Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_2800 Physcomitrium patens HOM05D003977 ORTHO05D004536 0.0e+00 2115.9 1069 100.0
Pp3c9_2440 Physcomitrium patens HOM05D003977 ORTHO05D004536 0.0e+00 1855.1 1072 87.4
Mapoly0131s0020 Marchantia polymorpha HOM05D003977 ORTHO05D004536 6.2e-285 984.6 983 55.4
AagrBONN_evm.TU.Sc2ySwM_362.2961 Anthoceros agrestis HOM05D003977 ORTHO05D004536 3.9e-279 965.3 1031 52.8
SEGI_35648 Sequoiadendron giganteum HOM05D003977 ORTHO05D004536 7.6e-267 924.5 1001 50.8
ATR0582G127 Amborella trichopoda HOM05D003977 ORTHO05D004536 1.5e-259 900.2 966 51.3
THA.LOC104799327 Tarenaya hassleriana HOM05D003977 ORTHO05D004536 1.2e-256 890.6 975 50.1
MD07G1045800 Malus domestica HOM05D003977 ORTHO05D004536 3.9e-255 885.6 976 50.6
ClCG05G026990 Citrullus lanatus HOM05D003977 ORTHO05D004536 5.1e-255 885.2 972 51.1
MELO3C012492.2 Cucumis melo HOM05D003977 ORTHO05D004536 8.7e-255 884.4 999 49.8
Prupe.2G042800 Prunus persica HOM05D003977 ORTHO05D004536 8.7e-255 884.4 972 51.1
Dinv14623 Davidia involucrata HOM05D003977 ORTHO05D004536 1.1e-254 884.0 974 50.5
RcHm_v2.0_Chr1g0326641 Rosa chinensis HOM05D003977 ORTHO05D004536 4.3e-254 882.1 986 50.4
Sed0027944 Sechium edule HOM05D003977 ORTHO05D004536 4.3e-254 882.1 970 50.7
CsaV3_5G036930 Cucumis sativus L. HOM05D003977 ORTHO05D004536 4.8e-253 878.6 973 50.6
Rhsim12G0015900 Rhododendron simsii HOM05D003977 ORTHO05D004536 6.2e-253 878.2 976 50.5
Dinv06987 Davidia involucrata HOM05D003977 ORTHO05D004536 1.4e-252 877.1 974 50.5
TAR622G1067 Trochodendron aralioides HOM05D003977 ORTHO05D004536 1.4e-252 877.1 990 50.5
Nn4g22094 Nelumbo nucifera HOM05D003977 ORTHO05D004536 1.8e-252 876.7 973 49.9
MD02G1277700 Malus domestica HOM05D003977 ORTHO05D004536 5.3e-252 875.2 974 50.8
Nn3g16238 Nelumbo nucifera HOM05D003977 ORTHO05D004536 1.5e-251 873.6 975 49.6
GSVIVG01035560001 Vitis vinifera HOM05D003977 ORTHO05D004536 5.8e-251 871.7 971 49.8
Cfa010949 Carpinus fangiana HOM05D003977 ORTHO05D004536 7.6e-251 871.3 976 50.5
Ciclev10000128m.g Citrus clementina HOM05D003977 ORTHO05D004536 9.9e-251 870.9 989 49.6
C05p55510 Brassica napus HOM05D003977 ORTHO05D004536 2.2e-250 869.8 967 51.0
Atru.chr12.1306 Acer truncatum HOM05D003977 ORTHO05D004536 1.1e-249 867.5 975 50.4
Carub.0003s1164 Capsella rubella HOM05D003977 ORTHO05D004536 1.1e-249 867.5 969 49.9
THA.LOC104826752 Tarenaya hassleriana HOM05D003977 ORTHO05D004536 1.1e-249 867.5 978 49.9
BolC5t34217H Brassica oleracea HOM05D003977 ORTHO05D004536 1.4e-249 867.1 966 50.4
Aa31LG7G12510 Aethionema arabicum HOM05D003977 ORTHO05D004536 3.2e-249 865.9 974 49.9
A05p37080 Brassica napus HOM05D003977 ORTHO05D004536 4.2e-249 865.5 968 50.4
Lalb_Chr03g0032201 Lupinus albus HOM05D003977 ORTHO05D004536 4.2e-249 865.5 992 48.8
FvH4_7g03720 Fragaria vesca HOM05D003977 ORTHO05D004536 7.1e-249 864.8 975 50.1
Glyma.13G192400 Glycine max HOM05D003977 ORTHO05D004536 7.1e-249 864.8 1019 48.2
