Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_1390 Physcomitrium patens HOM05D005429 ORTHO05D006697 4.8e-70 268.1 174 100.0
Pp3c24_19620 Physcomitrium patens HOM05D005429 ORTHO05D006697 3.2e-50 202.2 136 75.7
Mapoly0161s0019 Marchantia polymorpha HOM05D005429 ORTHO05D006697 2.9e-43 179.1 121 75.2
SMO141G0142 Selaginella moellendorffii HOM05D005429 ORTHO05D006697 2.6e-39 166.0 118 69.5
SEGI_11251 Sequoiadendron giganteum HOM05D005429 ORTHO05D006697 5.7e-39 164.9 125 64.8
AagrBONN_evm.TU.Sc2ySwM_117.1673 Anthoceros agrestis HOM05D005429 ORTHO05D006697 1.3e-35 153.7 129 62.8
CiPaw.05G164700 Carya illinoinensis HOM05D005429 ORTHO05D006697 6.5e-35 151.4 123 61.0
vmacro06089 Vaccinium macrocarpon HOM05D005429 ORTHO05D006697 6.5e-35 151.4 122 63.1
Rhsim03G0256400 Rhododendron simsii HOM05D005429 ORTHO05D006697 1.9e-34 149.8 122 62.3
Rhsim10G0195600 Rhododendron simsii HOM05D005429 ORTHO05D006697 1.9e-34 149.8 122 62.3
Prupe.7G260300 Prunus persica HOM05D005429 ORTHO05D006697 3.2e-34 149.1 125 59.2
CDE02G4404 Ceratophyllum demersum HOM05D005429 ORTHO05D006697 4.2e-34 148.7 127 57.5
QL11p022585 Quercus lobata HOM05D005429 ORTHO05D006697 5.5e-34 148.3 131 58.0
CSS0004524 Camellia sinensis var. sinensis HOM05D005429 ORTHO05D006697 1.2e-33 147.1 122 60.7
Eucgr.C03287 Eucalyptus grandis HOM05D005429 ORTHO05D006697 1.2e-33 147.1 117 63.2
HPP92_024623 Vanilla planifolia HOM05D005429 ORTHO05D006697 1.2e-33 147.1 132 57.6
Eucgr.F00079 Eucalyptus grandis HOM05D005429 ORTHO05D006697 1.6e-33 146.7 117 63.2
Actinidia23548 Actinidia chinensis HOM05D005429 ORTHO05D006697 2.1e-33 146.4 121 60.3
CSS0015948 Camellia sinensis var. sinensis HOM05D005429 ORTHO05D006697 2.1e-33 146.4 121 61.2
CSS0034504 Camellia sinensis var. sinensis HOM05D005429 ORTHO05D006697 2.1e-33 146.4 121 61.2
ClCG11G011870 Citrullus lanatus HOM05D005429 ORTHO05D006697 2.7e-33 146.0 119 60.5
Eucgr.C04279 Eucalyptus grandis HOM05D005429 ORTHO05D006697 2.7e-33 146.0 117 63.2
CsaV3_1G046300 Cucumis sativus L. HOM05D005429 ORTHO05D006697 3.6e-33 145.6 119 60.5
TAR624G1317 Trochodendron aralioides HOM05D005429 ORTHO05D006697 3.6e-33 145.6 123 60.2
Dinv42877 Davidia involucrata HOM05D005429 ORTHO05D006697 4.7e-33 145.2 123 61.0
Dinv43223 Davidia involucrata HOM05D005429 ORTHO05D006697 4.7e-33 145.2 123 61.0
Nitab4.5_0009812g0020 Nicotiana tabacum HOM05D005429 ORTHO05D006697 4.7e-33 145.2 123 60.2
Sed0018631 Sechium edule HOM05D005429 ORTHO05D006697 6.1e-33 144.8 119 59.7
Potri.008G080700 Populus trichocarpa HOM05D005429 ORTHO05D006697 8.0e-33 144.4 123 59.3
MELO3C021751.2 Cucumis melo HOM05D005429 ORTHO05D006697 1.0e-32 144.1 119 59.7
ECA238G3108 Erigeron canadensis HOM05D005429 ORTHO05D006697 1.0e-32 144.1 123 58.5
HanXRQChr14g0437971 Helianthus annuus HOM05D005429 ORTHO05D006697 1.0e-32 144.1 123 58.5
Nitab4.5_0000548g0210 Nicotiana tabacum HOM05D005429 ORTHO05D006697 1.0e-32 144.1 123 60.2
