Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_35690 Physcomitrium patens HOM05D006201 ORTHO05D007178 0.0e+00 1504.2 777 100.0
Mapoly0011s0138 Marchantia polymorpha HOM05D006201 ORTHO05D007178 6.0e-88 329.7 742 33.4
AagrBONN_evm.TU.Sc2ySwM_344.1123 Anthoceros agrestis HOM05D006201 ORTHO05D007178 1.2e-83 315.5 397 44.6
MBI09_g02137_MAGBIO Magnolia biondii HOM05D006201 ORTHO05D007178 9.0e-52 209.5 405 37.3
FAN05G0393 Fragaria x ananassa HOM05D006201 ORTHO05D007178 2.2e-50 204.9 369 35.5
FAN05G0066 Fragaria x ananassa HOM05D006201 ORTHO05D007178 2.9e-50 204.5 369 35.5
TWI77G1003 Tripterygium wilfordii HOM05D006201 ORTHO05D007178 7.2e-49 199.9 378 35.7
Prupe.6G285000 Prunus persica HOM05D006201 ORTHO05D007178 4.6e-48 197.2 388 34.3
Manes.09G111900 Manihot esculenta HOM05D006201 ORTHO05D007178 6.1e-48 196.8 380 35.0
TAR623G1020 Trochodendron aralioides HOM05D006201 ORTHO05D007178 1.3e-47 195.7 370 34.3
Nn4g22431 Nelumbo nucifera HOM05D006201 ORTHO05D007178 2.3e-47 194.9 369 32.8
Ciclev10024812m.g Citrus clementina HOM05D006201 ORTHO05D007178 3.0e-47 194.5 372 34.9
PSO017G2042 Papaver somniferum HOM05D006201 ORTHO05D007178 3.0e-47 194.5 376 35.4
PSO349G0155 Papaver somniferum HOM05D006201 ORTHO05D007178 3.0e-47 194.5 377 35.5
Thecc.05G006600 Theobroma cacao HOM05D006201 ORTHO05D007178 3.0e-47 194.5 370 34.6
Sabra16G0130900 Salix brachista HOM05D006201 ORTHO05D007178 5.1e-47 193.7 388 34.0
Glyma.07G156700 Glycine max HOM05D006201 ORTHO05D007178 1.9e-46 191.8 370 33.2
MD04G1166800 Malus domestica HOM05D006201 ORTHO05D007178 2.5e-46 191.4 388 33.0
EL10Ac5g12480 Beta vulgaris HOM05D006201 ORTHO05D007178 3.3e-46 191.0 373 33.0
Gohir.A04G095500 Gossypium hirsutum HOM05D006201 ORTHO05D007178 3.3e-46 191.0 370 34.6
Cfa017112 Carpinus fangiana HOM05D006201 ORTHO05D007178 5.7e-46 190.3 369 33.1
Lalb_Chr01g0023361 Lupinus albus HOM05D006201 ORTHO05D007178 7.4e-46 189.9 373 34.3
GSVIVG01030267001 Vitis vinifera HOM05D006201 ORTHO05D007178 1.3e-45 189.1 374 34.0
VMungo1383G1579 Vigna mungo HOM05D006201 ORTHO05D007178 1.6e-45 188.7 384 32.6
Gorai.012G119200 Gossypium raimondii HOM05D006201 ORTHO05D007178 2.8e-45 188.0 370 34.6
Actinidia11549 Actinidia chinensis HOM05D006201 ORTHO05D007178 6.3e-45 186.8 370 32.7
Lj1g0025030 Lotus japonicus HOM05D006201 ORTHO05D007178 6.3e-45 186.8 381 34.4
COL.COLO4_14449 Corchorus olitorius HOM05D006201 ORTHO05D007178 1.1e-44 186.0 384 33.1
Rhsim05G0225800 Rhododendron simsii HOM05D006201 ORTHO05D007178 1.1e-44 186.0 383 33.2
Cpa.g.sc861.1 Carica papaya HOM05D006201 ORTHO05D007178 2.4e-44 184.9 384 33.6
Phvul.008G092200 Phaseolus vulgaris HOM05D006201 ORTHO05D007178 2.4e-44 184.9 371 32.3
Lsat_1_v5_gn_5_149661 Lactuca sativa HOM05D006201 ORTHO05D007178 1.5e-43 182.2 385 32.5
Atru.chr8.2337 Acer truncatum HOM05D006201 ORTHO05D007178 2.0e-43 181.8 366 33.9
Oeu020418.1 Olea europaea HOM05D006201 ORTHO05D007178 2.6e-43 181.4 370 31.4
Ca_07697_v3 Cicer arietinum L. HOM05D006201 ORTHO05D007178 3.4e-43 181.0 369 32.0
FAN14G5119 Fragaria x ananassa HOM05D006201 ORTHO05D007178 7.7e-43 179.9 422 31.3
