Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c23_10930 Physcomitrium patens HOM05D007197 ORTHO05D009064 1.0e-137 493.4 250 100.0
Mapoly0014s0028 Marchantia polymorpha HOM05D007197 ORTHO05D009064 9.6e-56 221.1 219 54.3
AagrBONN_evm.TU.Sc2ySwM_228.390 Anthoceros agrestis HOM05D007197 ORTHO05D009064 9.0e-54 214.5 223 50.7
ATR0033G040 Amborella trichopoda HOM05D007197 ORTHO05D009064 3.0e-49 199.5 221 49.8
MBI14_g30584_MAGBIO Magnolia biondii HOM05D007197 ORTHO05D009064 3.9e-49 199.1 221 49.8
GSVIVG01025047001 Vitis vinifera HOM05D007197 ORTHO05D009064 6.7e-49 198.4 220 50.9
Glyma.11G143900 Glycine max HOM05D007197 ORTHO05D009064 9.7e-48 194.5 222 48.2
TWI79G0955 Tripterygium wilfordii HOM05D007197 ORTHO05D009064 9.7e-48 194.5 220 50.5
Atru.chr7.1106 Acer truncatum HOM05D007197 ORTHO05D009064 1.3e-47 194.1 219 48.4
Aqoxy4G03051 Aquilegia oxysepala HOM05D007197 ORTHO05D009064 2.8e-47 193.0 218 50.5
Sed0002926 Sechium edule HOM05D007197 ORTHO05D009064 3.7e-47 192.6 219 51.1
Lalb_Chr19g0137651 Lupinus albus HOM05D007197 ORTHO05D009064 6.3e-47 191.8 218 49.1
QL01p033595 Quercus lobata HOM05D007197 ORTHO05D009064 8.2e-47 191.4 225 48.9
Hma1.2p1_0846F.1_g227730 Hydrangea macrophylla HOM05D007197 ORTHO05D009064 1.1e-46 191.0 217 49.8
arahy.Tifrunner.gnm1.ann1.EBM8RS Arachis hypogaea HOM05D007197 ORTHO05D009064 1.8e-46 190.3 220 48.6
MD11G1115100 Malus domestica HOM05D007197 ORTHO05D009064 3.1e-46 189.5 220 50.5
arahy.Tifrunner.gnm1.ann1.RPJA1V Arachis hypogaea HOM05D007197 ORTHO05D009064 5.3e-46 188.7 220 48.2
Phvul.011G067900 Phaseolus vulgaris HOM05D007197 ORTHO05D009064 6.9e-46 188.3 219 48.9
BcaB03g13374 Brassica carinata HOM05D007197 ORTHO05D009064 1.2e-45 187.6 220 50.0
Lj3g0013433 Lotus japonicus HOM05D007197 ORTHO05D009064 1.2e-45 187.6 219 48.9
PSO206G0023 Papaver somniferum HOM05D007197 ORTHO05D009064 2.0e-45 186.8 220 49.5
A08p35470 Brassica napus HOM05D007197 ORTHO05D009064 5.9e-45 185.3 220 49.5
BraA08t35453Z Brassica rapa HOM05D007197 ORTHO05D009064 5.9e-45 185.3 220 49.5
Dinv32855 Davidia involucrata HOM05D007197 ORTHO05D009064 7.7e-45 184.9 219 47.9
Sp1g06430 Schrenkiella parvula HOM05D007197 ORTHO05D009064 7.7e-45 184.9 220 50.0
Carub.0001s0710 Capsella rubella HOM05D007197 ORTHO05D009064 1.0e-44 184.5 225 48.9
TAR636G0394 Trochodendron aralioides HOM05D007197 ORTHO05D009064 2.2e-44 183.3 216 49.1
Cfa011437 Carpinus fangiana HOM05D007197 ORTHO05D009064 2.9e-44 183.0 221 49.8
COL.COLO4_15236 Corchorus olitorius HOM05D007197 ORTHO05D009064 2.9e-44 183.0 233 46.8
C08p03340 Brassica napus HOM05D007197 ORTHO05D009064 3.8e-44 182.6 221 48.9
MELO3C013672.2 Cucumis melo HOM05D007197 ORTHO05D009064 3.8e-44 182.6 220 49.1
Eucgr.J02088 Eucalyptus grandis HOM05D007197 ORTHO05D009064 5.0e-44 182.2 220 49.1
AT1G07745 Arabidopsis thaliana HOM05D007197 ORTHO05D009064 6.5e-44 181.8 220 48.2
Actinidia03776 Actinidia chinensis HOM05D007197 ORTHO05D009064 8.5e-44 181.4 219 50.2
EL10Ac7g15954 Beta vulgaris HOM05D007197 ORTHO05D009064 8.5e-44 181.4 239 46.4
Nn2g10506 Nelumbo nucifera HOM05D007197 ORTHO05D009064 8.5e-44 181.4 220 48.6
Thecc.09G328900 Theobroma cacao HOM05D007197 ORTHO05D009064 1.1e-43 181.0 219 48.4
Prupe.6G086100 Prunus persica HOM05D007197 ORTHO05D009064 1.4e-43 180.6 224 48.2
