Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_22510 Physcomitrium patens HOM05D004694 ORTHO05D006576 0.0e+00 1144.8 560 100.0
SMO367G0555 Selaginella moellendorffii HOM05D004694 ORTHO05D006576 1.8e-256 889.0 545 78.0
Mapoly0154s0035 Marchantia polymorpha HOM05D004694 ORTHO05D006576 1.3e-254 882.9 542 78.4
SEGI_27575 Sequoiadendron giganteum HOM05D004694 ORTHO05D006576 1.6e-247 859.4 562 72.6
AagrBONN_evm.TU.Sc2ySwM_117.2387 Anthoceros agrestis HOM05D004694 ORTHO05D006576 1.9e-240 835.9 538 72.9
CBR_g26132 Chara braunii HOM05D004694 ORTHO05D006576 2.3e-238 828.9 541 72.3
AagrBONN_evm.TU.Sc2ySwM_228.3843 Anthoceros agrestis HOM05D004694 ORTHO05D006576 6.0e-231 804.3 549 70.3
Solyc03g111140.3 Solanum lycopersicum HOM05D004694 ORTHO05D006576 6.0e-231 804.3 556 69.4
Sopen03g030290 Solanum pennellii HOM05D004694 ORTHO05D006576 5.1e-230 801.2 556 69.2
Nitab4.5_0001664g0050 Nicotiana tabacum HOM05D004694 ORTHO05D006576 5.6e-229 797.7 544 70.6
PGSC0003DMG400015192 Solanum tuberosum HOM05D004694 ORTHO05D006576 5.6e-229 797.7 556 68.9
Eucgr.K02748 Eucalyptus grandis HOM05D004694 ORTHO05D006576 9.5e-229 797.0 554 69.1
arahy.Tifrunner.gnm1.ann1.EW3HTN Arachis hypogaea HOM05D004694 ORTHO05D006576 2.8e-228 795.4 555 68.8
CAN.G352.42 Capsicum annuum HOM05D004694 ORTHO05D006576 4.7e-228 794.7 556 69.6
Sopen03g030280 Solanum pennellii HOM05D004694 ORTHO05D006576 8.1e-228 793.9 542 70.5
arahy.Tifrunner.gnm1.ann1.C9ULKZ Arachis hypogaea HOM05D004694 ORTHO05D006576 1.1e-227 793.5 555 68.5
Peaxi162Scf00089g00419 Petunia axillaris HOM05D004694 ORTHO05D006576 1.1e-227 793.5 556 68.9
Solyc03g111130.1 Solanum lycopersicum HOM05D004694 ORTHO05D006576 1.1e-227 793.5 542 70.3
Ciclev10019499m.g Citrus clementina HOM05D004694 ORTHO05D006576 1.8e-227 792.7 557 68.2
arahy.Tifrunner.gnm1.ann1.J1V7G3 Arachis hypogaea HOM05D004694 ORTHO05D006576 2.3e-227 792.3 555 68.5
arahy.Tifrunner.gnm1.ann1.18QE6Y Arachis hypogaea HOM05D004694 ORTHO05D006576 4.0e-227 791.6 555 68.5
Nitab4.5_0003680g0030 Nicotiana tabacum HOM05D004694 ORTHO05D006576 4.0e-227 791.6 544 70.0
arahy.Tifrunner.gnm1.ann1.HVKI9W Arachis hypogaea HOM05D004694 ORTHO05D006576 5.2e-227 791.2 555 68.5
HanXRQChr05g0154041 Helianthus annuus HOM05D004694 ORTHO05D006576 1.2e-226 790.0 542 69.6
CDE09G0730 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 2.6e-226 788.9 540 71.1
Rhsim12G0172800 Rhododendron simsii HOM05D004694 ORTHO05D006576 7.6e-226 787.3 541 68.6
Atru.chr9.1027_Atru.chr9.1028 Acer truncatum HOM05D004694 ORTHO05D006576 9.9e-226 786.9 543 69.1
CiPaw.11G010700 Carya illinoinensis HOM05D004694 ORTHO05D006576 1.3e-225 786.6 556 67.8
ClCG03G003600 Citrullus lanatus HOM05D004694 ORTHO05D006576 1.7e-225 786.2 558 67.9