Lj2C67G1 Lonicera japonica HOM05D006201 ORTHO05D007178 1.0e-42 179.5 407 31.7
PGR004G1794 Punica granatum HOM05D006201 ORTHO05D007178 1.0e-42 179.5 377 33.2
CSS0012693 Camellia sinensis var. sinensis HOM05D006201 ORTHO05D007178 3.8e-42 177.6 370 32.4
CsaV3_1G013180 Cucumis sativus L. HOM05D006201 ORTHO05D007178 5.0e-42 177.2 378 32.8
HanXRQChr12g0375461 Helianthus annuus HOM05D006201 ORTHO05D007178 5.0e-42 177.2 410 30.2
MSTRG.5539 Avicennia marina HOM05D006201 ORTHO05D007178 6.5e-42 176.8 370 31.1
CiPaw.09G215500 Carya illinoinensis HOM05D006201 ORTHO05D007178 6.5e-42 176.8 369 32.5
Nitab4.5_0003493g0040 Nicotiana tabacum HOM05D006201 ORTHO05D007178 6.5e-42 176.8 381 32.0
Medtr7g070280 Medicago truncatula HOM05D006201 ORTHO05D007178 1.9e-41 175.3 381 30.7
Aa31LG5G18800 Aethionema arabicum HOM05D006201 ORTHO05D007178 2.5e-41 174.9 370 30.3
Psat3g124360 Pisum sativum HOM05D006201 ORTHO05D007178 2.5e-41 174.9 369 31.2
FvH4_6g10600 Fragaria vesca HOM05D006201 ORTHO05D007178 3.2e-41 174.5 279 38.4
AL3G19800 Arabidopsis lyrata HOM05D006201 ORTHO05D007178 5.5e-41 173.7 382 29.3
Nitab4.5_0006173g0010 Nicotiana tabacum HOM05D006201 ORTHO05D007178 5.5e-41 173.7 382 31.9
TPR.G6637 Trifolium pratense HOM05D006201 ORTHO05D007178 5.5e-41 173.7 378 31.7
Haze_21088 Corylus avellana HOM05D006201 ORTHO05D007178 7.2e-41 173.3 384 30.7
Aqoxy1G01280 Aquilegia oxysepala HOM05D006201 ORTHO05D007178 9.4e-41 172.9 399 31.6
BcaC05g29618 Brassica carinata HOM05D006201 ORTHO05D007178 1.6e-40 172.2 370 29.7
QL07p033902 Quercus lobata HOM05D006201 ORTHO05D007178 2.7e-40 171.4 394 32.5
Sp3g07220 Schrenkiella parvula HOM05D006201 ORTHO05D007178 2.7e-40 171.4 381 28.6
vmacro20327 Vaccinium macrocarpon HOM05D006201 ORTHO05D007178 4.6e-40 170.6 382 33.0
Cc06_g00730 Coffea canephora HOM05D006201 ORTHO05D007178 6.1e-40 170.2 382 30.9
C05p59050 Brassica napus HOM05D006201 ORTHO05D007178 7.9e-40 169.9 370 29.7
ClCG03G002510 Citrullus lanatus HOM05D006201 ORTHO05D007178 7.9e-40 169.9 378 32.0
Carub.0003s0793 Capsella rubella HOM05D006201 ORTHO05D007178 1.4e-39 169.1 371 30.2
AT3G08800 Arabidopsis thaliana HOM05D006201 ORTHO05D007178 1.8e-39 168.7 382 29.1
CANSAT35G1627 Cannabis sativa HOM05D006201 ORTHO05D007178 1.8e-39 168.7 379 31.4
BolC5t34557H Brassica oleracea HOM05D006201 ORTHO05D007178 3.0e-39 167.9 370 29.5
ATR0605G352 Amborella trichopoda HOM05D006201 ORTHO05D007178 3.9e-39 167.5 321 35.8
Duzib093G1324 Durio zibethinus HOM05D006201 ORTHO05D007178 3.9e-39 167.5 372 33.9
BraA05t22910Z Brassica rapa HOM05D006201 ORTHO05D007178 5.1e-39 167.2 371 29.6
Thhalv10022535m.g Eutrema salsugineum HOM05D006201 ORTHO05D007178 6.7e-39 166.8 370 29.5
Sopen01g036050 Solanum pennellii HOM05D006201 ORTHO05D007178 6.7e-39 166.8 369 32.5
PGSC0003DMG400026051 Solanum tuberosum HOM05D006201 ORTHO05D007178 6.7e-39 166.8 369 32.2
A05p40010 Brassica napus HOM05D006201 ORTHO05D007178 2.6e-38 164.9 371 29.6
THA.LOC104823304 Tarenaya hassleriana HOM05D006201 ORTHO05D007178 4.3e-38 164.1 370 30.5
