Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c23_18430 Physcomitrium patens HOM05D005727 ORTHO05D007324 1.2e-130 469.9 243 100.0
AagrBONN_evm.TU.Sc2ySwM_228.1047 Anthoceros agrestis HOM05D005727 ORTHO05D007324 3.5e-79 298.9 189 74.6
arahy.Tifrunner.gnm1.ann1.FBM6UZ Arachis hypogaea HOM05D005727 ORTHO05D007324 6.2e-76 288.1 238 61.8
VMungo1383G0728 Vigna mungo HOM05D005727 ORTHO05D007324 1.4e-75 287.0 234 60.3
Phvul.008G082900 Phaseolus vulgaris HOM05D005727 ORTHO05D007324 2.4e-75 286.2 230 62.2
CBR_g46434 Chara braunii HOM05D005727 ORTHO05D007324 6.9e-75 284.6 228 63.6
Lalb_Chr01g0023751 Lupinus albus HOM05D005727 ORTHO05D007324 1.2e-74 283.9 235 60.9
SalBow8G0913 Salvia bowleyana HOM05D005727 ORTHO05D007324 2.6e-74 282.7 217 65.0
CsaV3_3G033100 Cucumis sativus L. HOM05D005727 ORTHO05D007324 4.5e-74 282.0 230 62.2
PGR031G0696 Punica granatum HOM05D005727 ORTHO05D007324 7.6e-74 281.2 193 68.9
A10p33800 Brassica napus HOM05D005727 ORTHO05D007324 1.7e-73 280.0 190 67.9
Glyma.18G213900 Glycine max HOM05D005727 ORTHO05D007324 1.7e-73 280.0 238 59.7
BolC3t14633H Brassica oleracea HOM05D005727 ORTHO05D007324 2.9e-73 279.3 217 62.7
MELO3C009104.2 Cucumis melo HOM05D005727 ORTHO05D007324 2.9e-73 279.3 239 59.4
Sed0002775 Sechium edule HOM05D005727 ORTHO05D007324 2.9e-73 279.3 236 60.2
Glyma.09G275000 Glycine max HOM05D005727 ORTHO05D007324 4.9e-73 278.5 235 57.9
C09p74740 Brassica napus HOM05D005727 ORTHO05D007324 6.5e-73 278.1 191 67.0
HanXRQChr11g0345321 Helianthus annuus HOM05D005727 ORTHO05D007324 6.5e-73 278.1 228 61.0
Hund19761 Selenicereus undatus HOM05D005727 ORTHO05D007324 6.5e-73 278.1 237 58.2
arahy.Tifrunner.gnm1.ann1.CT9SCB Arachis hypogaea HOM05D005727 ORTHO05D007324 8.4e-73 277.7 248 58.9
Gohir.D09G215000 Gossypium hirsutum HOM05D005727 ORTHO05D007324 8.4e-73 277.7 237 58.6
Gorai.006G235400 Gossypium raimondii HOM05D005727 ORTHO05D007324 8.4e-73 277.7 237 58.6
Lj1g0000237 Lotus japonicus HOM05D005727 ORTHO05D007324 8.4e-73 277.7 239 59.0
Thecc.04G151700 Theobroma cacao HOM05D005727 ORTHO05D007324 8.4e-73 277.7 238 60.1
TAR267G0001 Trochodendron aralioides HOM05D005727 ORTHO05D007324 8.4e-73 277.7 186 68.8
BcaC06g31951 Brassica carinata HOM05D005727 ORTHO05D007324 1.1e-72 277.3 191 67.0
BraA10t45408Z Brassica rapa HOM05D005727 ORTHO05D007324 1.1e-72 277.3 190 66.8
DCAR_023975 Daucus carota HOM05D005727 ORTHO05D007324 1.1e-72 277.3 228 58.8
Gohir.A09G213660 Gossypium hirsutum HOM05D005727 ORTHO05D007324 1.1e-72 277.3 237 58.6