THA.LOC104825008 Tarenaya hassleriana HOM05D004694 ORTHO05D006576 2.2e-225 785.8 543 69.4
Dinv04852 Davidia involucrata HOM05D004694 ORTHO05D006576 3.8e-225 785.0 560 66.4
Lalb_Chr07g0183271 Lupinus albus HOM05D004694 ORTHO05D006576 3.8e-225 785.0 557 68.0
Thecc.03G124900 Theobroma cacao HOM05D004694 ORTHO05D006576 6.4e-225 784.3 542 69.4
MELO3C002350.2 Cucumis melo HOM05D004694 ORTHO05D006576 8.4e-225 783.9 559 67.8
Cfa018868 Carpinus fangiana HOM05D004694 ORTHO05D006576 1.1e-224 783.5 542 69.4
TAR622G1078 Trochodendron aralioides HOM05D004694 ORTHO05D006576 1.1e-224 783.5 554 67.7
PSO017G1181 Papaver somniferum HOM05D004694 ORTHO05D006576 1.4e-224 783.1 541 67.8
Medtr8g028225 Medicago truncatula HOM05D004694 ORTHO05D006576 4.1e-224 781.6 541 68.6
CSS0001791 Camellia sinensis var. sinensis HOM05D004694 ORTHO05D006576 5.4e-224 781.2 556 66.9
CsaV3_1G009520 Cucumis sativus L. HOM05D004694 ORTHO05D006576 5.4e-224 781.2 551 68.1
DCAR_016413 Daucus carota HOM05D004694 ORTHO05D006576 7.1e-224 780.8 556 66.5
TWI39G0550 Tripterygium wilfordii HOM05D004694 ORTHO05D006576 7.1e-224 780.8 560 67.0
ECA246G0215 Erigeron canadensis HOM05D004694 ORTHO05D006576 9.2e-224 780.4 542 68.6
PSO478G2802 Papaver somniferum HOM05D004694 ORTHO05D006576 9.2e-224 780.4 541 67.7
Potri.015G092000 Populus trichocarpa HOM05D004694 ORTHO05D006576 9.2e-224 780.4 541 68.9
Lsat_1_v5_gn_5_13501 Lactuca sativa HOM05D004694 ORTHO05D006576 1.6e-223 779.6 541 68.6
unitig_21.g20324 Utricularia gibba HOM05D004694 ORTHO05D006576 2.1e-223 779.2 541 68.9
AT5G03860 Arabidopsis thaliana HOM05D004694 ORTHO05D006576 2.7e-223 778.9 541 69.1
MD06G1147700 Malus domestica HOM05D004694 ORTHO05D006576 6.0e-223 777.7 543 68.5
TPR.G21293 Trifolium pratense HOM05D004694 ORTHO05D006576 7.8e-223 777.3 555 67.2
Lj4g0028142 Lotus japonicus HOM05D004694 ORTHO05D006576 1.7e-222 776.2 541 67.8
Nn4g22401 Nelumbo nucifera HOM05D004694 ORTHO05D006576 1.7e-222 776.2 543 69.1
ATR0824G173 Amborella trichopoda HOM05D004694 ORTHO05D006576 2.3e-222 775.8 546 67.6
Glyma.17G128000 Glycine max HOM05D004694 ORTHO05D006576 2.3e-222 775.8 542 68.1
AUR62029660 Chenopodium quinoa HOM05D004694 ORTHO05D006576 3.0e-222 775.4 550 67.1
AL6G13430 Arabidopsis lyrata HOM05D004694 ORTHO05D006576 3.9e-222 775.0 541 68.8
EL10As4g23460 Beta vulgaris HOM05D004694 ORTHO05D006576 6.6e-222 774.2 549 67.4
Prupe.5G154600 Prunus persica HOM05D004694 ORTHO05D006576 6.6e-222 774.2 544 69.1
Aa31LG1G21410 Aethionema arabicum HOM05D004694 ORTHO05D006576 8.6e-222 773.9 541 68.6
BraA02t04789Z Brassica rapa HOM05D004694 ORTHO05D006576 1.1e-221 773.5 540 68.7
vmacro16662 Vaccinium macrocarpon HOM05D004694 ORTHO05D006576 1.5e-221 773.1 565 65.7
Aqoxy3G01456 Aquilegia oxysepala HOM05D004694 ORTHO05D006576 1.9e-221 772.7 542 67.7
