Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c21_14830 Physcomitrium patens HOM05D004427 ORTHO05D005381 1.9e-133 479.2 241 100.0
AagrBONN_evm.TU.Sc2ySwM_344.2535 Anthoceros agrestis HOM05D004427 ORTHO05D005381 2.7e-55 219.5 226 49.6
Mapoly0009s0037 Marchantia polymorpha HOM05D004427 ORTHO05D005381 6.0e-55 218.4 233 49.8
SEGI_39191 Sequoiadendron giganteum HOM05D004427 ORTHO05D005381 1.1e-40 171.0 230 43.5
Nn2g10653 Nelumbo nucifera HOM05D004427 ORTHO05D005381 1.6e-39 167.2 232 39.7
VMungo1127G1062 Vigna mungo HOM05D004427 ORTHO05D005381 1.6e-39 167.2 231 39.0
FvH4_3g33710 Fragaria vesca HOM05D004427 ORTHO05D005381 3.6e-39 166.0 238 37.8
FAN16G3079 Fragaria x ananassa HOM05D004427 ORTHO05D005381 3.6e-39 166.0 237 38.8
FAN25G0902 Fragaria x ananassa HOM05D004427 ORTHO05D005381 3.6e-39 166.0 245 38.0
COL.COLO4_25263 Corchorus olitorius HOM05D004427 ORTHO05D005381 4.6e-39 165.6 231 39.0
AUR62037165 Chenopodium quinoa HOM05D004427 ORTHO05D005381 6.1e-39 165.2 233 38.2
FAN21G1733 Fragaria x ananassa HOM05D004427 ORTHO05D005381 6.1e-39 165.2 238 37.8
Duzib150G0661 Durio zibethinus HOM05D004427 ORTHO05D005381 1.3e-38 164.1 231 38.1
Dinv10838 Davidia involucrata HOM05D004427 ORTHO05D005381 1.8e-38 163.7 225 39.1
RcHm_v2.0_Chr5g0061241 Rosa chinensis HOM05D004427 ORTHO05D005381 2.3e-38 163.3 231 38.1
Gohir.A05G075200 Gossypium hirsutum HOM05D004427 ORTHO05D005381 3.0e-38 162.9 235 38.7
Phvul.011G071700 Phaseolus vulgaris HOM05D004427 ORTHO05D005381 3.0e-38 162.9 225 39.6
TWI75G0497 Tripterygium wilfordii HOM05D004427 ORTHO05D005381 3.0e-38 162.9 244 36.9
Duzib168G1361 Durio zibethinus HOM05D004427 ORTHO05D005381 3.9e-38 162.5 231 37.7
FAN11G1819 Fragaria x ananassa HOM05D004427 ORTHO05D005381 3.9e-38 162.5 238 37.8
Gohir.D05G078000 Gossypium hirsutum HOM05D004427 ORTHO05D005381 8.7e-38 161.4 235 38.3
Gorai.009G079500 Gossypium raimondii HOM05D004427 ORTHO05D005381 8.7e-38 161.4 235 38.3
Oeu062268.1 Olea europaea HOM05D004427 ORTHO05D005381 1.1e-37 161.0 229 39.7
AUR62025117 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.9e-37 160.2 237 38.0
Ciclev10029217m.g Citrus clementina HOM05D004427 ORTHO05D005381 1.9e-37 160.2 234 37.6
ATR0069G023 Amborella trichopoda HOM05D004427 ORTHO05D005381 2.5e-37 159.8 228 39.5
CANSAT54G0683 Cannabis sativa HOM05D004427 ORTHO05D005381 2.5e-37 159.8 233 36.5
Eucgr.J00959 Eucalyptus grandis HOM05D004427 ORTHO05D005381 2.5e-37 159.8 237 39.7
Glyma.12G072600 Glycine max HOM05D004427 ORTHO05D005381 3.3e-37 159.5 231 36.8
Sabra13G0002300 Salix brachista HOM05D004427 ORTHO05D005381 3.3e-37 159.5 242 37.6
MSTRG.21151 Avicennia marina HOM05D004427 ORTHO05D005381 4.3e-37 159.1 223 39.5
Thecc.09G261900 Theobroma cacao HOM05D004427 ORTHO05D005381 4.3e-37 159.1 232 37.9
