Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c23_6430 Physcomitrium patens HOM05D001855 ORTHO05D309254 6.5e-35 150.2 78 100.0
Pp3c20_6890 Physcomitrium patens HOM05D001855 ORTHO05D002034 1.4e-13 79.3 57 71.9
Pp3c20_6180 Physcomitrium patens HOM05D001855 ORTHO05D002034 2.9e-11 71.6 53 67.9
Pp3c23_19790 Physcomitrium patens HOM05D001855 ORTHO05D002034 1.9e-10 68.9 73 56.2
Pp3c23_19930 Physcomitrium patens HOM05D001855 ORTHO05D002034 1.9e-10 68.9 73 56.2
Os10g0498900 Oryza sativa ssp. japonica HOM05D001855 ORTHO05D002034 1.2e-07 59.7 53 43.4
Mapoly0007s0134 Marchantia polymorpha HOM05D001855 ORTHO05D002034 2.0e-07 58.9 57 52.6
MSTRG.2851 Avicennia marina HOM05D001855 ORTHO05D002034 3.4e-07 58.2 53 47.2
Migut.H00396 Erythranthe guttata HOM05D001855 ORTHO05D002034 4.4e-07 57.8 53 50.9
CDE04G1679 Ceratophyllum demersum HOM05D001855 ORTHO05D002034 5.8e-07 57.4 53 45.3
Cc07_g06430 Coffea canephora HOM05D001855 ORTHO05D002034 5.8e-07 57.4 53 47.2
Sed0011523 Sechium edule HOM05D001855 ORTHO05D002034 5.8e-07 57.4 51 52.9
Actinidia12021 Actinidia chinensis HOM05D001855 ORTHO05D002034 7.5e-07 57.0 53 47.2
ClCG01G017070 Citrullus lanatus HOM05D001855 ORTHO05D002034 7.5e-07 57.0 51 51.0
vmacro05256 Vaccinium macrocarpon HOM05D001855 ORTHO05D002034 7.5e-07 57.0 53 47.2
Ah.05g167260 Amaranthus hybridus HOM05D001855 ORTHO05D002034 9.8e-07 56.6 55 45.5
MELO3C007584.2 Cucumis melo HOM05D001855 ORTHO05D002034 9.8e-07 56.6 51 49.0
CsaV3_6G043540 Cucumis sativus L. HOM05D001855 ORTHO05D002034 9.8e-07 56.6 51 49.0
Lalb_Chr05g0213441 Lupinus albus HOM05D001855 ORTHO05D002034 9.8e-07 56.6 51 51.0
MSTRG.23716 Avicennia marina HOM05D001855 ORTHO05D002034 1.3e-06 56.2 53 45.3
Cpa.g.sc6.101 Carica papaya HOM05D001855 ORTHO05D002034 1.3e-06 56.2 51 45.1
Ah.02g125170 Amaranthus hybridus HOM05D001855 ORTHO05D002034 2.2e-06 55.5 53 49.1
Cfa004059 Carpinus fangiana HOM05D001855 ORTHO05D002034 2.2e-06 55.5 51 49.0
Dinv26863 Davidia involucrata HOM05D001855 ORTHO05D002034 2.2e-06 55.5 53 45.3
Lj7C76G10 Lonicera japonica HOM05D001855 ORTHO05D002034 2.2e-06 55.5 53 43.4
MD02G1178500 Malus domestica HOM05D001855 ORTHO05D002034 2.2e-06 55.5 51 51.0
VMungo1215G0474 Vigna mungo HOM05D001855 ORTHO05D002034 2.2e-06 55.5 51 47.1
AUR62043036 Chenopodium quinoa HOM05D001855 ORTHO05D002034 2.9e-06 55.1 55 45.5
Haze_15353 Corylus avellana HOM05D001855 ORTHO05D002034 2.9e-06 55.1 51 49.0
