Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_19370 Physcomitrium patens HOM05D003188 ORTHO05D003602 6.7e-74 280.8 164 100.0
Pp3c27_3010 Physcomitrium patens HOM05D003188 ORTHO05D003602 1.5e-57 226.5 139 82.7
Mapoly0046s0071 Marchantia polymorpha HOM05D003188 ORTHO05D003602 1.7e-16 90.1 142 40.8
PSO017G4721 Papaver somniferum HOM05D003188 ORTHO05D003602 5.1e-13 78.6 136 39.0
PSO478G1890 Papaver somniferum HOM05D003188 ORTHO05D003602 1.5e-12 77.0 136 37.5
TAR629G2124 Trochodendron aralioides HOM05D003188 ORTHO05D003602 4.3e-12 75.5 139 33.8
Medtr8g077000 Medicago truncatula HOM05D003188 ORTHO05D003602 1.2e-11 73.9 138 39.1
HanXRQChr02g0055261 Helianthus annuus HOM05D003188 ORTHO05D003602 2.1e-11 73.2 135 40.0
Cpa.g.sc13.60 Carica papaya HOM05D003188 ORTHO05D003602 2.8e-11 72.8 143 36.4
AagrBONN_evm.TU.Sc2ySwM_344.4503 Anthoceros agrestis HOM05D003188 ORTHO05D003602 3.6e-11 72.4 136 34.6
Potri.010G102000 Populus trichocarpa HOM05D003188 ORTHO05D003602 3.6e-11 72.4 139 35.3
Lalb_Chr12g0197531 Lupinus albus HOM05D003188 ORTHO05D003602 4.7e-11 72.0 140 39.3
THA.LOC104803141 Tarenaya hassleriana HOM05D003188 ORTHO05D003602 4.7e-11 72.0 145 34.5
Lalb_Chr12g0197111 Lupinus albus HOM05D003188 ORTHO05D003602 8.1e-11 71.2 142 39.4
AagrBONN_evm.TU.Sc2ySwM_228.1658 Anthoceros agrestis HOM05D003188 ORTHO05D003602 1.1e-10 70.9 141 35.5
QL10p022977 Quercus lobata HOM05D003188 ORTHO05D003602 1.4e-10 70.5 141 37.6
Rhsim09G0110400 Rhododendron simsii HOM05D003188 ORTHO05D003602 1.4e-10 70.5 127 37.0
SGA_v2.0_scaffold159G37605 Striga asiatica HOM05D003188 ORTHO05D003602 2.4e-10 69.7 138 39.9
THA.LOC104811602 Tarenaya hassleriana HOM05D003188 ORTHO05D003602 2.4e-10 69.7 139 37.4
Manes.01G020800 Manihot esculenta HOM05D003188 ORTHO05D003602 3.1e-10 69.3 132 37.1
Psat4g043680 Pisum sativum HOM05D003188 ORTHO05D003602 3.1e-10 69.3 138 39.1
Phvul.003G177500 Phaseolus vulgaris HOM05D003188 ORTHO05D003602 4.0e-10 68.9 133 38.3
CDE05G1652 Ceratophyllum demersum HOM05D003188 ORTHO05D003602 5.2e-10 68.6 140 35.0
Dinv36901 Davidia involucrata HOM05D003188 ORTHO05D003602 5.2e-10 68.6 141 39.0
Oeu058326.2 Olea europaea HOM05D003188 ORTHO05D003602 5.2e-10 68.6 131 33.6
PGSC0003DMG400005704 Solanum tuberosum HOM05D003188 ORTHO05D003602 5.2e-10 68.6 137 35.8
CAN.G438.112 Capsicum annuum HOM05D003188 ORTHO05D003602 6.9e-10 68.2 139 35.3
ATR0787G140 Amborella trichopoda HOM05D003188 ORTHO05D003602 9.0e-10 67.8 135 37.8
Manes.12G158000 Manihot esculenta HOM05D003188 ORTHO05D003602 9.0e-10 67.8 134 35.1
SEGI_20097 Sequoiadendron giganteum HOM05D003188 ORTHO05D003602 9.0e-10 67.8 121 39.7
Solyc03g119790.3 Solanum lycopersicum HOM05D003188 ORTHO05D003602 1.2e-09 67.4 137 35.0
CsaV3_1G003600 Cucumis sativus L. HOM05D003188 ORTHO05D003602 1.5e-09 67.0 141 34.8
Glyma.06G210400 Glycine max HOM05D003188 ORTHO05D003602 1.5e-09 67.0 132 37.9
