Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 1.9e-306 1055.0 548 100.0
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 2.9e-161 572.8 554 54.3
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 4.7e-156 555.4 545 54.1
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 3.1e-123 446.4 550 43.6
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 1.2e-122 444.5 551 44.1
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 2.5e-117 426.8 553 42.7
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 5.7e-117 425.6 556 43.5
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 6.3e-116 422.2 554 43.7
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 4.1e-115 419.5 557 44.0
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 1.0e-113 414.8 557 42.5
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 1.3e-113 414.5 559 42.2
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 5.0e-113 412.5 557 42.5
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 6.5e-113 412.1 565 41.4
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 2.5e-112 410.2 546 44.5
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 4.2e-112 409.5 566 43.1
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 9.3e-112 408.3 557 41.8
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 9.3e-112 408.3 566 41.9
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 2.1e-111 407.1 565 41.4
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 3.0e-110 403.3 547 41.9
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 3.0e-110 403.3 554 40.6
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 5.1e-110 402.5 538 43.9
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 8.7e-110 401.7 544 42.1
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 1.1e-109 401.4 546 42.3
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 1.5e-109 401.0 544 42.6
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 4.3e-109 399.4 539 41.4
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 5.7e-109 399.1 556 42.1
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.6e-108 397.5 557 42.5
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 2.2e-108 397.1 548 43.1
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 2.8e-108 396.7 284 66.5
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 6.3e-108 395.6 551 41.9
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 8.2e-108 395.2 547 41.7
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 1.1e-107 394.8 548 41.1
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 2.4e-107 393.7 558 41.9
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 6.9e-107 392.1 539 42.9
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 6.9e-107 392.1 466 47.4
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 6.9e-107 392.1 542 42.6
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 6.9e-107 392.1 527 42.5
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 1.2e-106 391.3 551 42.3
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 1.5e-106 391.0 546 42.1
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 2.0e-106 390.6 541 41.2
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 2.6e-106 390.2 556 41.5
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 4.5e-106 389.4 559 41.1
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 5.9e-106 389.0 548 42.0
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 1.0e-105 388.3 554 40.8
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 1.0e-105 388.3 544 42.1
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 1.7e-105 387.5 554 40.3
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 1.7e-105 387.5 543 41.6
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 2.2e-105 387.1 553 41.2
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 2.2e-105 387.1 548 41.8
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 2.2e-105 387.1 548 41.8
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 2.9e-105 386.7 553 41.2
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 1.1e-104 384.8 539 42.1
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 1.1e-104 384.8 549 40.4
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 1.9e-104 384.0 540 41.3
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 3.2e-104 383.3 561 42.2
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 7.2e-104 382.1 534 41.9
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 1.2e-103 381.3 548 40.9
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 1.2e-103 381.3 562 39.9
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 1.6e-103 380.9 551 41.4
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 3.6e-103 379.8 549 41.5
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 3.6e-103 379.8 546 40.7
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 3.6e-103 379.8 549 41.5
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 4.6e-103 379.4 551 41.0
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 6.1e-103 379.0 560 41.6
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 1.0e-102 378.3 549 42.1
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 1.0e-102 378.3 420 48.1
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 2.3e-102 377.1 545 42.6
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 3.0e-102 376.7 549 39.9
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 3.9e-102 376.3 547 40.8
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 6.7e-102 375.6 546 40.5
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 1.5e-101 374.4 557 40.6
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 2.0e-101 374.0 598 39.0
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 4.3e-101 372.9 596 38.4
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 7.4e-101 372.1 538 40.9
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 9.7e-101 371.7 543 40.5
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 1.3e-100 371.3 547 39.9
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 2.8e-100 370.2 541 41.0
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 6.3e-100 369.0 570 39.8
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 8.2e-100 368.6 552 40.2
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 4.1e-99 366.3 448 45.8
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 5.9e-98 362.5 536 39.6
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 1.7e-97 360.9 545 39.8
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 2.2e-97 360.5 554 39.4
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 5.5e-96 355.9 551 39.7
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 1.6e-95 354.4 584 38.4
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 4.7e-95 352.8 547 39.3
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 3.3e-93 346.7 511 41.7
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 2.2e-92 344.0 389 48.1
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 8.2e-92 342.0 556 38.8
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.4e-91 341.3 249 61.4
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 7.0e-91 339.0 606 37.1
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 1.6e-90 337.8 256 60.9
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 4.5e-90 336.3 249 61.8
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 2.9e-89 333.6 386 46.1
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 3.8e-89 333.2 419 44.4
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 4.7e-87 326.2 552 39.5
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 1.0e-86 325.1 573 36.5
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 4.0e-86 323.2 483 39.5
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 4.8e-84 316.2 496 38.1
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 2.4e-83 313.9 538 38.3
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 7.0e-83 312.4 504 38.3
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 4.5e-82 309.7 255 57.6
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 1.4e-75 288.1 211 63.0
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 2.3e-70 270.8 566 33.6
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 4.0e-70 270.0 282 50.0
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 5.2e-62 243.0 265 48.3
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 3.2e-59 233.8 488 34.4
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 1.6e-55 221.5 246 50.0
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 1.9e-48 198.0 474 32.1
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 1.0e-41 175.6 431 30.9
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 2.3e-38 164.5 127 57.5
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.9e-24 118.2 126 50.0
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 8.1e-23 112.8 312 28.8
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 3.8e-20 104.0 106 53.8
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 5.1e-17 93.6 164 35.4
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 1.4e-11 75.5 42 78.6
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 7.9e-10 69.7 203 31.5
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 2.3e-09 68.2 199 27.6
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 3.9e-09 67.4 51 51.0
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 4.3e-08 63.9 51 56.9
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 2.1e-07 61.6 105 37.1
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 3.7e-07 60.8 196 27.0
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 9.0e-06 56.2 194 25.3
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 9.0e-06 56.2 157 30.6


User provided reference genes

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