Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 4.6e-97 357.8 175 100.0
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 6.4e-38 161.4 129 55.0
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 1.4e-37 160.2 129 53.5
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 1.8e-37 159.8 125 56.8
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 2.4e-37 159.5 125 56.0
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 2.4e-37 159.5 125 56.0
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 3.2e-37 159.1 126 56.3
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 4.1e-37 158.7 128 53.1
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 7.0e-37 157.9 125 55.2
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 7.0e-37 157.9 129 54.3
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 9.2e-37 157.5 125 56.0
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 9.2e-37 157.5 125 56.8
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 1.2e-36 157.1 124 54.8
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 1.6e-36 156.8 125 54.4
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 2.0e-36 156.4 128 52.3
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 2.0e-36 156.4 128 51.6
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 2.0e-36 156.4 124 55.6
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 2.7e-36 156.0 125 57.6
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 3.5e-36 155.6 124 57.3
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 3.5e-36 155.6 125 53.6
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 4.6e-36 155.2 124 57.3
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 4.6e-36 155.2 131 55.7
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 4.6e-36 155.2 128 51.6
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 4.6e-36 155.2 133 51.9
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 4.6e-36 155.2 124 55.6
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 5.9e-36 154.8 125 55.2
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 5.9e-36 154.8 125 54.4
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 5.9e-36 154.8 125 53.6
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 5.9e-36 154.8 125 55.2
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 5.9e-36 154.8 125 54.4
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 7.8e-36 154.5 125 55.2
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 7.8e-36 154.5 125 55.2
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 7.8e-36 154.5 125 53.6
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 7.8e-36 154.5 125 55.2
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 7.8e-36 154.5 124 52.4
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 1.0e-35 154.1 125 53.6
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 1.0e-35 154.1 125 54.4
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 1.0e-35 154.1 125 54.4
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 1.0e-35 154.1 125 54.4
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 1.0e-35 154.1 123 56.1
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 1.3e-35 153.7 125 53.6
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 1.3e-35 153.7 125 53.6
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.7e-35 153.3 125 53.6
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 1.7e-35 153.3 125 53.6
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 1.7e-35 153.3 125 53.6
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 1.7e-35 153.3 125 54.4
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 2.3e-35 152.9 129 49.6
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 2.9e-35 152.5 125 50.4
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 3.9e-35 152.1 125 51.2
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 3.9e-35 152.1 127 53.5
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 3.9e-35 152.1 126 53.2
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 5.0e-35 151.8 125 56.0
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 6.6e-35 151.4 125 55.2
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 6.6e-35 151.4 125 53.6
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 8.6e-35 151.0 125 52.0
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 8.6e-35 151.0 128 51.6
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 1.1e-34 150.6 125 51.2
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 1.1e-34 150.6 125 52.0
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 1.1e-34 150.6 125 52.0
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 1.1e-34 150.6 125 52.0
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 1.1e-34 150.6 125 52.0
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 1.1e-34 150.6 125 52.0
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 1.1e-34 150.6 125 52.0
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 1.1e-34 150.6 125 52.8
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 1.1e-34 150.6 128 50.0
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 1.5e-34 150.2 128 50.0
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 1.5e-34 150.2 131 53.4
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 1.5e-34 150.2 125 54.4
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 2.5e-34 149.4 125 51.2
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 2.5e-34 149.4 125 51.2
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 2.5e-34 149.4 124 53.2
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 3.3e-34 149.1 136 47.8
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 5.6e-34 148.3 125 50.4
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 7.3e-34 147.9 125 50.4
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 7.3e-34 147.9 126 51.6
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 7.3e-34 147.9 126 51.6
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 7.3e-34 147.9 132 49.2
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 7.3e-34 147.9 122 53.3
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 7.3e-34 147.9 125 52.0
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 1.2e-33 147.1 123 52.8
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 1.2e-33 147.1 125 49.6
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 1.2e-33 147.1 126 52.4
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 1.6e-33 146.7 125 48.8
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 1.6e-33 146.7 129 49.6
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.6e-33 146.7 126 50.8
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 2.1e-33 146.4 125 51.2
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 2.1e-33 146.4 124 55.6
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 2.1e-33 146.4 125 50.4
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 2.8e-33 146.0 126 51.6
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 2.8e-33 146.0 126 51.6
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 4.7e-33 145.2 125 52.8
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 4.7e-33 145.2 126 50.8
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 6.2e-33 144.8 124 50.0
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 6.2e-33 144.8 126 49.2
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 8.0e-33 144.4 125 49.6
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 1.4e-32 143.7 126 50.0
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 2.3e-32 142.9 119 52.9
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 3.1e-32 142.5 127 48.8
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 2.6e-31 139.4 137 46.0
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 4.4e-31 138.7 161 42.2
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 9.8e-31 137.5 135 48.9
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 2.2e-30 136.3 125 52.8
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 1.1e-29 134.0 110 56.4
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 1.9e-29 133.3 127 48.0
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 1.2e-23 114.0 89 53.9
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 2.3e-19 99.8 183 32.8
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 1.9e-18 96.7 80 53.8
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 6.2e-17 91.7 71 56.3
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 8.9e-16 87.8 72 51.4
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 1.9e-10 70.1 63 50.8
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 1.9e-10 70.1 67 49.3
Cre07.g352550 Chlamydomonas reinhardtii HOM05D027504 ORTHO05D028778 1.2e-09 67.4 115 39.1
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 2.1e-09 66.6 79 43.0
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 3.6e-09 65.9 55 50.9
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 6.2e-09 65.1 54 50.0
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 8.1e-09 64.7 55 52.7
Cre01.g024850 Chlamydomonas reinhardtii HOM05D027504 ORTHO05D028778 5.2e-08 62.0 121 35.5


User provided reference genes

Program Settings