Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 0.0e+00 1615.1 891 100.0
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 0.0e+00 1097.4 893 67.2
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 4.9e-227 792.0 914 51.4
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 8.7e-184 648.3 981 45.0
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 1.5e-172 610.9 976 41.0
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 5.5e-146 522.7 896 36.2
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 3.5e-124 450.3 894 34.6
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 1.3e-123 448.4 892 34.4
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 1.7e-123 448.0 892 34.3
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 4.3e-122 443.4 1189 31.5
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 5.6e-122 443.0 895 33.9
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 1.6e-121 441.4 895 33.1
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 2.1e-121 441.0 899 33.1
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 4.7e-121 439.9 892 33.3
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 1.4e-120 438.3 892 34.1
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 3.1e-120 437.2 892 33.9
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 8.9e-120 435.6 890 32.6
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 1.2e-119 435.3 892 33.7
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 1.2e-119 435.3 889 33.7
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 1.2e-119 435.3 891 32.9
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 1.5e-119 434.9 889 33.3
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 2.0e-119 434.5 890 33.0
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 3.4e-119 433.7 892 33.3
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 5.8e-119 433.0 895 32.6
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 5.8e-119 433.0 888 33.3
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 2.2e-118 431.0 888 32.9
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 1.9e-117 427.9 893 33.3
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 5.4e-117 426.4 891 33.8
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 9.2e-117 425.6 892 32.5
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 1.6e-116 424.9 892 32.6
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 3.5e-116 423.7 892 32.8
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 4.6e-116 423.3 888 32.3
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 6.0e-116 422.9 892 31.2
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 7.8e-116 422.5 897 31.4
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 7.3e-114 416.0 891 32.0
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 2.8e-113 414.1 889 32.1
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 2.8e-113 414.1 892 32.0
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.8e-113 414.1 893 32.1
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 2.8e-113 414.1 891 32.0
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 1.1e-112 412.1 889 31.9
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 1.1e-112 412.1 889 31.9
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 1.8e-112 411.4 886 31.7
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 2.3e-112 411.0 889 31.8
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 3.1e-112 410.6 889 31.9
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 5.2e-112 409.8 889 31.8
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 6.8e-112 409.5 892 31.8
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 8.9e-112 409.1 892 32.0
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 1.5e-111 408.3 889 31.9
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 2.6e-111 407.5 891 32.2
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 2.6e-111 407.5 890 32.9
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.6e-111 407.5 893 31.6
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 2.6e-111 407.5 889 30.1
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 7.5e-111 406.0 952 30.6
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 2.9e-110 404.1 892 32.7
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 1.1e-109 402.1 890 31.9
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 1.1e-109 402.1 892 32.0
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 1.4e-109 401.7 890 32.0
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 2.4e-109 401.0 891 31.1
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 9.2e-109 399.1 889 31.0
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 9.2e-109 399.1 895 30.9
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 4.6e-108 396.7 890 31.2
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 1.0e-107 395.6 868 31.5
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 2.3e-107 394.4 889 30.3
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 5.6e-106 389.8 888 30.7
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 1.2e-105 388.7 903 31.3
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 6.2e-105 386.3 891 31.9
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 1.8e-104 384.8 891 31.1
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 2.3e-104 384.4 851 32.5
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 4.0e-104 383.6 850 32.2
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 5.2e-104 383.3 892 30.5
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 9.9e-103 379.0 898 30.6
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 1.3e-102 378.6 889 29.5
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 2.9e-102 377.5 893 30.6
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 1.4e-101 375.2 893 30.5
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 5.4e-101 373.2 893 31.1
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 1.3e-99 368.6 926 30.2
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 1.7e-99 368.2 890 31.3
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 2.3e-99 367.9 893 30.2
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 1.5e-98 365.2 892 30.8
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 3.4e-95 354.0 889 30.0
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 7.6e-95 352.8 849 30.5
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 2.2e-94 351.3 894 29.4
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 4.9e-94 350.1 804 32.2
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 1.5e-90 338.6 938 29.3
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 1.5e-90 338.6 938 29.3
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 5.6e-90 336.7 892 27.8
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 8.1e-89 332.8 949 27.6
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 1.4e-85 322.0 798 30.6
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 1.9e-85 321.6 953 28.4
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 1.9e-85 321.6 814 29.9
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 8.7e-83 312.8 816 29.2
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 2.8e-81 307.8 802 30.4
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 1.8e-80 305.1 917 27.9
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 6.9e-80 303.1 282 57.4
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 2.1e-73 281.6 269 54.6
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 4.8e-73 280.4 243 53.9
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 6.2e-73 280.0 256 53.5
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 2.6e-71 274.6 235 59.1
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 2.6e-71 274.6 242 53.3
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 2.9e-70 271.2 241 53.5
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 4.9e-70 270.4 240 52.5
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 4.2e-69 267.3 245 52.7
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.1e-68 265.0 243 50.6
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 8.2e-65 253.1 220 53.2
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.4e-64 252.3 247 49.0
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 2.4e-64 251.5 276 50.7
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 4.1e-64 250.8 792 26.6
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 1.2e-63 249.2 863 25.4
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 7.6e-63 246.5 277 50.2
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 6.1e-60 236.9 254 50.0
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 1.8e-56 225.3 199 57.3
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 5.9e-47 193.7 175 56.6
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 1.0e-43 183.0 269 40.9
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 8.2e-41 173.3 128 70.3
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 3.5e-23 114.8 259 30.1
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 2.2e-22 112.1 80 62.5
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 4.4e-18 97.8 409 23.2
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 6.6e-14 84.0 333 24.9
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 1.2e-10 73.2 106 38.7
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 4.4e-10 71.2 71 46.5
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 5.4e-08 64.3 49 59.2
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 7.0e-08 63.9 73 50.7
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 5.9e-07 60.8 102 37.3
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 3.9e-06 58.2 51 54.9


User provided reference genes

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