Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_16540 Physcomitrium patens HOM05D002285 ORTHO05D009255 5.8e-68 260.8 131 100.0
Pp3c23_9310 Physcomitrium patens HOM05D002285 ORTHO05D009255 4.4e-36 154.8 119 64.7
Pp3c24_8050 Physcomitrium patens HOM05D002285 ORTHO05D009255 9.3e-34 147.1 119 60.5
Mapoly0042s0072 Marchantia polymorpha HOM05D002285 ORTHO05D009255 7.1e-18 94.4 114 42.1
AagrBONN_evm.TU.Sc2ySwM_228.1252 Anthoceros agrestis HOM05D002285 ORTHO05D009255 4.8e-14 81.6 121 37.2
TAR375G0607 Trochodendron aralioides HOM05D002285 ORTHO05D009255 5.9e-12 74.7 120 38.3
ATR0706G254 Amborella trichopoda HOM05D002285 ORTHO05D009255 5.5e-10 68.2 128 33.6
Duzib205G1165 Durio zibethinus HOM05D002285 ORTHO05D009255 5.5e-10 68.2 120 40.0
Aqoxy3G02523 Aquilegia oxysepala HOM05D002285 ORTHO05D009255 7.2e-10 67.8 137 29.9
Oeu028031.1 Olea europaea HOM05D002285 ORTHO05D009255 9.3e-10 67.4 146 34.2
CBR_g17970 Chara braunii HOM05D002285 ORTHO05D009255 1.6e-09 66.6 121 34.7
Duzib068G0948 Durio zibethinus HOM05D002285 ORTHO05D009255 2.1e-09 66.2 120 38.3
SHI10334 Sapria himalayana HOM05D002285 ORTHO05D009255 2.1e-09 66.2 135 34.1
Peaxi162Scf00084g00092 Petunia axillaris HOM05D002285 ORTHO05D009255 1.8e-08 63.2 97 41.2
Solyc08g077290.1 Solanum lycopersicum HOM05D002285 ORTHO05D009255 1.8e-08 63.2 128 37.5
Prupe.5G047100 Prunus persica HOM05D002285 ORTHO05D009255 2.3e-08 62.8 120 34.2
VMungo0251G1000 Vigna mungo HOM05D002285 ORTHO05D009255 3.9e-08 62.0 102 39.2
PSO063G2459 Papaver somniferum HOM05D002285 ORTHO05D009255 5.1e-08 61.6 122 33.6
PSO478G0928 Papaver somniferum HOM05D002285 ORTHO05D009255 5.1e-08 61.6 122 33.6
Nitab4.5_0006693g0010 Nicotiana tabacum HOM05D002285 ORTHO05D009255 1.1e-07 60.5 121 36.4
Hund11271 Selenicereus undatus HOM05D002285 ORTHO05D009255 1.1e-07 60.5 129 34.9
BcaC06g31551 Brassica carinata HOM05D002285 ORTHO05D009255 1.5e-07 60.1 134 32.8
Phvul.002G269900 Phaseolus vulgaris HOM05D002285 ORTHO05D009255 1.5e-07 60.1 102 39.2
PGR042G0121 Punica granatum HOM05D002285 ORTHO05D009255 1.9e-07 59.7 135 33.3
Sed0018690 Sechium edule HOM05D002285 ORTHO05D009255 2.5e-07 59.3 119 35.3
Sopen08g025870 Solanum pennellii HOM05D002285 ORTHO05D009255 2.5e-07 59.3 99 39.4
BraA06t27534Z Brassica rapa HOM05D002285 ORTHO05D009255 3.3e-07 58.9 101 33.7
Medtr8g093080 Medicago truncatula HOM05D002285 ORTHO05D009255 3.3e-07 58.9 99 38.4
Nitab4.5_0002055g0110 Nicotiana tabacum HOM05D002285 ORTHO05D009255 3.3e-07 58.9 121 36.4
CsaV3_3G049540 Cucumis sativus L. HOM05D002285 ORTHO05D009255 4.3e-07 58.5 119 34.5
Glyma.05G189200 Glycine max HOM05D002285 ORTHO05D009255 4.3e-07 58.5 99 39.4
