Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_6280 Physcomitrium patens HOM05D005521 ORTHO05D008962 0.0e+00 1404.4 702 100.0
Mapoly0022s0169 Marchantia polymorpha HOM05D005521 ORTHO05D008962 7.6e-284 980.3 684 67.8
SMO364G0392 Selaginella moellendorffii HOM05D005521 ORTHO05D008962 1.0e-280 969.9 689 68.2
CBR_g34178 Chara braunii HOM05D000409 ORTHO05D008962 5.0e-243 844.7 683 59.7
AagrBONN_evm.TU.Sc2ySwM_117.524 Anthoceros agrestis HOM05D005521 ORTHO05D008962 1.1e-242 843.6 685 61.9
Cre02.g141606 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 9.2e-213 744.2 686 52.0
CBR_g26004 Chara braunii HOM05D005521 ORTHO05D008962 6.2e-201 704.9 705 48.2
SMO367G1221 Selaginella moellendorffii HOM05D005521 ORTHO05D008962 8.1e-201 704.5 685 50.1
MCO10G182 Micromonas commoda HOM05D005521 ORTHO05D008962 2.6e-199 699.5 693 48.6
AagrBONN_evm.TU.Sc2ySwM_117.2769 Anthoceros agrestis HOM05D005521 ORTHO05D008962 9.9e-199 697.6 684 49.0
Cre05.g244250 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 4.1e-197 692.2 689 48.3
MCO12G056 Micromonas commoda HOM05D005521 ORTHO05D008962 3.0e-195 686.0 690 49.0
Mapoly0043s0089 Marchantia polymorpha HOM05D005521 ORTHO05D008962 1.1e-192 677.6 685 47.6
Mapoly0035s0021 Marchantia polymorpha HOM05D005521 ORTHO05D008962 1.9e-189 666.8 686 49.1
Cre16.g685450 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 3.2e-189 666.0 697 48.6
Cre02.g107050 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 3.5e-188 662.5 704 47.4
PRCOL_00006702 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 3.0e-187 659.4 687 47.6
Pp3c12_9940 Physcomitrium patens HOM05D005521 ORTHO05D008962 2.5e-186 656.4 688 47.5
SMO116G0311 Selaginella moellendorffii HOM05D005521 ORTHO05D008962 5.6e-186 655.2 693 47.6
MCO02G109 Micromonas commoda HOM05D005521 ORTHO05D008962 3.6e-185 652.5 686 47.4
PRCOL_00006732 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 2.6e-183 646.4 688 47.1
AagrBONN_evm.TU.Sc2ySwM_228.4355 Anthoceros agrestis HOM05D005521 ORTHO05D008962 2.4e-181 639.8 688 45.9
Pp3c23_17280 Physcomitrium patens HOM05D005521 ORTHO05D008962 6.0e-180 635.2 734 44.0
AagrBONN_evm.TU.Sc2ySwM_362.572 Anthoceros agrestis HOM05D005521 ORTHO05D008962 3.9e-179 632.5 687 46.1
Pp3c27_6210 Physcomitrium patens HOM05D005521 ORTHO05D008962 6.7e-179 631.7 691 47.2
Pp3c6_28550 Physcomitrium patens HOM05D005521 ORTHO05D008962 4.3e-178 629.0 689 46.4
CBR_g22156 Chara braunii HOM05D005521 ORTHO05D008962 1.4e-176 624.0 731 43.1
Cre09.g392282 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 1.4e-176 624.0 701 44.9
CBR_g5736 Chara braunii HOM05D005521 ORTHO05D008962 4.2e-173 612.5 690 44.1
SMO011G0045 Selaginella moellendorffii HOM05D005521 ORTHO05D008962 2.1e-172 610.1 687 45.0
MCO02G369 Micromonas commoda HOM05D005521 ORTHO05D008962 3.5e-172 609.4 688 43.6
PRCOL_00001499 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 7.4e-170 601.7 690 47.0
Cre12.g555950 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 8.2e-169 598.2 755 44.0
Mapoly0032s0050 Marchantia polymorpha HOM05D005521 ORTHO05D008962 5.8e-167 592.0 672 44.5
PRCOL_00006358 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 5.8e-167 592.0 690 44.5
Cre02.g107350 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 3.8e-158 562.8 764 41.9
SMO117G0259 Selaginella moellendorffii HOM05D005521 ORTHO05D008962 1.6e-156 557.4 696 40.9
CBR_g62 Chara braunii HOM05D005521 ORTHO05D008962 6.1e-156 555.4 714 40.6
Mapoly0083s0015 Marchantia polymorpha HOM05D005521 ORTHO05D008962 3.0e-155 553.1 692 41.3
MCO09G678 Micromonas commoda HOM05D005521 ORTHO05D008962 3.6e-148 529.6 699 41.3
Cre14.g627576 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 4.7e-148 529.3 708 40.1
Pp3c7_8280 Physcomitrium patens HOM05D005521 ORTHO05D008962 1.3e-145 521.2 693 39.5
PRCOL_00006448 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 2.2e-145 520.4 707 40.0
AagrBONN_evm.TU.Sc2ySwM_117.2559 Anthoceros agrestis HOM05D005521 ORTHO05D008962 1.8e-144 517.3 640 39.7