Cpa.g.sc86.59 Carica papaya HOM05D005727 ORTHO05D007324 1.9e-72 276.6 237 60.3
Sc02g0000150 Simmondsia chinensis HOM05D005727 ORTHO05D007324 3.2e-72 275.8 216 61.1
TAR636G3506 Trochodendron aralioides HOM05D005727 ORTHO05D007324 3.2e-72 275.8 186 68.3
BcaNung03303 Brassica carinata HOM05D005727 ORTHO05D007324 4.2e-72 275.4 187 67.4
BcaNung03307 Brassica carinata HOM05D005727 ORTHO05D007324 4.2e-72 275.4 194 65.5
Potri.016G136600 Populus trichocarpa HOM05D005727 ORTHO05D007324 4.2e-72 275.4 186 68.8
GSVIVG01030181001 Vitis vinifera HOM05D005727 ORTHO05D007324 4.2e-72 275.4 192 66.1
Nn2g10300 Nelumbo nucifera HOM05D005727 ORTHO05D007324 5.5e-72 275.0 187 67.9
CARHR083040 Cardamine hirsuta HOM05D005727 ORTHO05D007324 1.6e-71 273.5 239 59.8
Psat3g118920 Pisum sativum HOM05D005727 ORTHO05D007324 1.6e-71 273.5 232 58.2
Thhalv10014581m.g Eutrema salsugineum HOM05D005727 ORTHO05D007324 2.1e-71 273.1 240 58.8
CSS0006704 Camellia sinensis var. sinensis HOM05D005727 ORTHO05D007324 2.7e-71 272.7 188 67.0
Lsat_1_v5_gn_5_152381 Lactuca sativa HOM05D005727 ORTHO05D007324 3.5e-71 272.3 238 59.2
Sabra04G0153300 Salix brachista HOM05D005727 ORTHO05D007324 3.5e-71 272.3 186 66.7
QL07p032118 Quercus lobata HOM05D005727 ORTHO05D007324 4.6e-71 271.9 240 59.2
EL10Ac7g17100 Beta vulgaris HOM05D005727 ORTHO05D007324 6.1e-71 271.6 236 55.9
CANSAT35G1579 Cannabis sativa HOM05D005727 ORTHO05D007324 7.9e-71 271.2 240 58.3
Manes.08G171300 Manihot esculenta HOM05D005727 ORTHO05D007324 7.9e-71 271.2 237 59.1
Carub.0003s0787 Capsella rubella HOM05D005727 ORTHO05D007324 1.0e-70 270.8 233 59.2
Atru.chr8.117 Acer truncatum HOM05D005727 ORTHO05D007324 1.3e-70 270.4 237 58.6
CSS0016709 Camellia sinensis var. sinensis HOM05D005727 ORTHO05D007324 1.3e-70 270.4 242 57.9
Migut.J00039 Erythranthe guttata HOM05D005727 ORTHO05D007324 1.3e-70 270.4 218 61.5
Sp6g41120 Schrenkiella parvula HOM05D005727 ORTHO05D007324 1.3e-70 270.4 242 58.3
SMO358G0605 Selaginella moellendorffii HOM05D005727 ORTHO05D007324 1.3e-70 270.4 183 67.8
HPP92_018087 Vanilla planifolia HOM05D005727 ORTHO05D007324 1.3e-70 270.4 186 68.3
ATR1127G235 Amborella trichopoda HOM05D005727 ORTHO05D007324 1.8e-70 270.0 186 68.3
BolC5t34584H Brassica oleracea HOM05D005727 ORTHO05D007324 1.8e-70 270.0 184 67.9
Cc06_g00400 Coffea canephora HOM05D005727 ORTHO05D007324 1.8e-70 270.0 195 64.6
ECA248G0208 Erigeron canadensis HOM05D005727 ORTHO05D007324 1.8e-70 270.0 196 63.8
CAN.G487.5 Capsicum annuum HOM05D005727 ORTHO05D007324 2.3e-70 269.6 218 61.9
