Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_8930 Physcomitrium patens HOM05D003014 ORTHO05D003233 4.6e-269 930.6 468 100.0
Pp3c2_31440 Physcomitrium patens HOM05D003014 ORTHO05D003233 3.1e-124 449.5 470 56.6
Pp3c26_15000 Physcomitrium patens HOM05D003014 ORTHO05D003233 2.4e-44 184.1 204 47.5
Pp3c3_810 Physcomitrium patens HOM05D003014 ORTHO05D003233 3.3e-41 173.7 204 45.6
Pp3c13_2080 Physcomitrium patens HOM05D003014 ORTHO05D003233 6.9e-39 166.0 224 41.5
Mapoly0012s0202 Marchantia polymorpha HOM05D003014 ORTHO05D003233 6.5e-21 106.3 197 36.0
Mapoly0126s0029 Marchantia polymorpha HOM05D003014 ORTHO05D003233 6.1e-19 99.8 207 32.4
SEGI_28244 Sequoiadendron giganteum HOM05D003014 ORTHO05D003233 1.4e-15 88.6 230 32.6
Hma1.2p1_0370F.1_g137650 Hydrangea macrophylla HOM05D003014 ORTHO05D003233 2.0e-14 84.7 243 28.0
Rhsim11G0164600 Rhododendron simsii HOM05D003014 ORTHO05D003233 5.9e-14 83.2 198 31.8
Dinv15730 Davidia involucrata HOM05D003014 ORTHO05D003233 1.0e-13 82.4 189 30.7
Sabra09G0076200 Salix brachista HOM05D003014 ORTHO05D003233 2.9e-13 80.9 192 30.7
GSVIVG01009469001 Vitis vinifera HOM05D003014 ORTHO05D003233 3.8e-13 80.5 192 29.7
Nn1g04801 Nelumbo nucifera HOM05D003014 ORTHO05D003233 5.0e-13 80.1 187 31.0
Thecc.08G003900 Theobroma cacao HOM05D003014 ORTHO05D003233 6.5e-13 79.7 200 28.5
AagrBONN_evm.TU.Sc2ySwM_228.3495 Anthoceros agrestis HOM05D003014 ORTHO05D003233 8.5e-13 79.3 217 28.1
CSS0015958 Camellia sinensis var. sinensis HOM05D003014 ORTHO05D003233 8.5e-13 79.3 192 28.6
CSS0044289 Camellia sinensis var. sinensis HOM05D003014 ORTHO05D003233 8.5e-13 79.3 192 28.6
Nitab4.5_0001230g0010 Nicotiana tabacum HOM05D003014 ORTHO05D003233 8.5e-13 79.3 230 30.0
Potri.001G305100 Populus trichocarpa HOM05D003014 ORTHO05D003233 8.5e-13 79.3 192 31.2
Prupe.8G127700 Prunus persica HOM05D003014 ORTHO05D003233 1.1e-12 79.0 177 32.2
GSVIVG01031718001 Vitis vinifera HOM05D003014 ORTHO05D003233 1.1e-12 79.0 187 32.1
Gohir.A13G041500 Gossypium hirsutum HOM05D003014 ORTHO05D003233 1.4e-12 78.6 177 29.4
SMO240G0043 Selaginella moellendorffii HOM05D003014 ORTHO05D003233 1.9e-12 78.2 172 32.0
TWI56G0629 Tripterygium wilfordii HOM05D003014 ORTHO05D003233 1.9e-12 78.2 181 29.8
vmacro02036 Vaccinium macrocarpon HOM05D003014 ORTHO05D003233 2.5e-12 77.8 197 30.5
Gorai.013G045100 Gossypium raimondii HOM05D003014 ORTHO05D003233 3.2e-12 77.4 187 29.4
Gohir.D13G040200 Gossypium hirsutum HOM05D003014 ORTHO05D003233 5.5e-12 76.6 177 29.4
TAR381G0350 Trochodendron aralioides HOM05D003014 ORTHO05D003233 5.5e-12 76.6 169 30.8
CSS0023387 Camellia sinensis var. sinensis HOM05D003014 ORTHO05D003233 7.2e-12 76.3 198 28.3
Cfa004537 Carpinus fangiana HOM05D003014 ORTHO05D003233 7.2e-12 76.3 196 28.1
Gohir.A01G122633 Gossypium hirsutum HOM05D003014 ORTHO05D003233 7.2e-12 76.3 197 28.4
Nitab4.5_0000292g0060 Nicotiana tabacum HOM05D003014 ORTHO05D003233 7.2e-12 76.3 214 25.2