HanXRQChr01g0030411 Helianthus annuus HOM05D001855 ORTHO05D002034 2.9e-06 55.1 54 46.3
Actinidia03811 Actinidia chinensis HOM05D001855 ORTHO05D002034 3.7e-06 54.7 53 45.3
CBR_g12380 Chara braunii HOM05D001855 ORTHO05D002034 3.7e-06 54.7 53 52.8
Eucgr.I00763 Eucalyptus grandis HOM05D001855 ORTHO05D002034 3.7e-06 54.7 51 47.1
Eucgr.I00789 Eucalyptus grandis HOM05D001855 ORTHO05D002034 3.7e-06 54.7 51 47.1
Rhsim08G0097700 Rhododendron simsii HOM05D001855 ORTHO05D002034 3.7e-06 54.7 53 45.3
Atru.chr3.254 Acer truncatum HOM05D001855 ORTHO05D002034 4.9e-06 54.3 51 45.1
Actinidia36465 Actinidia chinensis HOM05D001855 ORTHO05D002034 4.9e-06 54.3 53 45.3
Nitab4.5_0001039g0080 Nicotiana tabacum HOM05D001855 ORTHO05D002034 4.9e-06 54.3 53 43.4
Nitab4.5_0001373g0050 Nicotiana tabacum HOM05D001855 ORTHO05D002034 4.9e-06 54.3 53 43.4
Phvul.002G015300 Phaseolus vulgaris HOM05D001855 ORTHO05D002034 4.9e-06 54.3 51 43.1
RcHm_v2.0_Chr2g0106641 Rosa chinensis HOM05D001855 ORTHO05D002034 4.9e-06 54.3 51 45.1
Hund05328 Selenicereus undatus HOM05D001855 ORTHO05D002034 4.9e-06 54.3 51 47.1
EL10As7g23790 Beta vulgaris HOM05D001855 ORTHO05D002034 6.4e-06 53.9 53 45.3
CANSAT25G1046 Cannabis sativa HOM05D001855 ORTHO05D002034 6.4e-06 53.9 53 49.1
CANSAT25G1347 Cannabis sativa HOM05D001855 ORTHO05D002034 6.4e-06 53.9 53 49.1
Lj2g0017922 Lotus japonicus HOM05D001855 ORTHO05D002034 6.4e-06 53.9 51 47.1
MD15G1288400 Malus domestica HOM05D001855 ORTHO05D002034 6.4e-06 53.9 51 47.1
Oeu037162.1 Olea europaea HOM05D001855 ORTHO05D002034 6.4e-06 53.9 53 49.1
Prupe.6G229300 Prunus persica HOM05D001855 ORTHO05D002034 6.4e-06 53.9 51 47.1
Sed0001398 Sechium edule HOM05D001855 ORTHO05D002034 6.4e-06 53.9 51 52.9
CSS0014463 Camellia sinensis var. sinensis HOM05D001855 ORTHO05D002034 8.3e-06 53.5 53 45.3
AUR62003934 Chenopodium quinoa HOM05D001855 ORTHO05D002034 8.3e-06 53.5 53 45.3
AUR62038252 Chenopodium quinoa HOM05D001855 ORTHO05D002034 8.3e-06 53.5 53 45.3
Ciclev10026070m.g Citrus clementina HOM05D001855 ORTHO05D002034 8.3e-06 53.5 51 45.1
Glyma.01G190000 Glycine max HOM05D001855 ORTHO05D002034 8.3e-06 53.5 51 45.1
Lalb_Chr09g0323381 Lupinus albus HOM05D001855 ORTHO05D002034 8.3e-06 53.5 51 45.1
Hund13913 Selenicereus undatus HOM05D001855 ORTHO05D002034 8.3e-06 53.5 53 45.3
vmacro17975 Vaccinium macrocarpon HOM05D001855 ORTHO05D002034 8.3e-06 53.5 53 43.4


User provided reference genes

Program Settings