Dinv16978 Davidia involucrata HOM05D005727 ORTHO05D007324 2.3e-70 269.6 218 60.6
MD12G1188200 Malus domestica HOM05D005727 ORTHO05D007324 2.3e-70 269.6 243 58.4
Ah.15g090030 Amaranthus hybridus HOM05D005727 ORTHO05D007324 3.0e-70 269.2 216 57.9
THA.LOC104823320 Tarenaya hassleriana HOM05D005727 ORTHO05D007324 3.9e-70 268.9 217 61.3
FvH4_6g09890 Fragaria vesca HOM05D005727 ORTHO05D007324 5.1e-70 268.5 241 58.9
Oeu057982.1 Olea europaea HOM05D005727 ORTHO05D007324 8.7e-70 267.7 221 59.7
Aqoxy4G02424 Aquilegia oxysepala HOM05D005727 ORTHO05D007324 1.1e-69 267.3 239 59.0
AL3G19740 Arabidopsis lyrata HOM05D005727 ORTHO05D007324 1.1e-69 267.3 235 57.4
AT3G08740 Arabidopsis thaliana HOM05D005727 ORTHO05D007324 1.1e-69 267.3 235 56.6
Cfa017035 Carpinus fangiana HOM05D005727 ORTHO05D007324 1.1e-69 267.3 238 57.6
FAN14G2915 Fragaria x ananassa HOM05D005727 ORTHO05D007324 1.1e-69 267.3 243 59.7
Solyc10g075020.3 Solanum lycopersicum HOM05D005727 ORTHO05D007324 1.1e-69 267.3 195 65.6
Sopen10g027500 Solanum pennellii HOM05D005727 ORTHO05D007324 1.1e-69 267.3 195 65.6
Haze_21174 Corylus avellana HOM05D005727 ORTHO05D007324 1.5e-69 266.9 236 58.1
RcHm_v2.0_Chr3g0460491 Rosa chinensis HOM05D005727 ORTHO05D007324 1.9e-69 266.5 240 57.1
Sp3g07170 Schrenkiella parvula HOM05D005727 ORTHO05D007324 1.9e-69 266.5 225 60.0
FAN05G4930 Fragaria x ananassa HOM05D005727 ORTHO05D007324 2.5e-69 266.2 241 58.5
Os12g0115900 Oryza sativa ssp. japonica HOM05D005727 ORTHO05D007324 3.3e-69 265.8 221 58.8
Ciclev10012658m.g Citrus clementina HOM05D005727 ORTHO05D007324 4.3e-69 265.4 192 64.1
FAN09G3145 Fragaria x ananassa HOM05D005727 ORTHO05D007324 4.3e-69 265.4 241 58.1
Os11g0116400 Oryza sativa ssp. japonica HOM05D005727 ORTHO05D007324 4.3e-69 265.4 221 58.8
SalBow1G5580 Salvia bowleyana HOM05D005727 ORTHO05D007324 5.7e-69 265.0 197 64.5
TWI53G1599 Tripterygium wilfordii HOM05D005727 ORTHO05D007324 5.7e-69 265.0 236 56.4
Actinidia20792 Actinidia chinensis HOM05D005727 ORTHO05D007324 7.4e-69 264.6 212 60.8
PGSC0003DMG400031234 Solanum tuberosum HOM05D005727 ORTHO05D007324 7.4e-69 264.6 216 59.7
SalBow1G7101 Salvia bowleyana HOM05D005727 ORTHO05D007324 1.3e-68 263.8 245 55.5
A05p40060 Brassica napus HOM05D005727 ORTHO05D007324 1.6e-68 263.5 240 57.5
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 1.6e-68 263.5 203 61.1
BcaC05g29610 Brassica carinata HOM05D005727 ORTHO05D007324 2.2e-68 263.1 238 58.0
C05p59120 Brassica napus HOM05D005727 ORTHO05D007324 2.2e-68 263.1 238 58.0
Thhalv10023841m.g Eutrema salsugineum HOM05D005727 ORTHO05D007324 2.2e-68 263.1 184 65.8
