Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 6.9e-259 896.7 434 100.0
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 5.4e-179 631.3 431 70.3
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 2.1e-154 549.7 429 59.7
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 1.7e-148 530.0 432 58.1
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 1.4e-142 510.4 429 56.6
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 7.8e-138 494.6 430 54.9
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 2.0e-133 479.9 426 54.0
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 2.2e-132 476.5 436 52.1
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 1.9e-128 463.4 425 51.5
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 8.1e-127 458.0 438 51.4
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 1.8e-126 456.8 426 51.2
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 2.4e-126 456.4 425 50.8
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 4.0e-126 455.7 426 52.3
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 4.0e-126 455.7 438 51.1
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 6.9e-126 454.9 431 49.4
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 9.0e-126 454.5 431 49.4
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 1.2e-125 454.1 426 51.2
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.2e-125 454.1 425 50.6
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 7.6e-125 451.4 427 51.8
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 2.2e-124 449.9 428 49.8
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 2.2e-124 449.9 425 49.9
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 4.9e-124 448.7 425 49.9
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 8.4e-124 448.0 426 50.5
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 1.1e-123 447.6 425 51.1
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 1.1e-123 447.6 425 49.9
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 3.2e-123 446.0 432 48.8
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 3.2e-123 446.0 426 50.2
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 3.2e-123 446.0 425 50.4
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 7.1e-123 444.9 427 51.1
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 7.1e-123 444.9 428 50.2
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 9.3e-123 444.5 425 50.8
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 9.3e-123 444.5 425 49.9
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.2e-122 444.1 426 50.0
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.2e-122 444.1 425 51.1
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.6e-122 443.7 426 50.0
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 2.1e-122 443.4 425 49.6
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 7.9e-122 441.4 426 49.5
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 1.0e-121 441.0 425 50.4
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 1.0e-121 441.0 425 48.9
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 1.3e-121 440.7 425 49.9
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 1.3e-121 440.7 425 49.9
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.8e-121 440.3 425 48.7
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 1.8e-121 440.3 429 49.4
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 2.3e-121 439.9 425 48.9
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 2.3e-121 439.9 425 48.7
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 2.3e-121 439.9 434 49.8
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 2.3e-121 439.9 434 49.8
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 2.3e-121 439.9 425 49.6
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 5.1e-121 438.7 429 50.1
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 8.7e-121 438.0 429 49.9
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 1.1e-120 437.6 429 49.4
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 1.1e-120 437.6 425 49.6
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 2.5e-120 436.4 431 47.8
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 3.3e-120 436.0 426 48.6
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 3.3e-120 436.0 425 50.6
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 4.3e-120 435.6 426 49.1
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 4.3e-120 435.6 425 48.9
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 5.7e-120 435.3 427 48.5
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 5.7e-120 435.3 444 48.9
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 9.6e-120 434.5 426 50.7
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 9.6e-120 434.5 425 48.9
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 1.3e-119 434.1 426 49.5
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 1.3e-119 434.1 430 48.6
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 2.1e-119 433.3 456 46.1
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 3.7e-119 432.6 426 49.1
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 3.7e-119 432.6 425 48.5
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 4.8e-119 432.2 425 49.4
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 4.8e-119 432.2 426 49.1
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 8.2e-119 431.4 425 49.9
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.4e-118 430.6 423 49.4
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 4.0e-118 429.1 425 48.2
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 5.3e-118 428.7 448 48.0
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 6.9e-118 428.3 425 49.6
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 1.2e-117 427.6 425 48.0
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 1.5e-117 427.2 441 47.6
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 1.5e-117 427.2 441 47.6
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 1.5e-117 427.2 426 49.5
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 1.5e-117 427.2 426 48.8
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 2.6e-117 426.4 426 48.4
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 3.4e-117 426.0 433 48.5
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 1.0e-116 424.5 425 48.0
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 1.3e-116 424.1 426 49.1
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 1.3e-116 424.1 425 47.5
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 1.3e-116 424.1 427 48.7
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 2.2e-116 423.3 426 48.8
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 2.2e-116 423.3 426 48.8
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 2.9e-116 422.9 426 48.4
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 3.8e-116 422.5 426 48.8
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 8.4e-116 421.4 425 48.2
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 1.1e-115 421.0 427 48.2
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 2.5e-115 419.9 461 46.0
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 3.2e-115 419.5 427 46.4
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 4.2e-115 419.1 425 48.0
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 7.1e-115 418.3 420 47.6
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 9.3e-115 417.9 427 48.7
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 9.3e-115 417.9 425 47.8
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 1.6e-114 417.2 427 46.6
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 2.1e-114 416.8 426 46.7
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.8e-113 413.7 425 47.1
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 2.3e-113 413.3 425 48.2
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.3e-113 413.3 425 46.6
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 3.0e-113 412.9 435 47.4
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 3.7e-111 406.0 480 42.5
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 1.4e-110 404.1 422 47.9
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 5.3e-110 402.1 434 46.5
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 5.5e-107 392.1 536 40.1
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 1.9e-99 367.1 337 52.8
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 1.4e-97 360.9 425 46.1
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 7.4e-96 355.1 362 48.9
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 3.8e-92 342.8 415 42.7
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 3.6e-90 336.3 361 47.6
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 2.3e-89 333.6 289 54.0
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 8.0e-82 308.5 354 43.2
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 8.0e-82 308.5 437 39.4
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 1.4e-78 297.7 265 53.2
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 5.0e-76 289.3 264 52.3
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 1.4e-73 281.2 349 41.8
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 2.6e-64 250.4 198 59.6
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 9.5e-59 231.9 233 46.4
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 1.9e-46 191.0 184 51.6
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 8.4e-39 165.6 190 43.7
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 3.3e-27 127.1 139 40.3
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 5.3e-17 93.2 96 40.6
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 4.9e-15 86.7 89 44.9
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.4e-14 85.1 87 42.5
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 2.4e-14 84.3 87 42.5
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 1.8e-12 78.2 340 22.4


User provided reference genes

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