Simmondsia chinensis HOM05D004501 ORTHO05D004944 1.4e-147 528.1 744 42.7
AL4G37360 Arabidopsis lyrata HOM05D004501 ORTHO05D004944 1.9e-147 527.7 731 42.0
Potri.003G079700 Populus trichocarpa HOM05D004501 ORTHO05D004944 2.4e-147 527.3 727 43.7
CDE11G0214 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 3.2e-147 526.9 660 45.0
Sopen08g026820 Solanum pennellii HOM05D004501 ORTHO05D004944 4.2e-147 526.6 953 37.8
Sed0022861 Sechium edule HOM05D004501 ORTHO05D004944 5.4e-147 526.2 805 41.9
SGA_v2.0_scaffold104G30193 Striga asiatica HOM05D004501 ORTHO05D004944 7.1e-147 525.8 706 43.5
arahy.Tifrunner.gnm1.ann1.0753T9 Arachis hypogaea HOM05D004501 ORTHO05D004944 9.3e-147 525.4 973 37.4
arahy.Tifrunner.gnm1.ann1.F6SWGC Arachis hypogaea HOM05D004501 ORTHO05D004944 9.3e-147 525.4 973 37.4
Manes.01G084200 Manihot esculenta HOM05D004501 ORTHO05D004944 1.2e-146 525.0 964 38.9
Gorai.003G175400 Gossypium raimondii HOM05D004501 ORTHO05D004944 1.6e-146 524.6 660 45.5
CAN.G1178.8 Capsicum annuum HOM05D004501 ORTHO05D004944 2.1e-146 524.2 946 37.9
Duzib205G0832 Durio zibethinus HOM05D004501 ORTHO05D004944 6.0e-146 522.7 989 37.9
BcaB02g09084 Brassica carinata HOM05D004501 ORTHO05D004944 7.8e-146 522.3 696 44.0
HanXRQChr13g0417701 Helianthus annuus HOM05D004501 ORTHO05D004944 1.0e-145 521.9 669 46.0
Phvul.002G056400 Phaseolus vulgaris HOM05D004501 ORTHO05D004944 1.0e-145 521.9 944 38.1
Ah.12g054390 Amaranthus hybridus HOM05D004501 ORTHO05D004944 1.7e-145 521.2 711 43.3
Gohir.D03G165700 Gossypium hirsutum HOM05D004501 ORTHO05D004944 1.7e-145 521.2 729 42.9
A04p30230 Brassica napus HOM05D004501 ORTHO05D004944 3.0e-145 520.4 677 44.5
Dinv21665 Davidia involucrata HOM05D004501 ORTHO05D004944 3.0e-145 520.4 609 49.4
Gohir.A03G006500 Gossypium hirsutum HOM05D004501 ORTHO05D004944 6.6e-145 519.2 663 44.8
Duzib068G0690 Durio zibethinus HOM05D004501 ORTHO05D004944 8.7e-145 518.8 973 38.7
EL10Ac5g12334 Beta vulgaris HOM05D004501 ORTHO05D004944 1.1e-144 518.5 752 42.6
CsaV3_5G004460 Cucumis sativus L. HOM05D004501 ORTHO05D004944 4.3e-144 516.5 787 41.8
VMungo1215G1578 Vigna mungo HOM05D004501 ORTHO05D004944 9.6e-144 515.4 959 37.7
AUR62007118 Chenopodium quinoa HOM05D004501 ORTHO05D004944 1.6e-143 514.6 765 41.0
Prupe.5G064600 Prunus persica HOM05D004501 ORTHO05D004944 1.6e-143 514.6 624 46.6
Lsat_1_v5_gn_6_93441 Lactuca sativa HOM05D004501 ORTHO05D004944 2.1e-143 514.2 660 46.2
C04p67630 Brassica napus HOM05D004501 ORTHO05D004944 2.8e-143 513.8 668 44.2
ECA240G3755 Erigeron canadensis HOM05D004501 ORTHO05D004944 4.8e-143 513.1 665 45.4
BraA04t18485Z Brassica rapa HOM05D004501 ORTHO05D004944 3.1e-142 510.4 963 37.2
Sed0003847 Sechium edule HOM05D004501 ORTHO05D004944 6.9e-142 509.2 662 46.1
HanXRQChr03g0088961 Helianthus annuus HOM05D004501 ORTHO05D004944 1.5e-141 508.1 653 44.4
BcaB01g03573 Brassica carinata HOM05D004501 ORTHO05D004944 1.4e-139 501.5 710 42.1
Hund14524 Selenicereus undatus HOM05D004501 ORTHO05D004944 4.2e-139 500.0 744 41.5
BolC4t28262H Brassica oleracea HOM05D004501 ORTHO05D004944 2.7e-138 497.3 959 36.3
Rhsim07G0115200 Rhododendron simsii HOM05D004501 ORTHO05D004944 2.7e-138 497.3 718 43.7
Os03g0737200 Oryza sativa ssp. japonica HOM05D004501 ORTHO05D004944 1.3e-137 495.0 992 35.6
Zm00001eb056470 Zea mays HOM05D004501 ORTHO05D004944 1.3e-137 495.0 665 42.4
ClCG01G004260 Citrullus lanatus HOM05D004501 ORTHO05D004944 1.9e-136 491.1 1035 36.0
MELO3C005513.2 Cucumis melo HOM05D004501 ORTHO05D004944 5.6e-136 489.6 968 37.2
FAN18G4013 Fragaria x ananassa HOM05D004501 ORTHO05D004944 2.0e-133 481.1 698 42.4
CDE02G3094 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 1.3e-132 478.4 741 39.5
Actinidia02160 Actinidia chinensis HOM05D004501 ORTHO05D004944 6.0e-130 469.5 712 40.2
CiPaw.12G049700 Carya illinoinensis HOM05D004501 ORTHO05D004944 1.0e-129 468.8 595 45.5