Mapoly0080s0087 Marchantia polymorpha HOM05D005727 ORTHO05D007324 2.2e-68 263.1 238 55.9
Medtr7g073250 Medicago truncatula HOM05D005727 ORTHO05D007324 2.2e-68 263.1 231 57.6
TPR.G14131 Trifolium pratense HOM05D005727 ORTHO05D007324 2.2e-68 263.1 236 58.5
AUR62006416 Chenopodium quinoa HOM05D005727 ORTHO05D007324 2.8e-68 262.7 238 53.4
CiPaw.09G221300 Carya illinoinensis HOM05D005727 ORTHO05D007324 1.1e-67 260.8 237 57.0
FAN05G2146 Fragaria x ananassa HOM05D005727 ORTHO05D007324 1.4e-67 260.4 260 54.6
PSO017G0584 Papaver somniferum HOM05D005727 ORTHO05D007324 1.4e-67 260.4 187 63.6
Thhalv10022392m.g Eutrema salsugineum HOM05D005727 ORTHO05D007324 4.1e-67 258.8 184 64.7
Eucgr.A00739 Eucalyptus grandis HOM05D005727 ORTHO05D007324 5.3e-67 258.5 262 51.9
FAN05G2443 Fragaria x ananassa HOM05D005727 ORTHO05D007324 2.0e-66 256.5 259 54.4
PSO170G4055 Papaver somniferum HOM05D005727 ORTHO05D007324 5.9e-66 255.0 238 55.5
HanXRQChr01g0000121 Helianthus annuus HOM05D005727 ORTHO05D007324 7.7e-66 254.6 216 55.6
AUR62029764 Chenopodium quinoa HOM05D005727 ORTHO05D007324 2.2e-65 253.1 250 50.4
MSTRG.5500 Avicennia marina HOM05D005727 ORTHO05D007324 2.9e-65 252.7 217 57.1
Actinidia32567 Actinidia chinensis HOM05D005727 ORTHO05D007324 3.8e-65 252.3 195 62.6
SalBow5G2514 Salvia bowleyana HOM05D005727 ORTHO05D007324 7.2e-64 248.1 161 72.0
Peaxi162Scf01238g00221 Petunia axillaris HOM05D005727 ORTHO05D007324 1.6e-63 246.9 212 56.6
Aa31LG5G18760 Aethionema arabicum HOM05D005727 ORTHO05D007324 4.6e-63 245.4 235 55.3
BcaC01g05776 Brassica carinata HOM05D005727 ORTHO05D007324 5.1e-62 241.9 185 63.2
Lj3A941T101 Lonicera japonica HOM05D005727 ORTHO05D007324 1.5e-61 240.4 202 57.9
Nitab4.5_0010794g0010 Nicotiana tabacum HOM05D005727 ORTHO05D007324 8.2e-60 234.6 236 53.4
COL.COLO4_06480 Corchorus olitorius HOM05D005727 ORTHO05D007324 2.4e-59 233.0 171 64.9
Prupe.6G293500 Prunus persica HOM05D005727 ORTHO05D007324 2.0e-58 229.9 242 52.5
Duzib268G0979 Durio zibethinus HOM05D005727 ORTHO05D007324 7.7e-58 228.0 151 68.2
SGA_v2.0_scaffold85G26621 Striga asiatica HOM05D005727 ORTHO05D007324 1.0e-57 227.6 166 62.7
MCO07G614 Micromonas commoda HOM05D005727 ORTHO05D007324 2.9e-57 226.1 184 58.2
Aa31LG5G11490 Aethionema arabicum HOM05D005727 ORTHO05D007324 2.7e-55 219.5 198 54.5
vmacro08938 Vaccinium macrocarpon HOM05D005727 ORTHO05D007324 1.8e-54 216.9 289 43.9
unitig_578.g15912 Utricularia gibba HOM05D005727 ORTHO05D007324 2.3e-54 216.5 157 62.4