Nitab4.5_0000410g0090 Nicotiana tabacum HOM05D003188 ORTHO05D003602 1.5e-09 67.0 139 35.3
EL10Ac2g04540 Beta vulgaris HOM05D003188 ORTHO05D003602 2.0e-09 66.6 139 37.4
Nitab4.5_0003716g0120 Nicotiana tabacum HOM05D003188 ORTHO05D003602 2.0e-09 66.6 140 36.4
Aqoxy3G03899 Aquilegia oxysepala HOM05D003188 ORTHO05D003602 2.6e-09 66.2 146 32.9
Duzib138G0729 Durio zibethinus HOM05D003188 ORTHO05D003602 2.6e-09 66.2 142 33.8
Peaxi162Scf00015g00637 Petunia axillaris HOM05D003188 ORTHO05D003602 2.6e-09 66.2 136 33.8
Haze_18599 Corylus avellana HOM05D003188 ORTHO05D003602 4.4e-09 65.5 139 31.7
vmacro10787 Vaccinium macrocarpon HOM05D003188 ORTHO05D003602 4.4e-09 65.5 139 36.0
Atru.chr3.1254 Acer truncatum HOM05D003188 ORTHO05D003602 5.8e-09 65.1 133 34.6
CDE05G2945 Ceratophyllum demersum HOM05D003188 ORTHO05D003602 5.8e-09 65.1 141 36.2
Hund13349 Selenicereus undatus HOM05D003188 ORTHO05D003602 5.8e-09 65.1 129 32.6
TPR.G26763 Trifolium pratense HOM05D003188 ORTHO05D003602 5.8e-09 65.1 139 38.1
Duzib133G0881 Durio zibethinus HOM05D003188 ORTHO05D003602 7.6e-09 64.7 135 36.3
Sopen03g038640 Solanum pennellii HOM05D003188 ORTHO05D003602 7.6e-09 64.7 136 33.1
MSTRG.14163 Avicennia marina HOM05D003188 ORTHO05D003602 9.9e-09 64.3 125 36.0
CARHR002580 Cardamine hirsuta HOM05D003188 ORTHO05D003602 9.9e-09 64.3 138 35.5
Thhalv10025149m.g Eutrema salsugineum HOM05D003188 ORTHO05D003602 9.9e-09 64.3 139 36.0
Lj1g0006529 Lotus japonicus HOM05D003188 ORTHO05D003602 9.9e-09 64.3 132 37.1
Phvul.009G200700 Phaseolus vulgaris HOM05D003188 ORTHO05D003602 9.9e-09 64.3 140 35.7
DCAR_015131 Daucus carota HOM05D003188 ORTHO05D003602 1.3e-08 63.9 134 39.6
TAR371G0535 Trochodendron aralioides HOM05D003188 ORTHO05D003602 1.3e-08 63.9 142 31.7
Atru.chr12.1495 Acer truncatum HOM05D003188 ORTHO05D003602 1.7e-08 63.5 138 33.3
Aqoxy3G00385 Aquilegia oxysepala HOM05D003188 ORTHO05D003602 1.7e-08 63.5 135 31.9
MD06G1210700 Malus domestica HOM05D003188 ORTHO05D003602 1.7e-08 63.5 132 34.1
Glyma.17G121700 Glycine max HOM05D003188 ORTHO05D003602 2.2e-08 63.2 141 36.9
CANSAT64G2546 Cannabis sativa HOM05D003188 ORTHO05D003602 2.9e-08 62.8 145 33.8
Carub.0007s2083 Capsella rubella HOM05D003188 ORTHO05D003602 2.9e-08 62.8 133 32.3
CARHR227350 Cardamine hirsuta HOM05D003188 ORTHO05D003602 2.9e-08 62.8 143 32.9
Glyma.04G146000 Glycine max HOM05D003188 ORTHO05D003602 2.9e-08 62.8 133 36.1
Os08g0343300 Oryza sativa ssp. japonica HOM05D003188 ORTHO05D003602 2.9e-08 62.8 135 37.8
Cfa016042 Carpinus fangiana HOM05D003188 ORTHO05D003602 3.8e-08 62.4 139 32.4
Migut.H01201 Erythranthe guttata HOM05D003188 ORTHO05D003602 3.8e-08 62.4 142 34.5
Nn3g17701 Nelumbo nucifera HOM05D003188 ORTHO05D003602 3.8e-08 62.4 141 30.5
CDE05G0152 Ceratophyllum demersum HOM05D002339 ORTHO05D002545 4.9e-08 62.0 133 33.8
Thecc.01G174500 Theobroma cacao HOM05D003188 ORTHO05D003602 4.9e-08 62.0 141 31.9
AUR62009031 Chenopodium quinoa HOM05D003188 ORTHO05D003602 6.4e-08 61.6 130 33.8