SMO147G0123 Selaginella moellendorffii HOM05D003014 ORTHO05D003233 7.2e-12 76.3 211 31.3
Gohir.D01G110400 Gossypium hirsutum HOM05D003014 ORTHO05D003233 9.4e-12 75.9 197 27.4
Gorai.002G135000 Gossypium raimondii HOM05D003014 ORTHO05D003233 9.4e-12 75.9 194 26.8
TAR376G0856 Trochodendron aralioides HOM05D003014 ORTHO05D003233 1.2e-11 75.5 191 28.3
Dinv42167 Davidia involucrata HOM05D003014 ORTHO05D003233 1.6e-11 75.1 236 28.0
Haze_10098 Corylus avellana HOM05D003014 ORTHO05D003233 2.7e-11 74.3 192 28.1
Gohir.A01G122666 Gossypium hirsutum HOM05D003014 ORTHO05D003233 2.7e-11 74.3 197 27.9
Phvul.003G048000 Phaseolus vulgaris HOM05D003014 ORTHO05D003233 3.6e-11 73.9 181 29.3
Sabra16G0191500 Salix brachista HOM05D000187 ORTHO05D000230 3.6e-11 73.9 230 28.3
Cc02_g18940 Coffea canephora HOM05D003014 ORTHO05D003233 4.7e-11 73.6 184 28.3
Peaxi162Scf00152g00131 Petunia axillaris HOM05D003014 ORTHO05D003233 4.7e-11 73.6 194 29.4
ECA240G1347 Erigeron canadensis HOM05D003014 ORTHO05D003233 6.1e-11 73.2 187 26.7
Duzib132G1208 Durio zibethinus HOM05D003014 ORTHO05D003233 7.9e-11 72.8 181 28.2
Sopen01g009900 Solanum pennellii HOM05D003014 ORTHO05D003233 7.9e-11 72.8 208 25.5
TWI36G1467 Tripterygium wilfordii HOM05D003014 ORTHO05D003233 7.9e-11 72.8 181 28.7
Atru.chr13.721 Acer truncatum HOM05D003014 ORTHO05D003233 1.0e-10 72.4 216 28.7
Thecc.02G102900 Theobroma cacao HOM05D003014 ORTHO05D003233 1.8e-10 71.6 189 27.0
CsaV3_7G008580 Cucumis sativus L. HOM05D003014 ORTHO05D003233 2.3e-10 71.2 204 26.5
Lsat_1_v5_gn_9_110961 Lactuca sativa HOM05D003014 ORTHO05D003233 2.3e-10 71.2 176 29.0
Prupe.1G432900 Prunus persica HOM05D003014 ORTHO05D003233 2.3e-10 71.2 177 28.2
PGR042G3868 Punica granatum HOM05D003014 ORTHO05D003233 3.0e-10 70.9 244 27.0
PGSC0003DMG400025783 Solanum tuberosum HOM05D003014 ORTHO05D003233 3.0e-10 70.9 214 24.8
Eucgr.G01493 Eucalyptus grandis HOM05D003014 ORTHO05D003233 3.9e-10 70.5 188 26.6
Sopen01g050150 Solanum pennellii HOM05D003014 ORTHO05D003233 3.9e-10 70.5 184 26.6
Manes.18G039500 Manihot esculenta HOM05D003014 ORTHO05D003233 5.1e-10 70.1 240 25.4
Sed0010940 Sechium edule HOM05D003014 ORTHO05D003233 5.1e-10 70.1 217 26.3
Solyc01g014910.2 Solanum lycopersicum HOM05D003014 ORTHO05D003233 5.1e-10 70.1 248 25.8
VMungo0251G3056 Vigna mungo HOM05D003014 ORTHO05D003233 5.1e-10 70.1 184 28.8
Ciclev10003973m.g Citrus clementina HOM05D003014 ORTHO05D003233 6.7e-10 69.7 226 27.0
SGA_v2.0_scaffold393G50697 Striga asiatica HOM05D003014 ORTHO05D003233 6.7e-10 69.7 202 28.2
Sopen09g010690 Solanum pennellii HOM05D003014 ORTHO05D003233 8.8e-10 69.3 208 25.5
PGSC0003DMG400025781 Solanum tuberosum HOM05D003014 ORTHO05D003233 1.1e-09 68.9 178 27.5
CiPaw.06G171700 Carya illinoinensis HOM05D003014 ORTHO05D003233 1.5e-09 68.6 196 27.6
Manes.10G080300 Manihot esculenta HOM05D003014 ORTHO05D003233 2.0e-09 68.2 196 30.1
Oeu013724.1 Olea europaea HOM05D003014 ORTHO05D003233 2.0e-09 68.2 190 28.9