Cre16.g691000 Chlamydomonas reinhardtii HOM05D005727 ORTHO05D007324 3.3e-53 212.6 184 54.3
Rhsim04G0121700 Rhododendron simsii HOM05D005727 ORTHO05D007324 8.0e-47 191.4 345 35.4
MD04G1174600 Malus domestica HOM05D005727 ORTHO05D007324 3.9e-46 189.1 131 62.6
SEGI_30349 Sequoiadendron giganteum HOM05D005727 ORTHO05D007324 9.4e-40 167.9 126 62.7
ClCG10G022720 Citrullus lanatus HOM05D005727 ORTHO05D007324 2.2e-33 146.7 102 65.7
Sopen10g027490 Solanum pennellii HOM05D005727 ORTHO05D007324 2.2e-33 146.7 102 65.7
CDE04G3002 Ceratophyllum demersum HOM05D005727 ORTHO05D007324 1.8e-30 137.1 88 70.5
PRCOL_00007056 Prasinoderma coloniale HOM05D005727 ORTHO05D007324 4.1e-27 125.9 169 41.4
Zm00001eb406060 Zea mays HOM05D005727 ORTHO05D007324 2.6e-21 106.7 89 60.7
Aqoxy1G00469 Aquilegia oxysepala HOM05D002514 ORTHO05D002761 6.6e-17 92.0 180 26.7
Eucgr.J01769 Eucalyptus grandis HOM05D007418 ORTHO05D009419 6.6e-17 92.0 182 31.9
SMO172G0180 Selaginella moellendorffii HOM05D007418 ORTHO05D009419 1.9e-16 90.5 183 25.1
ECA248G1985 Erigeron canadensis HOM05D007418 ORTHO05D009419 2.1e-15 87.0 238 27.3
AagrBONN_evm.TU.Sc2ySwM_344.2531 Anthoceros agrestis HOM05D007418 ORTHO05D009419 2.8e-15 86.7 158 27.2
Aa31LG11G8030 Aethionema arabicum HOM05D007418 ORTHO05D009419 3.6e-15 86.3 177 26.6
CBR_g28818 Chara braunii HOM05D007418 ORTHO05D009419 8.0e-15 85.1 238 26.1
MCO01G577 Micromonas commoda HOM05D005727 ORTHO05D009419 8.0e-15 85.1 185 25.4
PGR119G2313 Punica granatum HOM05D007418 ORTHO05D009419 1.8e-14 84.0 237 27.8
THA.LOC104817736 Tarenaya hassleriana HOM05D007418 ORTHO05D009419 2.3e-14 83.6 178 25.8
CDE04G0740 Ceratophyllum demersum HOM05D005727 ORTHO05D007324 4.0e-14 82.8 61 65.6
FvH4_3g45540 Fragaria vesca HOM05D007418 ORTHO05D009419 1.5e-13 80.9 243 26.3
FAN25G3222 Fragaria x ananassa HOM05D007418 ORTHO05D009419 1.5e-13 80.9 164 28.7
QL01p009000 Quercus lobata HOM05D007418 ORTHO05D009419 3.4e-13 79.7 166 31.3
TWI60G0114 Tripterygium wilfordii HOM05D007418 ORTHO05D009419 4.4e-13 79.3 241 25.7
FAN11G0209 Fragaria x ananassa HOM05D007418 ORTHO05D009419 1.3e-12 77.8 243 25.9
CAN.G782.23 Capsicum annuum HOM05D007418 ORTHO05D009419 2.9e-12 76.6 182 24.7
Manes.05G202800 Manihot esculenta HOM05D007418 ORTHO05D009419 4.9e-12 75.9 249 24.5
FAN21G2280 Fragaria x ananassa HOM05D007418 ORTHO05D009419 8.3e-12 75.1 243 25.1
SEGI_29867 Sequoiadendron giganteum HOM05D005727 ORTHO05D007324 8.3e-12 75.1 54 66.7
Duzib160G0534 Durio zibethinus HOM05D007418 ORTHO05D009419 2.4e-11 73.6 177 23.7


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