Cc02_g22920 Coffea canephora HOM05D005429 ORTHO05D006697 1.4e-32 143.7 121 60.3
Lsat_1_v5_gn_2_59100 Lactuca sativa HOM05D005429 ORTHO05D006697 1.4e-32 143.7 127 57.5
MSTRG.26291 Avicennia marina HOM05D005429 ORTHO05D006697 1.8e-32 143.3 123 59.3
LjContig00222g0019384 Lotus japonicus HOM05D005429 ORTHO05D006697 1.8e-32 143.3 125 57.6
arahy.Tifrunner.gnm1.ann1.WT0EG6 Arachis hypogaea HOM05D005429 ORTHO05D006697 3.0e-32 142.5 123 58.5
Lj7A456T20 Lonicera japonica HOM05D005429 ORTHO05D006697 3.0e-32 142.5 123 56.9
ATR0019G018 Amborella trichopoda HOM05D005429 ORTHO05D006697 4.0e-32 142.1 123 59.3
Dinv44073 Davidia involucrata HOM05D005429 ORTHO05D006697 4.0e-32 142.1 122 59.0
Duzib116G0688 Durio zibethinus HOM05D005429 ORTHO05D006697 4.0e-32 142.1 126 57.1
PGR083G0776 Punica granatum HOM05D005429 ORTHO05D006697 4.0e-32 142.1 123 58.5
arahy.Tifrunner.gnm1.ann1.9U3PF1 Arachis hypogaea HOM05D005429 ORTHO05D006697 5.2e-32 141.7 122 59.0
Solyc03g083300.3 Solanum lycopersicum HOM05D005429 ORTHO05D006697 5.2e-32 141.7 123 58.5
Sopen03g023050 Solanum pennellii HOM05D005429 ORTHO05D006697 5.2e-32 141.7 123 58.5
GSVIVG01036692001 Vitis vinifera HOM05D005429 ORTHO05D006697 5.2e-32 141.7 125 57.6
THA.LOC104812397 Tarenaya hassleriana HOM05D005429 ORTHO05D006697 6.8e-32 141.4 123 56.9
Aqoxy3G02759 Aquilegia oxysepala HOM05D005429 ORTHO05D006697 8.8e-32 141.0 119 59.7
Cfa010706 Carpinus fangiana HOM05D005429 ORTHO05D006697 1.2e-31 140.6 124 55.6
Ca_03324_v3 Cicer arietinum L. HOM05D005429 ORTHO05D006697 1.2e-31 140.6 119 59.7
Ciclev10022715m.g Citrus clementina HOM05D005429 ORTHO05D006697 1.2e-31 140.6 124 56.5
COL.COLO4_05834 Corchorus olitorius HOM05D005429 ORTHO05D006697 1.2e-31 140.6 122 57.4
PGSC0003DMG400009083 Solanum tuberosum HOM05D005429 ORTHO05D006697 1.5e-31 140.2 123 57.7
Thecc.08G200900 Theobroma cacao HOM05D005429 ORTHO05D006697 1.5e-31 140.2 124 55.6
Medtr2g062860 Medicago truncatula HOM05D005429 ORTHO05D006697 2.0e-31 139.8 125 56.0
CANSAT56G3386 Cannabis sativa HOM05D005429 ORTHO05D006697 2.6e-31 139.4 124 56.5
Lalb_Chr01g0015641 Lupinus albus HOM05D005429 ORTHO05D006697 2.6e-31 139.4 125 56.0
Thecc.05G251100 Theobroma cacao HOM05D005429 ORTHO05D006697 2.6e-31 139.4 124 55.6
unitig_749.g13420 Utricularia gibba HOM05D005429 ORTHO05D006697 2.6e-31 139.4 129 58.9
Nn4g23117 Nelumbo nucifera HOM05D005429 ORTHO05D006697 3.4e-31 139.0 117 60.7
Glyma.08G160100 Glycine max HOM05D005429 ORTHO05D006697 4.4e-31 138.7 125 54.4
Psat1g130720 Pisum sativum HOM05D005429 ORTHO05D006697 4.4e-31 138.7 125 55.2
Gohir.D02G066500 Gossypium hirsutum HOM05D005429 ORTHO05D006697 5.7e-31 138.3 121 55.4
Phvul.005G043700 Phaseolus vulgaris HOM05D005429 ORTHO05D006697 5.7e-31 138.3 123 55.3
TWI18G1141 Tripterygium wilfordii HOM05D005429 ORTHO05D006697 7.5e-31 137.9 123 56.1
Peaxi162Scf00003g04037 Petunia axillaris HOM05D005383 ORTHO05D006722 9.8e-31 137.5 123 59.3
Manes.03G077300 Manihot esculenta HOM05D005429 ORTHO05D006697 1.3e-30 137.1 122 55.7
