Gene: Sopen08g025870
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g025870
- Transcript Identifier Sopen08g025870.1
- Gene Type Coding gene
- Location Spenn-ch08 : 65635831-65636790 : negative
Gene Family Information
- ID HOM05D002285
- #Genes/#Species 295/99
- Phylogenetic origin
- ID ORTHO05D009255
- #Genes/#Species 106/84
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen08g025870.1
Descriptions
- Description Duplicated homeodomain-like superfamily protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | LOCATED IN: endoplasmic reticulum, plasma membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Molecular chaperone, heat shock protein, Hsp40, DnaJ , Homeodomain-like , MYB-like | BEST Arabidopsis thaliana protein match is: DnaJ domain , Myb-like DNA-binding domain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006450 | IEA | InterPro | regulation of translational fidelity | |
| GO:0051083 | IEA | InterPro | 'de novo' cotranslational protein folding | |
| GO:0048767 | ISO | PLAZA Integrative Orthology | root hair elongation | AT5G45420 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030544 | IEA | InterPro | Hsp70 protein binding | |
| GO:0043022 | IEA | InterPro | ribosome binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT5G45420 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G45420 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.2.2 | RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB-related) |