AL1G17970 Arabidopsis lyrata HOM05D007197 ORTHO05D009064 1.9e-43 180.3 220 48.6
Manes.11G135500 Manihot esculenta HOM05D007197 ORTHO05D009064 2.5e-43 179.9 219 48.4
VMungo1127G0131 Vigna mungo HOM05D007197 ORTHO05D009064 2.5e-43 179.9 219 48.4
ECA248G2344 Erigeron canadensis HOM05D007197 ORTHO05D009064 3.2e-43 179.5 218 48.2
AUR62041290 Chenopodium quinoa HOM05D007197 ORTHO05D009064 5.5e-43 178.7 219 48.4
CsaV3_6G022120 Cucumis sativus L. HOM05D007197 ORTHO05D009064 5.5e-43 178.7 236 45.3
BolC8t47130H Brassica oleracea HOM05D007197 ORTHO05D009064 1.2e-42 177.6 220 48.2
DCAR_018914 Daucus carota HOM05D007197 ORTHO05D009064 1.2e-42 177.6 215 46.0
Medtr4g062540 Medicago truncatula HOM05D007197 ORTHO05D009064 1.2e-42 177.6 221 45.7
AUR62034127 Chenopodium quinoa HOM05D007197 ORTHO05D009064 1.6e-42 177.2 219 48.9
THA.LOC104800640 Tarenaya hassleriana HOM05D007197 ORTHO05D009064 2.1e-42 176.8 222 48.6
ClCG02G020670 Citrullus lanatus HOM05D007197 ORTHO05D009064 4.6e-42 175.6 260 41.9
Cc01_g12210 Coffea canephora HOM05D007197 ORTHO05D009064 7.9e-42 174.9 219 45.2
CiPaw.13G100300 Carya illinoinensis HOM05D007197 ORTHO05D009064 1.0e-41 174.5 220 47.7
TPR.G1052 Trifolium pratense HOM05D007197 ORTHO05D009064 1.0e-41 174.5 222 44.6
Sc12g0001730 Simmondsia chinensis HOM05D007197 ORTHO05D009064 1.4e-41 174.1 212 47.2
Zm00001eb329200 Zea mays HOM05D007197 ORTHO05D009064 1.8e-41 173.7 217 43.3
Oeu017383.1 Olea europaea HOM05D007197 ORTHO05D009064 2.3e-41 173.3 216 46.3
HanXRQChr11g0340311 Helianthus annuus HOM05D007197 ORTHO05D009064 5.1e-41 172.2 218 46.3
Sopen11g030850 Solanum pennellii HOM05D007197 ORTHO05D009064 6.7e-41 171.8 222 43.7
Gohir.A05G098300 Gossypium hirsutum HOM05D007197 ORTHO05D009064 1.1e-40 171.0 219 47.0
Solyc11g073220.3 Solanum lycopersicum HOM05D007197 ORTHO05D009064 2.0e-40 170.2 222 44.1
FAN21G2562 Fragaria x ananassa HOM05D007197 ORTHO05D009064 2.6e-40 169.9 239 44.4
Lsat_1_v5_gn_5_166580 Lactuca sativa HOM05D001223 ORTHO05D001058 3.3e-40 169.5 219 46.6
Os09g0104200 Oryza sativa ssp. japonica HOM05D007197 ORTHO05D009064 3.3e-40 169.5 217 45.2
FAN11G2804 Fragaria x ananassa HOM05D007197 ORTHO05D009064 4.4e-40 169.1 221 47.1
RcHm_v2.0_Chr5g0062661 Rosa chinensis HOM05D007197 ORTHO05D009064 4.4e-40 169.1 219 46.6
Rhsim01G0224100 Rhododendron simsii HOM05D007197 ORTHO05D009064 5.7e-40 168.7 224 46.9
Duzib168G0795 Durio zibethinus HOM05D007197 ORTHO05D009064 7.4e-40 168.3 219 45.7
Migut.N02658 Erythranthe guttata HOM05D007197 ORTHO05D009064 7.4e-40 168.3 230 41.7
SMO358G0138 Selaginella moellendorffii HOM05D007197 ORTHO05D009064 9.7e-40 167.9 246 41.5
CAN.G764.13 Capsicum annuum HOM05D007197 ORTHO05D009064 2.8e-39 166.4 223 43.5
Nitab4.5_0000610g0220 Nicotiana tabacum HOM05D007197 ORTHO05D009064 2.4e-38 163.3 223 42.2
Haze_24013 Corylus avellana HOM05D007197 ORTHO05D009064 3.1e-38 162.9 259 42.9
Haze_24019 Corylus avellana HOM05D007197 ORTHO05D009064 3.1e-38 162.9 259 42.9
Gorai.009G102000 Gossypium raimondii HOM05D007197 ORTHO05D009064 3.1e-38 162.9 229 45.0
Thhalv10008243m.g Eutrema salsugineum HOM05D007197 ORTHO05D009064 7.7e-37 158.3 214 46.3
SHI05980 Sapria himalayana HOM05D000723 ORTHO05D001626 1.3e-36 157.5 221 43.4