CiPaw.14G077000 Carya illinoinensis HOM05D004427 ORTHO05D005381 5.7e-37 158.7 229 38.0
Psat7g222000 Pisum sativum HOM05D004427 ORTHO05D005381 5.7e-37 158.7 244 38.1
TPR.G2989 Trifolium pratense HOM05D004427 ORTHO05D005381 5.7e-37 158.7 239 35.1
Aqoxy4G03193 Aquilegia oxysepala HOM05D004427 ORTHO05D005381 7.4e-37 158.3 228 39.0
Lalb_Chr19g0137481 Lupinus albus HOM05D004427 ORTHO05D005381 7.4e-37 158.3 244 36.1
ClCG02G020830 Citrullus lanatus HOM05D004427 ORTHO05D005381 1.3e-36 157.5 232 36.2
Hma1.2p1_2156F.1_g315430 Hydrangea macrophylla HOM05D004427 ORTHO05D005381 2.2e-36 156.8 228 35.5
EL10Ac9g22377 Beta vulgaris HOM05D004427 ORTHO05D005381 2.8e-36 156.4 231 36.4
GSVIVG01025117001 Vitis vinifera HOM05D004427 ORTHO05D005381 2.8e-36 156.4 230 39.1
Sed0015128 Sechium edule HOM05D004427 ORTHO05D005381 3.7e-36 156.0 233 36.5
arahy.Tifrunner.gnm1.ann1.T6X9B2 Arachis hypogaea HOM05D004427 ORTHO05D005381 4.8e-36 155.6 232 37.1
ECA233G4215 Erigeron canadensis HOM05D004427 ORTHO05D005381 4.8e-36 155.6 229 37.6
Lj3g0007721 Lotus japonicus HOM05D004427 ORTHO05D005381 4.8e-36 155.6 235 36.6
arahy.Tifrunner.gnm1.ann1.JL7YN4 Arachis hypogaea HOM05D004427 ORTHO05D005381 6.3e-36 155.2 232 37.1
Ca_19237_v3 Cicer arietinum L. HOM05D004427 ORTHO05D005381 6.3e-36 155.2 240 35.4
PSO210G5092 Papaver somniferum HOM05D004427 ORTHO05D005381 6.3e-36 155.2 226 38.5
QL01p036593 Quercus lobata HOM05D004427 ORTHO05D005381 6.3e-36 155.2 225 38.7
PGSC0003DMG400013475 Solanum tuberosum HOM05D004427 ORTHO05D005381 6.3e-36 155.2 227 40.5
CSS0010329 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 8.2e-36 154.8 224 38.8
Ah.02g113850 Amaranthus hybridus HOM05D004427 ORTHO05D005381 1.1e-35 154.5 224 38.4
HanXRQChr02g0051371 Helianthus annuus HOM05D004427 ORTHO05D005381 1.1e-35 154.5 231 36.4
TAR623G1453 Trochodendron aralioides HOM05D004427 ORTHO05D005381 1.8e-35 153.7 229 39.3
CsaV3_6G021480 Cucumis sativus L. HOM05D004427 ORTHO05D005381 3.1e-35 152.9 232 35.3
Potri.013G002700 Populus trichocarpa HOM05D004427 ORTHO05D005381 3.1e-35 152.9 242 36.4
Medtr4g061080 Medicago truncatula HOM05D004427 ORTHO05D005381 4.1e-35 152.5 241 34.9
Migut.N02630 Erythranthe guttata HOM05D004427 ORTHO05D005381 6.9e-35 151.8 238 35.3
MD11G1123000 Malus domestica HOM05D004427 ORTHO05D005381 6.9e-35 151.8 227 35.2
Rhsim01G0221200 Rhododendron simsii HOM05D004427 ORTHO05D005381 6.9e-35 151.8 222 37.4
Cfa011378 Carpinus fangiana HOM05D004427 ORTHO05D005381 9.0e-35 151.4 228 37.7
Haze_23944 Corylus avellana HOM05D004427 ORTHO05D005381 1.2e-34 151.0 228 37.3
MELO3C025732.2 Cucumis melo HOM05D004427 ORTHO05D005381 1.2e-34 151.0 232 36.2
Thhalv10014584m.g Eutrema salsugineum HOM05D004427 ORTHO05D005381 1.2e-34 151.0 230 36.5