Gohir.A02G061000 Gossypium hirsutum HOM05D005429 ORTHO05D006697 2.2e-30 136.3 120 55.8
Gorai.005G075400 Gossypium raimondii HOM05D005429 ORTHO05D006697 2.2e-30 136.3 121 54.5
Migut.N01785 Erythranthe guttata HOM05D005429 ORTHO05D006697 2.8e-30 136.0 122 56.6
AT1G16430 Arabidopsis thaliana HOM05D005429 ORTHO05D006697 3.7e-30 135.6 123 53.7
Sp1g14580 Schrenkiella parvula HOM05D005429 ORTHO05D006697 3.7e-30 135.6 122 54.1
PSO384G3609 Papaver somniferum HOM05D005429 ORTHO05D006697 4.8e-30 135.2 119 55.5
Aa31LG7G970 Aethionema arabicum HOM05D005429 ORTHO05D006697 6.3e-30 134.8 122 54.1
AUR62006203 Chenopodium quinoa HOM05D005429 ORTHO05D006697 6.3e-30 134.8 126 55.6
Glyma.15G204300 Glycine max HOM05D005429 ORTHO05D006697 6.3e-30 134.8 119 56.3
Sabra08G0060000 Salix brachista HOM05D005429 ORTHO05D006697 6.3e-30 134.8 123 56.1
Atru.chr3.2997 Acer truncatum HOM05D005429 ORTHO05D006697 1.1e-29 134.0 137 52.6
AUR62030412 Chenopodium quinoa HOM05D005429 ORTHO05D006697 1.1e-29 134.0 126 55.6
PSO210G6955 Papaver somniferum HOM05D005429 ORTHO05D006697 1.1e-29 134.0 122 54.1
PSO339G4006 Papaver somniferum HOM05D005429 ORTHO05D006697 1.1e-29 134.0 119 53.8
Peaxi162Scf03254g00010 Petunia axillaris HOM05D005429 ORTHO05D006697 1.1e-29 134.0 123 58.5
VMungo1080G0054 Vigna mungo HOM05D005429 ORTHO05D006697 1.1e-29 134.0 123 53.7
Zm00001eb335330 Zea mays HOM05D005429 ORTHO05D006697 1.1e-29 134.0 127 55.9
BcaC05g25573 Brassica carinata HOM05D005429 ORTHO05D006697 1.4e-29 133.7 122 52.5
A06p12360 Brassica napus HOM05D005429 ORTHO05D006697 1.4e-29 133.7 122 52.5
C05p14630 Brassica napus HOM05D005429 ORTHO05D006697 1.4e-29 133.7 122 52.5
BolC5t30184H Brassica oleracea HOM05D005429 ORTHO05D006697 1.4e-29 133.7 122 52.5
BraA06t24400Z Brassica rapa HOM05D005429 ORTHO05D006697 1.4e-29 133.7 122 52.5
BcaB02g06622 Brassica carinata HOM05D005429 ORTHO05D006697 1.8e-29 133.3 122 53.3
CARHR016900 Cardamine hirsuta HOM05D005429 ORTHO05D006697 1.8e-29 133.3 122 53.3
Cpa.g.sc16.3 Carica papaya HOM05D005429 ORTHO05D006697 1.8e-29 133.3 119 53.8
SGA_v2.0_scaffold147G36309 Striga asiatica HOM05D005429 ORTHO05D006697 1.8e-29 133.3 121 54.5
Carub.0001s0730 Capsella rubella HOM05D005429 ORTHO05D006697 2.4e-29 132.9 122 51.6
PSO832G0230 Papaver somniferum HOM05D005429 ORTHO05D006697 2.4e-29 132.9 122 54.1
DCAR_027354 Daucus carota HOM05D005429 ORTHO05D006697 4.1e-29 132.1 128 53.1
Os08g0480500 Oryza sativa ssp. japonica HOM05D005429 ORTHO05D006697 9.1e-29 131.0 123 52.8
Ah.04g163250 Amaranthus hybridus HOM05D005429 ORTHO05D006697 1.2e-28 130.6 119 55.5
EL10Ac5g12584 Beta vulgaris HOM05D005429 ORTHO05D006697 2.0e-28 129.8 123 53.7
AL1G28560 Arabidopsis lyrata HOM05D005429 ORTHO05D006697 2.7e-28 129.4 122 50.8
RcHm_v2.0_Chr5g0022991 Rosa chinensis HOM05D005429 ORTHO05D006697 2.7e-28 129.4 119 52.1
AT1G07950 Arabidopsis thaliana HOM05D005429 ORTHO05D006697 3.5e-28 129.0 122 50.8