Sc14g0007560 Simmondsia chinensis HOM05D004694 ORTHO05D006576 1.9e-221 772.7 542 67.7
AUR62025866 Chenopodium quinoa HOM05D004694 ORTHO05D006576 3.3e-221 771.9 551 66.4
Sabra15G0113800 Salix brachista HOM05D004694 ORTHO05D006576 3.3e-221 771.9 542 68.6
Sed0009275 Sechium edule HOM05D004694 ORTHO05D006576 3.3e-221 771.9 542 68.1
PGR044G1202 Punica granatum HOM05D004694 ORTHO05D006576 4.3e-221 771.5 542 68.1
Duzib205G1411 Durio zibethinus HOM05D004694 ORTHO05D006576 5.6e-221 771.2 542 68.6
SGA_v2.0_scaffold80G25701 Striga asiatica HOM05D004694 ORTHO05D006576 5.6e-221 771.2 559 66.7
FAN08G1582 Fragaria x ananassa HOM05D004694 ORTHO05D006576 9.6e-221 770.4 544 68.2
Glyma.05G045900 Glycine max HOM05D004694 ORTHO05D006576 9.6e-221 770.4 542 68.5
Thhalv10015335m.g Eutrema salsugineum HOM05D004694 ORTHO05D006576 1.2e-220 770.0 541 68.2
BolC2t06123H Brassica oleracea HOM05D004694 ORTHO05D006576 1.6e-220 769.6 540 68.1
C02p01580 Brassica napus HOM05D004694 ORTHO05D006576 2.1e-220 769.2 540 68.3
VMungo1215G0651 Vigna mungo HOM05D004694 ORTHO05D006576 2.1e-220 769.2 541 67.7
CANSAT11G0344 Cannabis sativa HOM05D004694 ORTHO05D006576 2.8e-220 768.8 541 68.6
FAN18G1141 Fragaria x ananassa HOM05D004694 ORTHO05D006576 2.8e-220 768.8 544 68.2
FvH4_5g07710 Fragaria vesca HOM05D004694 ORTHO05D006576 3.6e-220 768.5 544 68.0
Glyma.17G128100 Glycine max HOM05D004694 ORTHO05D006576 3.6e-220 768.5 538 68.8
Hma1.2p1_0014F.1_g009775 Hydrangea macrophylla HOM05D004694 ORTHO05D006576 3.6e-220 768.5 558 66.3
FAN04G1296 Fragaria x ananassa HOM05D004694 ORTHO05D006576 4.7e-220 768.1 544 68.0
Sp6g38870 Schrenkiella parvula HOM05D004694 ORTHO05D006576 6.2e-220 767.7 541 68.2
Phvul.003G209200 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 8.1e-220 767.3 538 68.8
RcHm_v2.0_Chr7g0190721 Rosa chinensis HOM05D004694 ORTHO05D006576 1.4e-219 766.5 545 67.7
Carub.0006s0280 Capsella rubella HOM05D004694 ORTHO05D006576 4.0e-219 765.0 541 67.8
SalBow5G3571 Salvia bowleyana HOM05D004694 ORTHO05D006576 4.0e-219 765.0 544 67.6
Oeu044618.1 Olea europaea HOM05D004694 ORTHO05D006576 1.2e-218 763.5 515 71.1
CARHR209400 Cardamine hirsuta HOM05D004694 ORTHO05D006576 1.5e-218 763.1 541 67.7
Migut.I00493 Erythranthe guttata HOM05D004694 ORTHO05D006576 1.5e-218 763.1 542 67.7
VMungo1215G1303 Vigna mungo HOM05D004694 ORTHO05D006576 1.5e-218 763.1 557 66.4
Gohir.A07G053000 Gossypium hirsutum HOM05D004694 ORTHO05D006576 1.3e-217 760.0 555 66.8
Gorai.001G060900 Gossypium raimondii HOM05D004694 ORTHO05D006576 1.3e-217 760.0 555 66.8
Gohir.D07G057400 Gossypium hirsutum HOM05D004694 ORTHO05D006576 3.8e-217 758.4 555 66.5
Sopen03g030270 Solanum pennellii HOM05D004694 ORTHO05D006576 4.9e-217 758.1 542 67.3