vmacro14479 Vaccinium macrocarpon HOM05D004427 ORTHO05D005381 1.2e-34 151.0 228 36.4
Carub.0008s2094 Capsella rubella HOM05D004427 ORTHO05D005381 2.0e-34 150.2 237 35.9
Manes.04G026600 Manihot esculenta HOM05D004427 ORTHO05D005381 2.0e-34 150.2 233 37.3
PGR119G1466 Punica granatum HOM05D004427 ORTHO05D005381 2.0e-34 150.2 228 36.0
BcaB01g04643 Brassica carinata HOM05D004427 ORTHO05D005381 2.6e-34 149.8 236 36.9
Lj1C183T3 Lonicera japonica HOM05D004427 ORTHO05D005381 2.6e-34 149.8 229 38.0
QL03p001209 Quercus lobata HOM05D004427 ORTHO05D005381 3.4e-34 149.4 255 32.9
Sp6g21820 Schrenkiella parvula HOM05D004427 ORTHO05D005381 3.4e-34 149.4 236 35.6
Nitab4.5_0000100g0070 Nicotiana tabacum HOM05D004427 ORTHO05D005381 5.9e-34 148.7 186 41.4
unitig_0.g1522 Utricularia gibba HOM05D004427 ORTHO05D005381 5.9e-34 148.7 232 37.1
A03p11310 Brassica napus HOM05D004427 ORTHO05D005381 7.7e-34 148.3 236 35.6
MD09G1211300 Malus domestica HOM05D004427 ORTHO05D005381 1.0e-33 147.9 227 34.4
Nitab4.5_0000607g0030 Nicotiana tabacum HOM05D004427 ORTHO05D005381 1.0e-33 147.9 186 41.4
Sopen05g001320 Solanum pennellii HOM05D004427 ORTHO05D005381 1.0e-33 147.9 227 39.6
THA.LOC104799482 Tarenaya hassleriana HOM05D004427 ORTHO05D005381 1.0e-33 147.9 242 34.3
AL8G36800 Arabidopsis lyrata HOM05D004427 ORTHO05D005381 2.2e-33 146.7 239 34.3
BraA03t10444Z Brassica rapa HOM05D004427 ORTHO05D005381 2.9e-33 146.4 237 35.0
Aa31LG1G12350 Aethionema arabicum HOM05D004427 ORTHO05D005381 5.0e-33 145.6 235 34.9
Lj1C183T1 Lonicera japonica HOM05D004427 ORTHO05D005381 5.0e-33 145.6 229 37.6
AL817U10010 Arabidopsis lyrata HOM05D004427 ORTHO05D005381 6.5e-33 145.2 239 33.9
CSS0008575 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 6.5e-33 145.2 189 40.7
CSS0013146 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 8.5e-33 144.8 232 36.2
AT5G60190 Arabidopsis thaliana HOM05D004427 ORTHO05D005381 1.1e-32 144.4 239 33.5
Cc01_g11690 Coffea canephora HOM05D004427 ORTHO05D005381 1.1e-32 144.4 233 35.2
Lsat_1_v5_gn_6_24041 Lactuca sativa HOM05D004427 ORTHO05D005381 1.9e-32 143.7 232 35.3
BcaB08g36313 Brassica carinata HOM05D004427 ORTHO05D005381 2.5e-32 143.3 190 40.5
CARHR273870 Cardamine hirsuta HOM05D004427 ORTHO05D005381 5.5e-32 142.1 240 34.6
Prupe.6G092400 Prunus persica HOM05D004427 ORTHO05D005381 5.5e-32 142.1 234 36.3
BolC3t13765H Brassica oleracea HOM05D004427 ORTHO05D005381 7.2e-32 141.7 237 35.0
CAN.G765.37 Capsicum annuum HOM05D004427 ORTHO05D005381 7.2e-32 141.7 226 35.4
C03p13030 Brassica napus HOM05D004427 ORTHO05D005381 2.1e-31 140.2 231 35.5
SHI06027 Sapria himalayana HOM05D004427 ORTHO05D005381 2.7e-31 139.8 229 34.5
A10p17340 Brassica napus HOM05D004427 ORTHO05D005381 1.0e-30 137.9 236 36.4
Peaxi162Scf00155g00071 Petunia axillaris HOM05D004427 ORTHO05D005381 1.4e-30 137.5 187 39.0