Gohir.A03G002800 Gossypium hirsutum HOM05D002285 ORTHO05D009255 4.3e-07 58.5 119 35.3
Ca_17655_v3 Cicer arietinum L. HOM05D002285 ORTHO05D009255 5.7e-07 58.2 119 36.1
MELO3C003372.2 Cucumis melo HOM05D002285 ORTHO05D009255 5.7e-07 58.2 122 35.2
Gohir.D03G169500 Gossypium hirsutum HOM05D002285 ORTHO05D009255 5.7e-07 58.2 113 34.5
PGSC0003DMG400024213 Solanum tuberosum HOM05D002285 ORTHO05D009255 5.7e-07 58.2 99 38.4
Thecc.03G234200 Theobroma cacao HOM05D002285 ORTHO05D009255 5.7e-07 58.2 119 34.5
Dinv28914 Davidia involucrata HOM05D002285 ORTHO05D009255 7.4e-07 57.8 118 36.4
Lsat_1_v5_gn_5_187701 Lactuca sativa HOM05D002285 ORTHO05D009255 7.4e-07 57.8 120 35.0
FAN08G0952 Fragaria x ananassa HOM05D002285 ORTHO05D009255 9.7e-07 57.4 124 31.5
Gorai.003G179800 Gossypium raimondii HOM05D002285 ORTHO05D009255 9.7e-07 57.4 119 34.5
PSO782G1486 Papaver somniferum HOM05D002285 ORTHO05D009255 9.7e-07 57.4 133 33.8
FvH4_5g21140 Fragaria vesca HOM05D002285 ORTHO05D009255 1.3e-06 57.0 121 32.2
FAN13G2873 Fragaria x ananassa HOM05D002285 ORTHO05D009255 1.3e-06 57.0 124 29.8
FAN18G1893 Fragaria x ananassa HOM05D002285 ORTHO05D009255 1.3e-06 57.0 121 32.2
MBI04_g31973_MAGBIO Magnolia biondii HOM05D002285 ORTHO05D009255 1.3e-06 57.0 116 36.2
QL12p007193 Quercus lobata HOM05D002285 ORTHO05D009255 1.3e-06 57.0 122 31.1
Sc07g0008790 Simmondsia chinensis HOM05D002285 ORTHO05D009255 1.3e-06 57.0 125 38.4
TWI31G1223 Tripterygium wilfordii HOM05D002285 ORTHO05D009255 1.3e-06 57.0 110 35.5
Cc08_g01890 Coffea canephora HOM05D002285 ORTHO05D009255 1.6e-06 56.6 105 36.2
CDE06G0617 Ceratophyllum demersum HOM05D002285 ORTHO05D009255 2.2e-06 56.2 132 32.6
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 2.2e-06 56.2 120 35.0
Manes.15G172700 Manihot esculenta HOM05D002285 ORTHO05D009255 2.2e-06 56.2 112 33.9
RcHm_v2.0_Chr7g0208261 Rosa chinensis HOM05D002285 ORTHO05D009255 2.2e-06 56.2 119 31.9
Psat7g048120 Pisum sativum HOM05D002285 ORTHO05D009255 2.8e-06 55.8 97 39.2
Potri.001G147000 Populus trichocarpa HOM05D002285 ORTHO05D009255 2.8e-06 55.8 130 30.8
Carub.0008s0269 Capsella rubella HOM05D002285 ORTHO05D009255 3.7e-06 55.5 61 50.8
THA.LOC104806190 Tarenaya hassleriana HOM05D002285 ORTHO05D009255 3.7e-06 55.5 101 38.6
A06p46600 Brassica napus HOM05D002285 ORTHO05D009255 4.8e-06 55.1 88 35.2
Sed0003788 Sechium edule HOM05D002285 ORTHO05D009255 4.8e-06 55.1 75 38.7
Atru.chr6.1776 Acer truncatum HOM05D002285 ORTHO05D009255 6.3e-06 54.7 117 32.5
SEGI_19264 Sequoiadendron giganteum HOM05D002285 ORTHO05D009255 6.3e-06 54.7 114 31.6
SMO118G0142 Selaginella moellendorffii HOM05D002285 ORTHO05D009255 8.2e-06 54.3 90 33.3


User provided reference genes

Program Settings