Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c17_23470 Physcomitrium patens HOM05D005854 ORTHO05D007175 5.0e-105 384.8 249 100.0
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 9.1e-30 134.8 225 39.6
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 9.1e-30 134.8 227 39.2
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.5e-29 134.0 227 38.8
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 2.0e-29 133.7 227 38.8
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 5.9e-29 132.1 227 38.3
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 1.0e-28 131.3 231 38.5
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 1.7e-28 130.6 223 38.1
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 2.2e-28 130.2 212 39.6
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 3.8e-28 129.4 192 39.6
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 5.0e-28 129.0 224 37.9
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 8.5e-28 128.3 231 37.2
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 1.1e-27 127.9 229 38.0
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 1.4e-27 127.5 223 37.2
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 1.9e-27 127.1 231 36.8
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 3.2e-27 126.3 220 38.2
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 4.2e-27 125.9 216 38.4
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 5.5e-27 125.6 228 37.7
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis HOM05D005854 ORTHO05D007175 7.2e-27 125.2 179 41.3
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 7.2e-27 125.2 224 36.6
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 7.2e-27 125.2 175 40.6
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 7.2e-27 125.2 228 37.3
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 1.6e-26 124.0 228 34.6
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 1.6e-26 124.0 192 39.6
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 2.1e-26 123.6 246 37.0
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 2.1e-26 123.6 213 36.6
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 2.1e-26 123.6 219 36.1
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 4.7e-26 122.5 224 37.1
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 6.1e-26 122.1 195 39.0
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 6.1e-26 122.1 185 39.5
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 6.1e-26 122.1 225 36.4
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 7.9e-26 121.7 195 39.0
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 1.0e-25 121.3 224 36.6
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 1.0e-25 121.3 198 37.4
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 1.4e-25 120.9 201 37.8
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 1.8e-25 120.6 225 36.9
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 3.0e-25 119.8 217 35.9
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 5.1e-25 119.0 194 37.1
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 5.1e-25 119.0 216 37.0
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 5.1e-25 119.0 200 37.0
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 6.7e-25 118.6 223 38.1
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 6.7e-25 118.6 204 39.2
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 6.7e-25 118.6 228 36.4
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 8.8e-25 118.2 216 37.0
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 8.8e-25 118.2 208 36.5
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 8.8e-25 118.2 242 35.1
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 1.1e-24 117.9 230 36.5
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 1.1e-24 117.9 231 36.8
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 1.5e-24 117.5 226 36.7
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 2.0e-24 117.1 195 37.4
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 2.0e-24 117.1 175 39.4
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 2.0e-24 117.1 219 36.5
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 2.0e-24 117.1 199 38.2
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 2.6e-24 116.7 228 36.8
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 2.6e-24 116.7 224 36.6
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 2.6e-24 116.7 227 35.7
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 2.6e-24 116.7 230 35.7
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 2.6e-24 116.7 220 37.3
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 3.3e-24 116.3 196 38.3
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 3.3e-24 116.3 185 37.3
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 4.4e-24 115.9 220 36.4
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 4.4e-24 115.9 200 36.0
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 4.4e-24 115.9 200 36.0
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 5.7e-24 115.5 231 36.8
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 5.7e-24 115.5 222 35.6
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 5.7e-24 115.5 223 35.4
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 7.4e-24 115.2 225 36.4
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 7.4e-24 115.2 252 31.7
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 1.7e-23 114.0 200 36.0
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 2.8e-23 113.2 180 39.4
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 2.8e-23 113.2 225 35.6
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 2.8e-23 113.2 180 37.8
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 2.8e-23 113.2 225 34.2
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 3.7e-23 112.8 234 35.9
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 3.7e-23 112.8 219 36.1
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 3.7e-23 112.8 200 36.0
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 4.8e-23 112.5 182 34.6
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 4.8e-23 112.5 197 35.5
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 6.3e-23 112.1 225 35.1
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 6.3e-23 112.1 223 34.1
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 8.2e-23 111.7 197 37.1
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 8.2e-23 111.7 235 35.7
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 1.1e-22 111.3 228 36.0
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 1.1e-22 111.3 228 36.0
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 1.1e-22 111.3 229 34.9
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 1.4e-22 110.9 204 37.7
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 1.8e-22 110.5 214 35.0
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 3.1e-22 109.8 234 35.9
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 4.1e-22 109.4 219 36.1
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 4.1e-22 109.4 219 36.1
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 9.1e-22 108.2 231 32.9
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 9.1e-22 108.2 235 34.5
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 1.2e-21 107.8 216 32.4
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 1.5e-21 107.5 225 34.7
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 2.6e-21 106.7 214 33.6
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 2.6e-21 106.7 199 34.7
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 3.4e-21 106.3 234 35.5
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 3.4e-21 106.3 249 33.7
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 4.5e-21 105.9 214 35.0
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 4.5e-21 105.9 208 37.0
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 1.3e-20 104.4 198 33.8
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 2.9e-20 103.2 220 33.6
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 8.5e-20 101.7 228 34.6
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 1.4e-19 100.9 228 33.8
Mapoly0007s0267 Marchantia polymorpha HOM05D005854 ORTHO05D007175 5.5e-19 99.0 147 38.8
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 1.8e-17 94.0 219 36.1
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 5.2e-17 92.4 235 34.0
Prupe.6G341300 Prunus persica HOM05D005854 ORTHO05D007175 1.1e-16 91.3 93 51.6
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 3.3e-16 89.7 180 33.9
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 5.7e-16 89.0 198 32.3
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 7.4e-16 88.6 197 33.0
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 1.7e-15 87.4 193 33.7
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 2.8e-15 86.7 220 32.7
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 2.8e-15 86.7 220 32.7
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 2.8e-15 86.7 198 31.3
CBR_g40874 Chara braunii HOM05D005854 ORTHO05D007175 8.2e-15 85.1 91 50.5
Sp7g19220 Schrenkiella parvula HOM05D005854 ORTHO05D007175 9.1e-14 81.6 93 48.4
TAR369G1106 Trochodendron aralioides HOM05D005854 ORTHO05D007175 2.3e-09 67.0 75 46.7
MD12G1238400 Malus domestica HOM05D005854 ORTHO05D007175 3.3e-08 63.2 93 43.0
Actinidia20188 Actinidia chinensis HOM05D005854 ORTHO05D007175 5.7e-08 62.4 93 43.0
Lsat_1_v5_gn_3_52500 Lactuca sativa HOM05D005854 ORTHO05D007175 7.5e-08 62.0 79 45.6
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 2.4e-06 57.0 154 29.2
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 5.3e-06 55.8 139 30.2


User provided reference genes

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