Ca_19199_v3 Cicer arietinum L. HOM05D007197 ORTHO05D009064 3.8e-36 156.0 194 46.4
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 8.5e-36 154.8 239 38.9
CSS0011816 Camellia sinensis var. sinensis HOM05D007197 ORTHO05D009064 1.9e-35 153.7 225 43.1
Nitab4.5_0003179g0070 Nicotiana tabacum HOM05D007197 ORTHO05D009064 1.6e-34 150.6 253 37.2
SMO142G0018 Selaginella moellendorffii HOM05D007197 ORTHO05D009064 2.7e-34 149.8 218 42.7
Prupe.6G066800 Prunus persica HOM05D007197 ORTHO05D009064 4.4e-32 142.5 185 48.1
Peaxi162Scf00406g00019 Petunia axillaris HOM05D007197 ORTHO05D009064 1.4e-30 137.5 218 40.8
SGA_v2.0_scaffold257G45723 Striga asiatica HOM05D007197 ORTHO05D009064 1.5e-27 127.5 170 46.5
PSO339G6612 Papaver somniferum HOM05D007197 ORTHO05D009064 1.2e-26 124.4 169 46.7
Nn2g16043 Nelumbo nucifera HOM05D007197 ORTHO05D009064 8.8e-25 118.2 163 46.6
vmacro14499 Vaccinium macrocarpon HOM05D007197 ORTHO05D009064 1.5e-24 117.5 152 45.4
Hund18943 Selenicereus undatus HOM05D007197 ORTHO05D009064 3.3e-24 116.3 166 47.6
HPP92_017953 Vanilla planifolia HOM05D007197 ORTHO05D009064 2.2e-23 113.6 127 45.7
Nn2g16045 Nelumbo nucifera HOM05D007197 ORTHO05D009064 1.2e-21 107.8 147 46.3
Ah.08g214900 Amaranthus hybridus HOM05D007197 ORTHO05D009064 7.7e-21 105.1 97 57.7
Hma1.2p1_0846F.1_g227720 Hydrangea macrophylla HOM05D007197 ORTHO05D009064 5.0e-20 102.4 145 44.1
MCO16G347 Micromonas commoda HOM05D007197 ORTHO05D009064 5.5e-19 99.0 234 35.0
COL.COLO4_29025 Corchorus olitorius HOM05D007197 ORTHO05D009064 9.4e-19 98.2 73 61.6
PRCOL_00004125 Prasinoderma coloniale HOM05D007197 ORTHO05D009064 1.2e-18 97.8 249 32.5
CARHR007550 Cardamine hirsuta HOM05D007197 ORTHO05D009064 3.0e-17 93.2 142 43.7
FvH4_3g34810 Fragaria vesca HOM05D007197 ORTHO05D009064 1.5e-16 90.9 142 43.0
HPP92_018064 Vanilla planifolia HOM05D007197 ORTHO05D009064 2.0e-16 90.5 178 36.5
Gohir.D05G098400 Gossypium hirsutum HOM05D007197 ORTHO05D009064 1.7e-15 87.4 150 41.3
Cre03.g184651 Chlamydomonas reinhardtii HOM05D007197 ORTHO05D009064 2.2e-15 87.0 233 30.9
SEGI_26959 Sequoiadendron giganteum HOM05D007197 ORTHO05D009064 6.3e-15 85.5 73 60.3
Hma1.2p1_0056F.1_g031656 Hydrangea macrophylla HOM05D007197 ORTHO05D009064 1.3e-12 77.8 145 37.9
unitig_0.g1024 Utricularia gibba HOM05D007197 ORTHO05D009064 2.1e-10 70.5 218 27.1
Psat7g220240 Pisum sativum HOM05D007197 ORTHO05D009064 8.8e-09 65.1 63 54.0
Cpa.g.sc252.16 Carica papaya HOM05D007197 ORTHO05D009064 2.6e-08 63.5 70 51.4
Hma1.2p1_3525F.1_g336560 Hydrangea macrophylla HOM05D007197 ORTHO05D009064 4.4e-08 62.8 43 58.1
PRCOL_00002213 Prasinoderma coloniale HOM05D001363 ORTHO05D006255 5.7e-08 62.4 262 26.7
HPP92_010750 Vanilla planifolia HOM05D001363 ORTHO05D006255 1.7e-07 60.8 231 28.1
AagrBONN_evm.TU.Sc2ySwM_228.594 Anthoceros agrestis HOM05D001546 ORTHO05D008648 6.3e-07 58.9 212 27.4
Pp3c5_12400 Physcomitrium patens HOM05D001546 ORTHO05D008648 6.3e-07 58.9 210 27.6
Zm00001eb243950 Zea mays HOM05D001363 ORTHO05D006255 1.8e-06 57.4 223 26.5
Cre02.g102500 Chlamydomonas reinhardtii HOM05D001363 ORTHO05D008648 2.4e-06 57.0 239 28.9
Os02g0562100 Oryza sativa ssp. japonica HOM05D001363 ORTHO05D006255 2.4e-06 57.0 231 28.6


User provided reference genes

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