Sopen01g010120 Solanum pennellii HOM05D003014 ORTHO05D003233 2.0e-09 68.2 212 26.4
HanXRQChr03g0074841 Helianthus annuus HOM05D003014 ORTHO05D003233 2.6e-09 67.8 228 24.6
Oeu001777.1 Olea europaea HOM05D003014 ORTHO05D003233 3.3e-09 67.4 178 27.0
HPP92_002772 Vanilla planifolia HOM05D003014 ORTHO05D003233 3.3e-09 67.4 193 28.0
EL10Ac9g21584 Beta vulgaris HOM05D003014 ORTHO05D003233 4.4e-09 67.0 219 26.9
Lj4g0009952 Lotus japonicus HOM05D003014 ORTHO05D003233 4.4e-09 67.0 182 27.5
Nitab4.5_0001428g0060 Nicotiana tabacum HOM05D003014 ORTHO05D003233 4.4e-09 67.0 197 24.9
Actinidia00429 Actinidia chinensis HOM05D003014 ORTHO05D003233 5.7e-09 66.6 174 31.0
SMO270G0033 Selaginella moellendorffii HOM05D003014 ORTHO05D003233 5.7e-09 66.6 164 29.3
SEGI_29446 Sequoiadendron giganteum HOM05D003014 ORTHO05D003233 5.7e-09 66.6 207 28.5
Sopen01g021920 Solanum pennellii HOM05D003014 ORTHO05D003233 5.7e-09 66.6 183 27.3
THA.LOC104806046 Tarenaya hassleriana HOM05D003014 ORTHO05D003233 5.7e-09 66.6 201 27.9
Lj9C355T10 Lonicera japonica HOM05D003014 ORTHO05D003233 7.4e-09 66.2 203 28.1
Oeu007296.1 Olea europaea HOM05D003014 ORTHO05D003233 7.4e-09 66.2 188 28.2
QL11p034987 Quercus lobata HOM05D003014 ORTHO05D003233 9.7e-09 65.9 191 25.1
Ciclev10030106m.g Citrus clementina HOM05D003014 ORTHO05D003233 1.3e-08 65.5 247 24.3
COL.COLO4_32636 Corchorus olitorius HOM05D003014 ORTHO05D003233 1.3e-08 65.5 204 25.0
Lj9C357T7 Lonicera japonica HOM05D003014 ORTHO05D003233 1.3e-08 65.5 203 28.1
Lalb_Chr20g0108401 Lupinus albus HOM05D003014 ORTHO05D003233 2.2e-08 64.7 232 25.4
PGSC0003DMG400025780 Solanum tuberosum HOM05D003014 ORTHO05D003233 2.2e-08 64.7 183 24.6
Gohir.D02G209050 Gossypium hirsutum HOM05D003014 ORTHO05D003233 2.8e-08 64.3 65 46.2
RcHm_v2.0_Chr6g0308241 Rosa chinensis HOM05D003014 ORTHO05D003233 2.8e-08 64.3 181 28.2
Solyc01g107950.2 Solanum lycopersicum HOM05D003014 ORTHO05D003233 2.8e-08 64.3 178 25.3
arahy.Tifrunner.gnm1.ann1.U584NJ Arachis hypogaea HOM05D003014 ORTHO05D003233 3.7e-08 63.9 278 22.3
Nitab4.5_0007431g0020 Nicotiana tabacum HOM05D003014 ORTHO05D003233 3.7e-08 63.9 197 25.4
Sopen01g050130 Solanum pennellii HOM05D003014 ORTHO05D003233 3.7e-08 63.9 178 25.8
PGSC0003DMG400025782 Solanum tuberosum HOM05D003014 ORTHO05D003233 4.8e-08 63.5 178 25.8
Sabra14G0017800 Salix brachista HOM05D003014 ORTHO05D003233 6.3e-08 63.2 188 25.0
Solyc01g057300.2 Solanum lycopersicum HOM05D003014 ORTHO05D003233 6.3e-08 63.2 183 26.8
CANSAT25G0518 Cannabis sativa HOM05D003014 ORTHO05D003233 8.2e-08 62.8 194 25.3
Solyc01g107960.4 Solanum lycopersicum HOM05D003014 ORTHO05D003233 8.2e-08 62.8 200 23.0
Sed0005157 Sechium edule HOM05D003014 ORTHO05D003233 1.1e-07 62.4 62 46.8
Sc08g0001710 Simmondsia chinensis HOM05D003014 ORTHO05D003233 1.1e-07 62.4 271 25.5
PSO210G4688 Papaver somniferum HOM05D003014 ORTHO05D003233 1.4e-07 62.0 62 46.8
AagrBONN_evm.TU.Sc2ySwM_117.2459 Anthoceros agrestis HOM05D003014 ORTHO05D003233 1.8e-07 61.6 278 24.8