Sp3g10500 Schrenkiella parvula HOM05D003977 ORTHO05D004536 7.1e-249 864.8 969 49.3
DCAR_004259 Daucus carota HOM05D003977 ORTHO05D004536 1.6e-248 863.6 984 49.9
DCAR_004260 Daucus carota HOM05D003977 ORTHO05D004536 1.6e-248 863.6 984 49.9
Sed0009106 Sechium edule HOM05D003977 ORTHO05D004536 1.6e-248 863.6 979 49.5
Ca_23978_v3 Cicer arietinum L. HOM05D003977 ORTHO05D004536 2.7e-248 862.8 1009 48.7
AL3G23940 Arabidopsis lyrata HOM05D003977 ORTHO05D004536 3.5e-248 862.4 969 49.5
CSS0046878 Camellia sinensis var. sinensis HOM05D003977 ORTHO05D004536 3.5e-248 862.4 971 49.2
Duzib114G0684 Durio zibethinus HOM05D003977 ORTHO05D004536 3.5e-248 862.4 981 49.3
MBI11_g07996_MAGBIO Magnolia biondii HOM05D003977 ORTHO05D004536 4.6e-248 862.1 970 50.3
Potri.001G031400 Populus trichocarpa HOM05D003977 ORTHO05D004536 6.0e-248 861.7 989 48.9
Glyma.15G230300 Glycine max HOM05D003977 ORTHO05D004536 7.9e-248 861.3 987 49.0
Gohir.A05G399500 Gossypium hirsutum HOM05D003977 ORTHO05D004536 7.9e-248 861.3 991 48.3
Lj1g0022785 Lotus japonicus HOM05D003977 ORTHO05D004536 7.9e-248 861.3 973 49.8
Cc11_g14880 Coffea canephora HOM05D003977 ORTHO05D004536 1.0e-247 860.9 971 49.1
Duzib106G1228 Durio zibethinus HOM05D003977 ORTHO05D004536 1.0e-247 860.9 990 48.6
Gohir.D04G016400 Gossypium hirsutum HOM05D003977 ORTHO05D004536 2.3e-247 859.8 990 48.4
CiPaw.06G056400 Carya illinoinensis HOM05D003977 ORTHO05D004536 3.0e-247 859.4 983 50.1
Aqoxy5G03020 Aquilegia oxysepala HOM05D003977 ORTHO05D004536 8.7e-247 857.8 986 49.3
Haze_02995 Corylus avellana HOM05D003977 ORTHO05D004536 1.1e-246 857.4 986 50.0
vmacro01007 Vaccinium macrocarpon HOM05D003977 ORTHO05D004536 1.1e-246 857.4 1000 48.6
FAN03G2084 Fragaria x ananassa HOM05D003977 ORTHO05D004536 1.5e-246 857.1 979 49.8
FAN06G3123 Fragaria x ananassa HOM05D003977 ORTHO05D004536 1.5e-246 857.1 974 49.9
Prupe.8G086800 Prunus persica HOM05D003977 ORTHO05D004536 1.5e-246 857.1 972 49.5
Gorai.012G019100 Gossypium raimondii HOM05D003977 ORTHO05D004536 1.9e-246 856.7 990 48.4
AT3G12280 Arabidopsis thaliana HOM05D003977 ORTHO05D004536 3.3e-246 855.9 969 49.6
BcaB04g18687 Brassica carinata HOM05D003977 ORTHO05D004536 7.4e-246 854.7 975 49.0
Gorai.012G019200 Gossypium raimondii HOM05D003977 ORTHO05D004536 7.4e-246 854.7 977 48.9
Gohir.D04G016500 Gossypium hirsutum HOM05D003977 ORTHO05D004536 9.6e-246 854.4 977 48.7
Lalb_Chr19g0132941 Lupinus albus HOM05D003977 ORTHO05D004536 1.6e-245 853.6 992 48.8
QL93p0049_0031 Quercus lobata HOM05D003977 ORTHO05D004536 1.6e-245 853.6 975 48.9
Sabra01G0022500 Salix brachista HOM05D003977 ORTHO05D004536 1.6e-245 853.6 1031 46.8
QL04p021130 Quercus lobata HOM05D003977 ORTHO05D004536 2.8e-245 852.8 975 48.9
CARHR086830 Cardamine hirsuta HOM05D003977 ORTHO05D004536 6.2e-245 851.7 969 48.8
FAN01G0005 Fragaria x ananassa HOM05D003977 ORTHO05D004536 6.2e-245 851.7 981 49.6