SMO332G0013 Selaginella moellendorffii HOM05D005521 ORTHO05D008962 7.0e-128 462.2 694 38.5
Cre14.g624950 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 2.0e-127 460.7 692 38.2
Mapoly0004s0117 Marchantia polymorpha HOM05D005521 ORTHO05D008962 5.7e-122 442.6 692 37.1
Mapoly0015s0073 Marchantia polymorpha HOM05D005521 ORTHO05D008962 4.8e-121 439.5 464 48.1
Pp3c17_1970 Physcomitrium patens HOM05D005521 ORTHO05D008962 6.3e-121 439.1 692 36.4
PRCOL_00002002 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 2.3e-118 430.6 690 35.7
AagrBONN_evm.TU.Sc2ySwM_344.5243 Anthoceros agrestis HOM05D005521 ORTHO05D008962 2.5e-117 427.2 634 36.8
CBR_g39582 Chara braunii HOM05D005521 ORTHO05D008962 2.3e-115 420.6 651 35.5
MCO12G412 Micromonas commoda HOM05D005521 ORTHO05D008962 1.3e-113 414.8 694 36.3
AagrBONN_evm.TU.Sc2ySwM_228.3514 Anthoceros agrestis HOM05D005521 ORTHO05D008962 1.0e-110 405.2 701 34.5
SMO352G0080 Selaginella moellendorffii HOM05D005521 ORTHO05D008962 5.6e-109 399.4 722 33.4
MCO11G302 Micromonas commoda HOM05D005521 ORTHO05D008962 1.0e-107 395.2 702 34.0
Mapoly0064s0039 Marchantia polymorpha HOM05D005521 ORTHO05D008962 3.0e-107 393.7 702 33.2
Pp3c22_18230 Physcomitrium patens HOM05D005521 ORTHO05D008962 3.0e-107 393.7 704 32.8
Pp3c22_18240 Physcomitrium patens HOM05D005521 ORTHO05D008962 3.0e-107 393.7 704 32.8
Cre12.g484250 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 2.2e-105 387.5 698 31.9
PRCOL_00003512 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 6.4e-105 386.0 707 33.1
MCO08G072 Micromonas commoda HOM05D005521 ORTHO05D008962 1.5e-101 374.8 700 31.6
PRCOL_00005933 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 3.4e-98 363.6 695 31.5
Cre11.g476050 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 7.5e-98 362.5 704 30.7
MCO13G141 Micromonas commoda HOM05D005521 ORTHO05D008962 3.7e-97 360.1 700 31.6
CBR_g57822 Chara braunii HOM05D005521 ORTHO05D008962 1.1e-93 348.6 613 34.1
CBR_g23890 Chara braunii HOM05D005521 ORTHO05D008962 1.5e-93 348.2 715 30.1
Cre09.g403800 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 2.2e-89 334.3 711 31.4
PRCOL_00005693 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 3.7e-89 333.6 716 31.0
PRCOL_00005761 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 1.0e-70 272.3 712 27.2
CBR_g45840 Chara braunii HOM05D000019 ORTHO05D008962 1.9e-69 268.1 595 29.6
AagrBONN_evm.TU.Sc2ySwM_344.1203 Anthoceros agrestis HOM05D005521 ORTHO05D008962 2.5e-69 267.7 730 28.6
MCO14G480 Micromonas commoda HOM05D005521 ORTHO05D008962 7.3e-69 266.2 715 28.1
Cre03.g145127 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 9.6e-69 265.8 724 29.3
Cre06.g265950 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 3.6e-68 263.8 963 24.1
Mapoly0070s0015 Marchantia polymorpha HOM05D005521 ORTHO05D008962 2.8e-60 237.7 729 26.1
CBR_g54114 Chara braunii HOM05D000019 ORTHO05D000002 3.8e-57 227.3 536 29.3
CBR_g4424 Chara braunii HOM05D000019 ORTHO05D000048 5.6e-53 213.4 642 27.3
Pp3c22_18120 Physcomitrium patens HOM05D005521 ORTHO05D008962 1.2e-50 205.7 456 28.9
Cre06.g250300 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D017330 5.7e-45 186.8 715 25.6
MCO14G126 Micromonas commoda HOM05D005521 ORTHO05D017330 1.5e-42 178.7 621 25.0
Mapoly0108s0011 Marchantia polymorpha HOM05D005521 ORTHO05D017330 1.9e-40 171.8 538 27.3
PRCOL_00001970 Prasinoderma coloniale HOM05D005521 ORTHO05D017330 7.2e-40 169.9 340 32.4
Cre06.g297850 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 2.5e-32 144.8 702 21.9
CBR_g38121 Chara braunii HOM05D005521 ORTHO05D017330 5.5e-32 143.7 364 28.0
Mapoly0043s0088 Marchantia polymorpha HOM05D005521 ORTHO05D253589 2.6e-29 134.8 124 48.4
Mapoly0032s0058 Marchantia polymorpha HOM05D005521 ORTHO05D008962 4.8e-28 130.6 160 41.9
Pp3c22_18130 Physcomitrium patens HOM05D005521 ORTHO05D000001 7.7e-26 123.2 249 33.3
CBR_g50869 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-21 108.6 109 45.0


User provided reference genes

Program Settings