ECA240G0588 Erigeron canadensis HOM05D000071 ORTHO05D003233 1.8e-07 61.6 189 24.9
QL02p004396 Quercus lobata HOM05D003014 ORTHO05D003233 2.4e-07 61.2 177 25.4
COL.COLO4_26545 Corchorus olitorius HOM05D003014 ORTHO05D003233 3.1e-07 60.8 96 35.4
Lj4g0025998 Lotus japonicus HOM05D003014 ORTHO05D003233 4.1e-07 60.5 197 26.9
SEGI_17309 Sequoiadendron giganteum HOM05D024118 ORTHO05D003233 4.1e-07 60.5 196 27.0
Psat0s5079g0040 Pisum sativum HOM05D003014 ORTHO05D003233 5.3e-07 60.1 195 26.7
Psat7g126040 Pisum sativum HOM05D003014 ORTHO05D003233 5.3e-07 60.1 189 27.5
PGSC0003DMG400045009 Solanum tuberosum HOM05D003014 ORTHO05D003233 5.3e-07 60.1 186 25.3
unitig_0.g90 Utricularia gibba HOM05D003014 ORTHO05D003233 5.3e-07 60.1 156 30.8
Psat7g178280 Pisum sativum HOM05D003014 ORTHO05D003233 7.0e-07 59.7 195 26.7
arahy.Tifrunner.gnm1.ann1.DD1GZC Arachis hypogaea HOM05D003014 ORTHO05D003233 9.1e-07 59.3 295 23.1
AUR62010242 Chenopodium quinoa HOM05D003014 ORTHO05D003233 9.1e-07 59.3 177 26.6
Potri.014G025900 Populus trichocarpa HOM05D003014 ORTHO05D003233 9.1e-07 59.3 197 26.9
Actinidia12937 Actinidia chinensis HOM05D003014 ORTHO05D003233 1.2e-06 58.9 62 43.5
MBI17_g08637_MAGBIO Magnolia biondii HOM05D003014 ORTHO05D003233 1.2e-06 58.9 220 28.2
MD15G1079900 Malus domestica HOM05D003014 ORTHO05D003233 1.2e-06 58.9 182 25.3
MELO3C018451.2 Cucumis melo HOM05D003014 ORTHO05D003233 1.6e-06 58.5 239 24.7
FAN24G2463 Fragaria x ananassa HOM05D003014 ORTHO05D003233 1.6e-06 58.5 208 22.6
SalBow3G0638 Salvia bowleyana HOM05D003014 ORTHO05D003233 1.6e-06 58.5 174 24.7
Sopen09g010770 Solanum pennellii HOM05D003014 ORTHO05D003233 1.6e-06 58.5 216 24.1
ATR0584G279 Amborella trichopoda HOM05D003014 ORTHO05D003233 2.0e-06 58.2 128 29.7
BcaNung07232 Brassica carinata HOM05D000469 ORTHO05D000323 2.0e-06 58.2 221 26.7
Sopen01g050140 Solanum pennellii HOM05D000002 ORTHO05D003233 2.0e-06 58.2 237 24.1
Cpa.g.sc21.177 Carica papaya HOM05D003014 ORTHO05D003233 2.6e-06 57.8 196 26.0
ClCG02G005950 Citrullus lanatus HOM05D003014 ORTHO05D003233 2.6e-06 57.8 234 22.6
Migut.N01183 Erythranthe guttata HOM05D003014 ORTHO05D003233 2.6e-06 57.8 202 27.2
Glyma.02G103200 Glycine max HOM05D003014 ORTHO05D003233 2.6e-06 57.8 184 26.1
SEGI_00209 Sequoiadendron giganteum HOM05D003014 ORTHO05D003233 2.6e-06 57.8 175 26.9
SEGI_08973 Sequoiadendron giganteum HOM05D024118 ORTHO05D003233 4.5e-06 57.0 180 26.1
SEGI_11419 Sequoiadendron giganteum HOM05D024118 ORTHO05D003233 4.5e-06 57.0 180 24.4
FAN20G1742 Fragaria x ananassa HOM05D003014 ORTHO05D003233 5.9e-06 56.6 198 23.2
Gohir.A03G188350 Gossypium hirsutum HOM05D003014 ORTHO05D003233 5.9e-06 56.6 163 26.4
PSO170G5216 Papaver somniferum HOM05D003014 ORTHO05D003233 5.9e-06 56.6 216 24.1
Peaxi162Scf00016g02026 Petunia axillaris HOM05D003014 ORTHO05D003233 7.7e-06 56.2 197 25.4


User provided reference genes

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