BcaC01g05462 Brassica carinata HOM05D004501 ORTHO05D004944 1.3e-129 468.4 706 40.5
TPR.G18132 Trifolium pratense HOM05D004501 ORTHO05D004944 7.4e-128 462.6 946 36.5
CBR_g20363 Chara braunii HOM05D004501 ORTHO05D004944 6.9e-126 456.1 749 39.3
AUR62019990 Chenopodium quinoa HOM05D004501 ORTHO05D004944 2.0e-125 454.5 674 40.9
Nitab4.5_0010602g0010 Nicotiana tabacum HOM05D004501 ORTHO05D004944 6.5e-124 449.5 663 41.2
GSVIVG01005813001 Vitis vinifera HOM05D004501 ORTHO05D004944 3.2e-123 447.2 586 44.9
C03p26410 Brassica napus HOM05D004501 ORTHO05D004944 4.6e-122 443.4 674 39.9
Peaxi162Scf00346g00112 Petunia axillaris HOM05D004501 ORTHO05D004944 1.9e-120 438.0 665 41.2
HPP92_002600 Vanilla planifolia HOM05D004501 ORTHO05D004944 7.4e-120 436.0 612 42.3
Rhsim13G0032200 Rhododendron simsii HOM05D004501 ORTHO05D004944 6.5e-116 422.9 602 43.7
Zm00001eb215300 Zea mays HOM05D004501 ORTHO05D004944 9.3e-115 419.1 781 36.0
Hma1.2p1_1196F.1_g265990 Hydrangea macrophylla HOM05D004501 ORTHO05D004944 1.5e-109 401.7 533 44.5
Nitab4.5_0001590g0040 Nicotiana tabacum HOM05D004501 ORTHO05D004944 8.5e-108 396.0 694 37.2
AagrBONN_evm.TU.Sc2ySwM_368.3343 Anthoceros agrestis HOM05D004501 ORTHO05D004944 4.2e-107 393.7 584 41.8
Dinv39174 Davidia involucrata HOM05D004501 ORTHO05D004944 1.3e-103 382.1 439 48.5
TAR374G0010 Trochodendron aralioides HOM05D004501 ORTHO05D004944 9.4e-99 365.9 420 49.0
BolC3t15027H Brassica oleracea HOM05D004501 ORTHO05D004944 2.1e-90 338.2 507 40.4
CSS0040587 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 1.7e-84 318.5 493 39.1
unitig_0.g1052 Utricularia gibba HOM05D004501 ORTHO05D004944 1.7e-84 318.5 702 32.9
DCAR_020178 Daucus carota HOM05D004501 ORTHO05D004944 3.1e-78 297.7 483 38.1
CSS0032615 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 1.3e-71 275.8 394 41.4
Actinidia14399 Actinidia chinensis HOM05D004501 ORTHO05D004944 5.4e-62 243.8 519 33.3
Cpa.g.sc776.4 Carica papaya HOM05D004501 ORTHO05D004944 5.6e-59 233.8 296 44.6
C04p07690 Brassica napus HOM05D004501 ORTHO05D004944 1.9e-54 218.8 412 35.9
MD06G1054400 Malus domestica HOM05D004501 ORTHO05D004944 2.8e-50 204.9 236 50.0
CSS0028018 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 1.4e-46 192.6 181 55.8
PRCOL_00000429 Prasinoderma coloniale HOM05D004501 ORTHO05D004944 3.5e-45 188.0 718 27.2
DCAR_020177 Daucus carota HOM05D004501 ORTHO05D004944 5.6e-43 180.6 221 48.9
TAR374G0951 Trochodendron aralioides HOM05D004501 ORTHO05D004944 1.6e-42 179.1 548 31.4
MD06G1054200 Malus domestica HOM05D004501 ORTHO05D004944 1.8e-41 175.6 310 38.1
CSS0011270 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 3.4e-40 171.4 185 51.4
SHI29866 Sapria himalayana HOM05D004501 ORTHO05D004944 1.1e-38 166.4 234 43.2
HanXRQChr15g0495741 Helianthus annuus HOM05D004501 ORTHO05D004944 9.0e-33 146.7 265 37.4
Cpa.g.sc776.5 Carica papaya HOM05D004501 ORTHO05D004944 2.4e-30 138.7 144 52.8
CSS0007149 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 5.6e-27 127.5 135 51.9
FAN04G2417 Fragaria x ananassa HOM05D004501 ORTHO05D004944 1.3e-26 126.3 133 53.4
BolC4t22386H Brassica oleracea HOM05D004501 ORTHO05D004944 3.6e-26 124.8 212 38.2
BolC4t22385H Brassica oleracea HOM05D004501 ORTHO05D004944 6.2e-26 124.0 223 35.4
Zm00001eb047720 Zea mays HOM05D004501 ORTHO05D004944 2.6e-24 118.6 114 52.6
Zm00001eb142020 Zea mays HOM05D004501 ORTHO05D004944 1.1e-22 113.2 176 36.9
CAN.G201.38 Capsicum annuum HOM05D004501 ORTHO05D004944 2.3e-20 105.5 205 34.1
MCO16G596 Micromonas commoda HOM05D004501 ORTHO05D004944 1.1e-17 96.7 585 25.0
GSVIVG01006616001 Vitis vinifera HOM05D004501 ORTHO05D004944 2.5e-11 75.5 68 57.4
CAN.G26.29 Capsicum annuum HOM05D004501 ORTHO05D004944 1.9e-06 59.3 158 30.4
CSS0048159 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 2.5e-06 58.9 54 50.0


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