Lj5C97G9 Lonicera japonica HOM05D004694 ORTHO05D006576 1.1e-216 756.9 572 63.6
arahy.Tifrunner.gnm1.ann1.U91AM5 Arachis hypogaea HOM05D004694 ORTHO05D006576 1.9e-216 756.1 558 66.1
PGSC0003DMG400015194 Solanum tuberosum HOM05D004694 ORTHO05D006576 4.2e-216 755.0 542 67.2
Zm00001eb079170 Zea mays HOM05D004694 ORTHO05D006576 3.5e-215 751.9 548 66.4
BcaB05g21798 Brassica carinata HOM05D004694 ORTHO05D006576 1.0e-214 750.4 548 66.4
CAN.G352.43 Capsicum annuum HOM05D004694 ORTHO05D006576 2.3e-214 749.2 557 65.4
HPP92_023361 Vanilla planifolia HOM05D004694 ORTHO05D006576 6.6e-214 747.7 542 66.2
Ah.11g044960 Amaranthus hybridus HOM05D004694 ORTHO05D006576 2.4e-211 739.2 542 64.2
Os04g0486950 Oryza sativa ssp. japonica HOM05D004694 ORTHO05D006576 1.1e-208 730.3 552 65.0
QL10p004544 Quercus lobata HOM05D004694 ORTHO05D006576 2.7e-207 725.7 512 68.8
MSTRG.9318 Avicennia marina HOM05D004694 ORTHO05D006576 1.0e-206 723.8 497 69.4
Cpa.g.sc4.107 Carica papaya HOM05D004694 ORTHO05D006576 1.6e-204 716.5 542 65.1
SalBow1G3673 Salvia bowleyana HOM05D004694 ORTHO05D006576 2.8e-204 715.7 538 63.8
SalBow1G5430 Salvia bowleyana HOM05D004694 ORTHO05D006576 4.8e-204 714.9 538 63.6
Ca_23552_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 6.4e-201 704.5 556 61.7
CDE08G1017 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 7.9e-199 697.6 488 68.9
Actinidia08860 Actinidia chinensis HOM05D004694 ORTHO05D006576 2.3e-198 696.0 556 61.5
FAN13G0009 Fragaria x ananassa HOM05D004694 ORTHO05D006576 4.3e-197 691.8 548 62.4
Haze_07250 Corylus avellana HOM05D004694 ORTHO05D006576 1.4e-195 686.8 542 63.7
Cc04_g10080 Coffea canephora HOM05D004694 ORTHO05D006576 2.4e-195 686.0 541 61.7
MBI11_g05409_MAGBIO Magnolia biondii HOM05D004694 ORTHO05D006576 1.8e-190 669.8 552 61.2
GSVIVG01008494001 Vitis vinifera HOM05D004694 ORTHO05D006576 1.1e-184 650.6 536 59.5
Dinv11097 Davidia involucrata HOM05D004694 ORTHO05D006576 7.2e-184 647.9 448 68.3
Manes.14G054100 Manihot esculenta HOM05D004694 ORTHO05D006576 3.6e-175 619.0 417 71.7
COL.COLO4_28061 Corchorus olitorius HOM05D004694 ORTHO05D006576 2.3e-174 616.3 541 58.8
QL10p004639 Quercus lobata HOM05D004694 ORTHO05D006576 2.0e-170 603.2 417 70.5
SalBow1G1465 Salvia bowleyana HOM05D004694 ORTHO05D006576 8.2e-164 581.3 534 55.1
SalBow1G5822 Salvia bowleyana HOM05D004694 ORTHO05D006576 8.2e-164 581.3 534 55.1
Cre03.g144807 Chlamydomonas reinhardtii HOM05D004694 ORTHO05D006576 3.5e-162 575.9 544 54.2
TAR374G0737 Trochodendron aralioides HOM05D004694 ORTHO05D002940 2.0e-149 533.5 597 50.1
Phvul.003G209101 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 4.7e-135 485.7 328 70.4
Psat4g158240 Pisum sativum HOM05D004694 ORTHO05D006576 5.8e-133 478.8 325 71.4