BraA10t43818Z Brassica rapa HOM05D004427 ORTHO05D005381 1.8e-30 137.1 239 36.0
CSS0042497 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 1.8e-30 137.1 226 33.6
PSO210G2821 Papaver somniferum HOM05D004427 ORTHO05D005381 3.0e-30 136.3 239 35.6
CAN.G354.26 Capsicum annuum HOM05D004427 ORTHO05D005381 8.8e-30 134.8 226 34.5
Zm00001eb413910 Zea mays HOM05D004427 ORTHO05D005381 2.6e-29 133.3 236 37.7
SGA_v2.0_scaffold80G25743 Striga asiatica HOM05D004427 ORTHO05D005381 3.3e-29 132.9 229 34.1
Hund22380 Selenicereus undatus HOM05D004427 ORTHO05D005381 4.4e-29 132.5 213 34.7
Cre01.g055050 Chlamydomonas reinhardtii HOM05D004427 ORTHO05D005381 5.7e-29 132.1 207 35.3
DCAR_002673 Daucus carota HOM05D004427 ORTHO05D005381 2.2e-28 130.2 261 30.3
Ah.02g123640 Amaranthus hybridus HOM05D004427 ORTHO05D005381 3.7e-28 129.4 235 32.8
AUR62003115 Chenopodium quinoa HOM05D004427 ORTHO05D005381 3.7e-28 129.4 199 38.7
FvH4_4g37251 Fragaria vesca HOM05D004427 ORTHO05D005381 1.8e-27 127.1 161 44.1
EL10Ac9g22643 Beta vulgaris HOM05D004427 ORTHO05D005381 2.4e-27 126.7 265 29.1
EL10Ac5g12984 Beta vulgaris HOM05D004427 ORTHO05D005381 4.1e-27 125.9 248 30.2
RcHm_v2.0_Chr4g0447061 Rosa chinensis HOM05D004427 ORTHO05D005381 6.9e-27 125.2 152 43.4
Os11g0102700 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 9.1e-27 124.8 231 35.5
Os12g0102350 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 1.5e-26 124.0 231 35.5
Ah.03g139880 Amaranthus hybridus HOM05D004427 ORTHO05D005381 2.0e-26 123.6 270 29.3
QL01p000714 Quercus lobata HOM05D004427 ORTHO05D005381 7.7e-26 121.7 225 34.7
Sc06g0007950 Simmondsia chinensis HOM05D004427 ORTHO05D005381 7.7e-26 121.7 140 42.1
EL10Ac8g19614 Beta vulgaris HOM05D004427 ORTHO05D005381 1.3e-25 120.9 270 29.6
SMO367G1171 Selaginella moellendorffii HOM05D002435 ORTHO05D002550 1.7e-25 120.6 191 35.6
CBR_g4323 Chara braunii HOM05D004427 ORTHO05D005381 2.2e-25 120.2 189 34.4
DCAR_012615 Daucus carota HOM05D004427 ORTHO05D005381 1.1e-24 117.9 249 32.9
TAR629G2862 Trochodendron aralioides HOM05D004427 ORTHO05D005381 1.1e-24 117.9 254 33.1
Ah.02g123630 Amaranthus hybridus HOM05D004427 ORTHO05D005381 2.5e-24 116.7 270 28.5
FvH4_6g48790 Fragaria vesca HOM05D004427 ORTHO05D005381 3.2e-24 116.3 153 43.1
FAN05G2706 Fragaria x ananassa HOM05D004427 ORTHO05D005381 3.2e-24 116.3 153 43.1
vmacro14781 Vaccinium macrocarpon HOM05D004427 ORTHO05D005381 3.2e-24 116.3 235 32.3
FAN02G3329 Fragaria x ananassa HOM05D004427 ORTHO05D005381 1.2e-23 114.4 153 42.5
CSS0048170 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 4.7e-23 112.5 222 32.0
FAN12G0369 Fragaria x ananassa HOM05D028185 ORTHO05D025555 6.1e-23 112.1 144 38.2
FAN17G0248 Fragaria x ananassa HOM05D004427 ORTHO05D025555 7.9e-23 111.7 144 38.2