AUR62023272 Chenopodium quinoa HOM05D003188 ORTHO05D003602 6.4e-08 61.6 130 33.8
Actinidia37847 Actinidia chinensis HOM05D003188 ORTHO05D003602 8.4e-08 61.2 136 33.1
arahy.Tifrunner.gnm1.ann1.36CJM4 Arachis hypogaea HOM05D003188 ORTHO05D003602 8.4e-08 61.2 152 32.9
Cc04_g07560 Coffea canephora HOM05D003188 ORTHO05D003602 1.1e-07 60.8 131 34.4
DCAR_011343 Daucus carota HOM05D003188 ORTHO05D003602 1.1e-07 60.8 133 33.8
TWI81G0274 Tripterygium wilfordii HOM05D003188 ORTHO05D003602 1.1e-07 60.8 137 32.8
Actinidia30194 Actinidia chinensis HOM05D003188 ORTHO05D003602 1.4e-07 60.5 130 33.8
Aqoxy5G00582 Aquilegia oxysepala HOM05D003188 ORTHO05D003602 1.4e-07 60.5 146 31.5
Prupe.5G216800 Prunus persica HOM05D003188 ORTHO05D003602 1.4e-07 60.5 134 35.1
SalBow7G4400 Salvia bowleyana HOM05D003188 ORTHO05D003602 1.4e-07 60.5 130 34.6
Ah.16g101610 Amaranthus hybridus HOM05D003188 ORTHO05D003602 1.9e-07 60.1 137 32.1
Thhalv10023437m.g Eutrema salsugineum HOM05D003188 ORTHO05D003602 1.9e-07 60.1 140 33.6
AL7G33550 Arabidopsis lyrata HOM05D003188 ORTHO05D003602 3.2e-07 59.3 136 30.9
Gorai.001G093700 Gossypium raimondii HOM05D003188 ORTHO05D003602 4.2e-07 58.9 149 30.2
VMungo1309G2361 Vigna mungo HOM05D003188 ORTHO05D003602 4.2e-07 58.9 142 33.1
TWI15G1168 Tripterygium wilfordii HOM05D003188 ORTHO05D003602 5.4e-07 58.5 146 32.9
Ciclev10019993m.g Citrus clementina HOM05D003188 ORTHO05D003602 7.1e-07 58.2 134 35.8
Sp1g02280 Schrenkiella parvula HOM05D003188 ORTHO05D003602 7.1e-07 58.2 137 33.6
Ca_02535_v3 Cicer arietinum L. HOM05D003188 ORTHO05D003602 9.3e-07 57.8 140 31.4
Gohir.D07G087600 Gossypium hirsutum HOM05D003188 ORTHO05D003602 1.2e-06 57.4 149 30.2
CiPaw.12G051000 Carya illinoinensis HOM05D003188 ORTHO05D003602 1.6e-06 57.0 140 30.0
MELO3C017285.2 Cucumis melo HOM05D003188 ORTHO05D003602 1.6e-06 57.0 140 33.6
FvH4_5g12750 Fragaria vesca HOM05D003188 ORTHO05D003602 1.6e-06 57.0 135 31.9
FAN18G0006 Fragaria x ananassa HOM05D003188 ORTHO05D003602 1.6e-06 57.0 135 31.9
Carub.0001s0239 Capsella rubella HOM05D003188 ORTHO05D003602 2.1e-06 56.6 138 31.9
Lj4g0026321 Lotus japonicus HOM05D003188 ORTHO05D003602 2.1e-06 56.6 141 34.0
AT4G20340 Arabidopsis thaliana HOM05D003188 ORTHO05D003602 2.7e-06 56.2 130 32.3
Glyma.05G013500 Glycine max HOM05D003188 ORTHO05D003602 2.7e-06 56.2 143 33.6
CiPaw.09G173500 Carya illinoinensis HOM05D003188 ORTHO05D003602 3.5e-06 55.8 89 38.2
MD14G1221400 Malus domestica HOM05D003188 ORTHO05D003602 3.5e-06 55.8 130 30.0
Dinv38591 Davidia involucrata HOM05D003188 ORTHO05D003602 4.6e-06 55.5 132 31.8
SMO196G0219 Selaginella moellendorffii HOM05D003188 ORTHO05D003602 4.6e-06 55.5 144 31.9
VMungo1215G2257 Vigna mungo HOM05D003188 ORTHO05D003602 4.6e-06 55.5 94 42.6
FAN08G1208 Fragaria x ananassa HOM05D003188 ORTHO05D003602 6.0e-06 55.1 136 31.6


User provided reference genes

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