Actinidia36796 Actinidia chinensis HOM05D004694 ORTHO05D006576 3.9e-121 439.5 542 46.7
HPP92_023371 Vanilla planifolia HOM05D004694 ORTHO05D006576 1.5e-117 427.6 305 68.9
arahy.Tifrunner.gnm1.ann1.SX4PQT Arachis hypogaea HOM05D004694 ORTHO05D006576 5.4e-115 419.1 287 71.4
Hund10205 Selenicereus undatus HOM05D004694 ORTHO05D006576 1.9e-99 367.5 329 55.0
Ca_23555_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 1.3e-95 354.8 270 59.6
Potri.012G094532 Populus trichocarpa HOM05D004694 ORTHO05D006576 1.4e-83 314.7 199 72.4
AagrBONN_evm.TU.Sc2ySwM_344.4962 Anthoceros agrestis HOM05D004694 ORTHO05D006576 5.6e-80 302.8 335 48.4
SalBow1G0618 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.4e-65 255.0 552 34.8
BcaB01g05780 Brassica carinata HOM05D004694 ORTHO05D006576 1.3e-47 195.3 183 49.7
Duzib068G0556 Durio zibethinus HOM05D004694 ORTHO05D006576 2.0e-45 188.0 139 69.1
PGSC0003DMG402015193 Solanum tuberosum HOM05D004694 ORTHO05D016782 2.6e-45 187.6 128 71.9
SalBow1G0228 Salvia bowleyana HOM05D004694 ORTHO05D006576 6.3e-39 166.4 119 63.9
BcaC08g44622 Brassica carinata HOM05D004694 ORTHO05D016782 1.4e-38 165.2 170 54.7
VMungo1383G1618 Vigna mungo HOM05D004694 ORTHO05D046692 1.6e-37 161.8 124 58.1
BraA09t39454Z Brassica rapa HOM05D002984 ORTHO05D003561 3.5e-37 160.6 127 65.4
A03p11210 Brassica napus HOM05D004694 ORTHO05D016782 4.2e-35 153.7 124 63.7
C06p36560 Brassica napus HOM05D004694 ORTHO05D016782 4.2e-35 153.7 124 63.7
arahy.Tifrunner.gnm1.ann1.0V01Q6 Arachis hypogaea HOM05D004694 ORTHO05D006576 2.1e-34 151.4 122 58.2
C06p20980 Brassica napus HOM05D004694 ORTHO05D016782 5.7e-32 143.3 117 63.2
BolC6t37284H Brassica oleracea HOM05D004694 ORTHO05D016782 5.7e-32 143.3 117 63.2
PGSC0003DMG401015193 Solanum tuberosum HOM05D004694 ORTHO05D006576 9.8e-32 142.5 76 78.9
Ca_29801_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 2.8e-31 141.0 123 52.0
A09p39550 Brassica napus HOM05D004694 ORTHO05D016782 1.1e-30 139.0 149 53.0
BraA01t01659Z Brassica rapa HOM05D004694 ORTHO05D016782 1.1e-30 139.0 149 53.0
Glyma.05G045851 Glycine max HOM05D004694 ORTHO05D046692 3.8e-28 130.6 93 62.4
Ca_28596_v3 Cicer arietinum L. HOM05D004694 ORTHO05D148954 5.5e-27 126.7 125 48.8
SalBow1G3079 Salvia bowleyana HOM05D004694 ORTHO05D006576 5.6e-19 100.1 72 61.1
Ca_03499_v3 Cicer arietinum L. HOM05D004694 ORTHO05D016782 2.1e-18 98.2 81 61.7
AUR62040389 Chenopodium quinoa HOM05D003382 ORTHO05D003930 6.8e-17 93.2 76 56.6
MD14G1161700 Malus domestica HOM05D004694 ORTHO05D248771 6.8e-17 93.2 187 35.8
Glyma.19G088650 Glycine max HOM05D004694 ORTHO05D213888 3.2e-14 84.3 57 64.9
MD14G1161800 Malus domestica HOM05D004694 ORTHO05D016782 7.5e-08 63.2 52 55.8


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