MCO07G761 Micromonas commoda HOM05D004427 ORTHO05D005381 3.9e-22 109.4 238 28.6
CDE04G2448 Ceratophyllum demersum HOM05D004427 ORTHO05D005381 6.7e-22 108.6 156 33.3
Prupe.1G350400 Prunus persica HOM05D004427 ORTHO05D005381 2.0e-21 107.1 154 39.0
BcaC04g19664 Brassica carinata HOM05D004427 ORTHO05D005381 4.4e-21 105.9 242 30.2
TAR376G0174 Trochodendron aralioides HOM05D004427 ORTHO05D005381 5.7e-21 105.5 221 31.2
Os12g0127600 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 7.4e-21 105.1 231 32.5
TAR371G1167 Trochodendron aralioides HOM05D004427 ORTHO05D005381 1.7e-20 104.0 221 30.3
MD00G1127100 Malus domestica HOM05D004427 ORTHO05D005381 2.2e-20 103.6 150 35.3
TAR371G1244 Trochodendron aralioides HOM05D004427 ORTHO05D005381 2.8e-20 103.2 261 28.4
RcHm_v2.0_Chr4g0387651 Rosa chinensis HOM05D028185 ORTHO05D025555 1.4e-19 100.9 161 34.8
AUR62032911 Chenopodium quinoa HOM05D004427 ORTHO05D005381 7.0e-19 98.6 216 29.6
Lj3A845T93 Lonicera japonica HOM05D004427 ORTHO05D005381 1.0e-17 94.7 223 29.6
DCAR_026152 Daucus carota HOM05D004427 ORTHO05D005381 2.9e-17 93.2 237 30.8
FAN17G0618 Fragaria x ananassa HOM05D000639 ORTHO05D006731 3.8e-17 92.8 158 36.1
C09p52680 Brassica napus HOM05D004427 ORTHO05D005381 1.5e-16 90.9 129 35.7
BolC9t58136H Brassica oleracea HOM05D004427 ORTHO05D005381 1.5e-16 90.9 129 35.7
CSS0032605 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 4.2e-16 89.4 211 28.9
Actinidia09505 Actinidia chinensis HOM05D004427 ORTHO05D005381 1.6e-15 87.4 141 36.2
Solyc05g005310.3 Solanum lycopersicum HOM05D004427 ORTHO05D005381 2.7e-15 86.7 144 36.8
Os12g0103580 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 4.1e-11 72.8 242 24.4
CSS0019084 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 5.3e-11 72.4 95 41.1
FAN07G0825 Fragaria x ananassa HOM05D000639 ORTHO05D006731 9.1e-11 71.6 148 29.7
CSS0026652 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 5.9e-10 68.9 95 40.0
AUR62008635 Chenopodium quinoa HOM05D004427 ORTHO05D005381 5.9e-10 68.9 92 37.0
Manes.11G140201 Manihot esculenta HOM05D004427 ORTHO05D005381 2.9e-09 66.6 208 30.8
PRCOL_00006943 Prasinoderma coloniale HOM05D004007 ORTHO05D005127 2.9e-09 66.6 248 25.8
Lj1C183G2 Lonicera japonica HOM05D004427 ORTHO05D005381 3.8e-09 66.2 85 37.6
AUR62002202 Chenopodium quinoa HOM05D004427 ORTHO05D005381 2.5e-08 63.5 96 35.4
AUR62015500 Chenopodium quinoa HOM05D004427 ORTHO05D005381 2.1e-07 60.5 152 25.7
Cfa026731 Carpinus fangiana HOM05D004427 ORTHO05D005381 1.0e-06 58.2 118 31.4
FAN09G1397 Fragaria x ananassa HOM05D004427 ORTHO05D005381 1.4e-06 57.8 231 25.1
CAN.G682.5 Capsicum annuum HOM05D004427 ORTHO05D005381 2.3e-06 57.0 113 35.4


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