Gene: Pp3c20_6180

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c20_6180
  • Transcript Identifier Pp3c20_6180V3.1
  • Gene Type Coding gene
  • Location Chr20 : 3721624-3724072 : negative

Gene Family Information

  • ID HOM05D001855
  • #Genes/#Species 354/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c20_6180V3.1
  • pacid 32945678
  • alias Pp1s9_154V6
  • alias Phypa_52398
  • alias Phpat.020G026200
  • uniprot A0A2K1IU84

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001578
ISO
PLAZA Integrative Orthologymicrotubule bundle formation AT5G62500
GO:0009958
ISO
PLAZA Integrative Orthologypositive gravitropism AT5G62500
GO:0031110
IBA
GOA Databaseregulation of microtubule polymerization or depolymerization
GO:0009652
IBA
GOA Databasethigmotropism
GO:0051225
IBA
GOA Databasespindle assembly
GO:1904825
IBA
GOA Databaseprotein localization to microtubule plus-end
GO:0051301
IEA
GOA Databasecell division
GO:0007049
IEA
GOA Databasecell cycle

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008017
IEA
GOA Databasemicrotubule binding
GO:0008017
IEA
InterPromicrotubule binding
GO:0051010
IBA
GOA Databasemicrotubule plus-end binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035371
IBA
GOA Databasemicrotubule plus-end
GO:0009524
ISO
PLAZA Integrative Orthologyphragmoplast AT5G62500
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G67270
GO:0010005
ISO
PLAZA Integrative Orthologycortical microtubule, transverse to long axis AT5G62500
GO:0005819
ISO
PLAZA Integrative Orthologyspindle AT5G62500
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G67270
GO:0009574
ISO
PLAZA Integrative Orthologypreprophase band AT3G47690
GO:0005876
ISO
PLAZA Integrative Orthologyspindle microtubule AT3G47690
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G62500
GO:0051233
IBA
GOA Databasespindle midzone
GO:0005815
IBA
GOA Databasemicrotubule organizing center
GO:0005881
IBA
GOA Databasecytoplasmic microtubule
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005874
IEA
GOA Databasemicrotubule
GO:0005856
IEA
GOA Databasecytoskeleton

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027328 Microtubule-associated protein RP/EB
IPR036872 CH domain superfamily
IPR004953 EB1, C-terminal
IPR036133 EB1, C-terminal domain superfamily
IPR001715 Calponin homology domain
Mapman id Description
13.4.3.1 Cell cycle organisation.cytokinesis.phragmoplast microtubule organization.microtubule plus-end-tracking protein (EB1)
20.1.5.1.1 Cytoskeleton organisation.microtubular network.microtubule dynamics.microtubule (MT) plus-end-tracking.MT plus-end-tracking protein (EB1)