TPR.G39484 Trifolium pratense HOM05D005429 ORTHO05D006697 3.5e-28 129.0 125 51.2
AL1G18280 Arabidopsis lyrata HOM05D005429 ORTHO05D006697 4.5e-28 128.6 122 51.6
SGA_v2.0_scaffold19G08578 Striga asiatica HOM05D005429 ORTHO05D006697 4.5e-28 128.6 116 54.3
Thhalv10008938m.g Eutrema salsugineum HOM05D005429 ORTHO05D006697 5.9e-28 128.3 131 51.1
Sc16g0002320 Simmondsia chinensis HOM05D005429 ORTHO05D006697 7.7e-28 127.9 122 53.3
Hund11041 Selenicereus undatus HOM05D005429 ORTHO05D006697 1.0e-27 127.5 126 54.0
Carub.0001s1617 Capsella rubella HOM05D005429 ORTHO05D006697 1.3e-27 127.1 122 51.6
FAN25G2434 Fragaria x ananassa HOM05D005429 ORTHO05D006697 1.3e-27 127.1 119 52.9
FAN16G2737 Fragaria x ananassa HOM05D005429 ORTHO05D006697 1.7e-27 126.7 119 52.1
FAN21G1331 Fragaria x ananassa HOM05D005429 ORTHO05D006697 3.8e-27 125.6 119 51.3
Peaxi162Scf00003g03942 Petunia axillaris HOM05D005429 ORTHO05D006697 6.5e-27 124.8 122 54.1
FvH4_3g13800 Fragaria vesca HOM05D005429 ORTHO05D006697 8.6e-27 124.4 119 51.3
FAN11G0784 Fragaria x ananassa HOM05D005429 ORTHO05D006697 8.6e-27 124.4 119 51.3
unitig_26.g9672 Utricularia gibba HOM05D005429 ORTHO05D006697 1.6e-25 120.2 119 53.8
DCAR_014816 Daucus carota HOM05D005429 ORTHO05D006697 4.7e-25 118.6 119 50.4
Eucgr.C04273 Eucalyptus grandis HOM05D005429 ORTHO05D006697 2.3e-24 116.3 96 60.4
Hma1.2p1_0817F.1_g223090 Hydrangea macrophylla HOM05D005429 ORTHO05D006697 4.0e-24 115.5 125 52.0
Os01g0132700 Oryza sativa ssp. japonica HOM05D005429 ORTHO05D006697 2.0e-23 113.2 123 47.2
QL02p100061 Quercus lobata HOM05D005429 ORTHO05D006697 2.6e-23 112.8 111 55.0
Haze_03266 Corylus avellana HOM05D005429 ORTHO05D006697 3.4e-23 112.5 103 55.3
QL04p071374 Quercus lobata HOM05D005429 ORTHO05D006697 3.4e-23 112.5 107 56.1
MD02G1009700 Malus domestica HOM05D005429 ORTHO05D006697 1.3e-22 110.5 125 43.2
Peaxi162Scf00003g04025 Petunia axillaris HOM05D005429 ORTHO05D006697 1.3e-22 110.5 95 60.0
Oeu051694.1 Olea europaea HOM05D005429 ORTHO05D006697 2.4e-21 106.3 101 55.4
Haze_03271 Corylus avellana HOM05D005429 ORTHO05D001402 3.1e-21 105.9 99 53.5
Peaxi162Scf03393g00016 Petunia axillaris HOM05D005429 ORTHO05D006697 2.0e-20 103.2 90 57.8
Aqoxy3G02314 Aquilegia oxysepala HOM05D005429 ORTHO05D006697 1.6e-17 93.6 100 52.0
CAN.G1618.6 Capsicum annuum HOM05D005429 ORTHO05D006697 4.1e-13 79.0 92 46.7
CAN.G584.55 Capsicum annuum HOM05D005429 ORTHO05D006697 4.1e-13 79.0 92 46.7
Eucgr.L02967 Eucalyptus grandis HOM05D005429 ORTHO05D006697 1.7e-11 73.6 101 42.6
Oeu050474.1 Olea europaea HOM05D005429 ORTHO05D006697 3.0e-11 72.8 83 50.6
Eucgr.C04269 Eucalyptus grandis HOM05D005429 ORTHO05D006697 1.1e-10 70.9 95 45.3
Zm00001eb228470 Zea mays HOM05D005429 ORTHO05D006697 1.6e-09 67.0 51 64.7
Peaxi162Scf03393g00018 Petunia axillaris HOM05D005429 ORTHO05D006697 1.4e-08 63.9 64 46.9


User provided reference genes

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