Sopen09g034250 Solanum pennellii HOM05D003977 ORTHO05D004536 3.1e-244 849.4 976 49.1
C01p53050 Brassica napus HOM05D003977 ORTHO05D004536 4.0e-244 849.0 964 49.7
Solyc09g091280.4 Solanum lycopersicum HOM05D003977 ORTHO05D004536 5.3e-244 848.6 976 49.1
PGSC0003DMG400011581 Solanum tuberosum HOM05D003977 ORTHO05D004536 1.2e-243 847.4 976 48.8
Glyma.04G192200 Glycine max HOM05D003977 ORTHO05D004536 2.0e-243 846.7 1019 47.3
TPR.G8543 Trifolium pratense HOM05D003977 ORTHO05D004536 3.4e-243 845.9 989 48.5
arahy.Tifrunner.gnm1.ann1.I0XR4S Arachis hypogaea HOM05D003977 ORTHO05D004536 4.5e-243 845.5 1009 48.3
Thecc.10G142800 Theobroma cacao HOM05D003977 ORTHO05D004536 7.6e-243 844.7 973 48.8
VMungo1127G0455 Vigna mungo HOM05D003977 ORTHO05D004536 7.6e-243 844.7 984 48.7
Thhalv10019977m.g Eutrema salsugineum HOM05D003977 ORTHO05D004536 9.9e-243 844.3 969 49.0
CiPaw.14G009300 Carya illinoinensis HOM05D003977 ORTHO05D004536 1.3e-242 844.0 978 49.1
BcaC09g48227 Brassica carinata HOM05D003977 ORTHO05D004536 1.7e-242 843.6 968 48.9
COL.COLO4_20737 Corchorus olitorius HOM05D003977 ORTHO05D004536 1.7e-242 843.6 992 48.4
CAN.G1588.14 Capsicum annuum HOM05D003977 ORTHO05D004536 3.8e-242 842.4 980 48.7
BolC1t05248H Brassica oleracea HOM05D003977 ORTHO05D004536 6.4e-242 841.6 971 49.0
PGR031G0564 Punica granatum HOM05D003977 ORTHO05D004536 6.4e-242 841.6 976 48.8
SEGI_33786 Sequoiadendron giganteum HOM05D003977 ORTHO05D004536 8.4e-242 841.3 902 50.9
Sc02g0008490 Simmondsia chinensis HOM05D003977 ORTHO05D004536 1.4e-241 840.5 994 48.3
HanXRQChr06g0175421 Helianthus annuus HOM05D003977 ORTHO05D004536 1.9e-241 840.1 988 47.2
PSO478G2410 Papaver somniferum HOM05D003977 ORTHO05D004536 1.9e-241 840.1 982 48.9
Medtr8g040560 Medicago truncatula HOM05D003977 ORTHO05D004536 3.2e-241 839.3 995 48.0
Phvul.011G201200 Phaseolus vulgaris HOM05D003977 ORTHO05D004536 3.2e-241 839.3 975 48.7
arahy.Tifrunner.gnm1.ann1.Q9GEU7 Arachis hypogaea HOM05D003977 ORTHO05D004536 9.3e-241 837.8 999 48.3
DCAR_008196 Daucus carota HOM05D003977 ORTHO05D004536 1.2e-240 837.4 974 48.6
PSO017G2490 Papaver somniferum HOM05D003977 ORTHO05D004536 1.6e-240 837.0 982 48.8
Psat4g145000 Pisum sativum HOM05D003977 ORTHO05D004536 3.9e-239 832.4 986 48.5
AUR62035738 Chenopodium quinoa HOM05D003977 ORTHO05D004536 8.7e-239 831.2 984 48.3
AUR62033843 Chenopodium quinoa HOM05D003977 ORTHO05D004536 1.5e-238 830.5 990 48.1
CANSAT56G0684 Cannabis sativa HOM05D003977 ORTHO05D004536 2.5e-238 829.7 994 47.5
Zm00001eb037120 Zea mays HOM05D003977 ORTHO05D004536 2.5e-238 829.7 970 48.2
Lj3g0027102 Lotus japonicus HOM05D003977 ORTHO05D004536 5.6e-238 828.6 1018 47.7
BolC3t16833H Brassica oleracea HOM05D003977 ORTHO05D004536 1.3e-237 827.4 971 48.0
C03p45560 Brassica napus HOM05D003977 ORTHO05D004536 1.6e-237 827.0 974 47.8
TWI38G1846 Tripterygium wilfordii HOM05D003977 ORTHO05D004536 2.1e-237 826.6 977 47.7