AUR62036404 Chenopodium quinoa HOM05D006201 ORTHO05D007178 5.7e-38 163.7 373 31.4
CARHR083120 Cardamine hirsuta HOM05D006201 ORTHO05D007178 2.2e-37 161.8 364 28.8
SEGI_17367 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 4.1e-36 157.5 229 40.2
Gohir.D04G135400 Gossypium hirsutum HOM05D006201 ORTHO05D007178 2.6e-35 154.8 282 35.5
Sed0013207 Sechium edule HOM05D006201 ORTHO05D007178 2.6e-35 154.8 381 30.7
Sc22g0002850 Simmondsia chinensis HOM05D006201 ORTHO05D007178 3.4e-35 154.5 378 28.3
AUR62030757 Chenopodium quinoa HOM05D006201 ORTHO05D007178 7.7e-35 153.3 371 30.2
RcHm_v2.0_Chr3g0461591 Rosa chinensis HOM05D006201 ORTHO05D007178 7.7e-35 153.3 254 38.2
Ah.12g059100 Amaranthus hybridus HOM05D006201 ORTHO05D007178 2.2e-34 151.8 373 29.8
Migut.J00094 Erythranthe guttata HOM05D006201 ORTHO05D007178 5.0e-34 150.6 370 28.6
CDE04G1687 Ceratophyllum demersum HOM05D006201 ORTHO05D007178 1.9e-33 148.7 367 30.2
arahy.Tifrunner.gnm1.ann1.WUZ318 Arachis hypogaea HOM05D006201 ORTHO05D007178 3.2e-33 147.9 377 27.1
Eucgr.K02944 Eucalyptus grandis HOM05D006201 ORTHO05D007178 5.5e-33 147.1 293 33.4
FAN02G1356 Fragaria x ananassa HOM05D006201 ORTHO05D007178 5.5e-33 147.1 369 29.3
SGA_v2.0_scaffold85G26680 Striga asiatica HOM05D006201 ORTHO05D007178 1.2e-32 146.0 373 31.4
arahy.Tifrunner.gnm1.ann1.0N3F9M Arachis hypogaea HOM05D006201 ORTHO05D007178 2.7e-32 144.8 374 27.5
DCAR_023994 Daucus carota HOM05D006201 ORTHO05D007178 1.8e-31 142.1 378 27.0
MELO3C004988.2 Cucumis melo HOM05D006201 ORTHO05D007178 8.8e-31 139.8 293 33.1
Zm00001eb012870 Zea mays HOM05D006201 ORTHO05D007178 7.4e-30 136.7 399 29.3
HPP92_025099 Vanilla planifolia HOM05D006201 ORTHO05D007178 2.8e-29 134.8 314 31.2
Solyc01g090260.5.1 Solanum lycopersicum HOM05D006201 ORTHO05D007178 1.4e-28 132.5 275 33.8
SMO351G0194 Selaginella moellendorffii HOM05D006201 ORTHO05D007178 5.9e-27 127.1 328 29.0
Hund14937 Selenicereus undatus HOM05D006201 ORTHO05D007178 5.9e-27 127.1 294 30.6
CAN.G1473.10 Capsicum annuum HOM05D006201 ORTHO05D007178 2.5e-25 121.7 213 34.3
AUR62044474 Chenopodium quinoa HOM05D006201 ORTHO05D007178 1.2e-24 119.4 396 27.5
CBR_g8780 Chara braunii HOM05D006201 ORTHO05D007178 3.3e-22 111.3 338 27.8
Dinv12170 Davidia involucrata HOM05D006201 ORTHO05D007178 6.3e-21 107.1 230 34.8
ECA248G2923 Erigeron canadensis HOM05D006201 ORTHO05D007178 8.2e-21 106.7 297 30.6
unitig_578.g15909 Utricularia gibba HOM05D006201 ORTHO05D007178 1.1e-17 96.3 376 26.1
Peaxi162Scf00028g00419 Petunia axillaris HOM05D006201 ORTHO05D007178 2.2e-13 82.0 296 25.3
AagrBONN_evm.TU.Sc2ySwM_228.3488 Anthoceros agrestis HOM05D006201 ORTHO05D007178 3.1e-12 78.2 102 37.3
Dinv12171 Davidia involucrata HOM05D006201 ORTHO05D007178 3.5e-11 74.7 136 30.1
CANSAT64G1736 Cannabis sativa HOM05D006201 ORTHO05D007178 1.9e-09 68.9 128 33.6
SEGI_33665 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 6.1e-08 63.9 82 41.5
AagrBONN_evm.TU.Sc2ySwM_228.3490 Anthoceros agrestis HOM05D006201 ORTHO05D007178 5.2e-07 60.8 80 41.2


User provided reference genes

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