A03p37570 Brassica napus HOM05D003977 ORTHO05D004536 2.8e-237 826.2 969 47.7
SalBow2G0230 Salvia bowleyana HOM05D003977 ORTHO05D004536 8.2e-237 824.7 968 48.3
Peaxi162Scf00047g01540 Petunia axillaris HOM05D003977 ORTHO05D004536 1.1e-236 824.3 977 48.0
HPP92_000321 Vanilla planifolia HOM05D003977 ORTHO05D004536 1.4e-236 823.9 981 48.1
FAN10G3794 Fragaria x ananassa HOM05D003977 ORTHO05D004536 2.4e-236 823.2 974 49.0
Gorai.009G299000 Gossypium raimondii HOM05D003977 ORTHO05D004536 1.2e-235 820.8 999 47.7
TWI15G1223 Tripterygium wilfordii HOM05D003977 ORTHO05D004536 1.2e-235 820.8 978 47.4
BraA03t12911Z Brassica rapa HOM05D003977 ORTHO05D004536 1.5e-235 820.5 989 47.2
Os08g0538700 Oryza sativa ssp. japonica HOM05D003977 ORTHO05D004536 4.9e-234 815.5 967 47.3
ECA246G4717 Erigeron canadensis HOM05D003977 ORTHO05D004536 1.2e-232 810.8 981 46.0
EL10Ac1g02273 Beta vulgaris HOM05D003977 ORTHO05D004536 1.6e-232 810.4 1028 47.5
SGA_v2.0_scaffold81G25979 Striga asiatica HOM05D003977 ORTHO05D004536 2.1e-232 810.1 992 47.5
MSTRG.444 Avicennia marina HOM05D003977 ORTHO05D004536 7.9e-232 808.1 972 48.3
AUR62041503 Chenopodium quinoa HOM05D003977 ORTHO05D004536 1.0e-231 807.7 1005 47.1
TAR629G1670 Trochodendron aralioides HOM05D003977 ORTHO05D004536 1.8e-231 807.0 938 48.8
Eucgr.G03211 Eucalyptus grandis HOM05D003977 ORTHO05D004536 2.3e-231 806.6 985 47.6
Migut.K01127 Erythranthe guttata HOM05D003977 ORTHO05D004536 3.0e-231 806.2 972 47.6
Gohir.A05G283400 Gossypium hirsutum HOM05D003977 ORTHO05D004536 3.3e-230 802.7 972 47.5
CDE09G1395 Ceratophyllum demersum HOM05D003977 ORTHO05D004536 8.2e-229 798.1 978 48.0
Gohir.D05G284400 Gossypium hirsutum HOM05D003977 ORTHO05D004536 4.1e-228 795.8 959 48.4
Lsat_1_v5_gn_3_33021 Lactuca sativa HOM05D003977 ORTHO05D004536 1.8e-223 780.4 966 46.6
Hund13302 Selenicereus undatus HOM05D003977 ORTHO05D004536 3.0e-223 779.6 995 46.3
SMO134G0004 Selaginella moellendorffii HOM05D003977 ORTHO05D004536 1.5e-222 777.3 919 48.9
PSO478G5179 Papaver somniferum HOM05D003977 ORTHO05D004536 9.7e-222 774.6 982 46.3
Gohir.A05G399400 Gossypium hirsutum HOM05D003977 ORTHO05D004536 4.8e-221 772.3 878 49.5
Manes.16G045800 Manihot esculenta HOM05D003977 ORTHO05D004536 5.5e-217 758.8 869 50.2
Manes.03G097800 Manihot esculenta HOM05D003977 ORTHO05D004536 2.6e-211 740.0 873 49.3
unitig_26.g10435 Utricularia gibba HOM05D003977 ORTHO05D004536 9.4e-209 731.5 1016 44.0
Ah.05g166690 Amaranthus hybridus HOM05D003977 ORTHO05D004536 3.7e-205 719.5 885 47.2
BcaC01g04055 Brassica carinata HOM05D003977 ORTHO05D004536 2.6e-203 713.4 874 47.0
Nitab4.5_0002182g0050 Nicotiana tabacum HOM05D003977 ORTHO05D004536 2.8e-197 693.3 998 43.8
Zm00001eb198220 Zea mays HOM05D003977 ORTHO05D004536 2.8e-197 693.3 849 46.5
Nitab4.5_0008702g0020 Nicotiana tabacum HOM05D003977 ORTHO05D004536 2.9e-194 683.3 1006 42.4
CDE02G2393 Ceratophyllum demersum HOM05D003977 ORTHO05D004536 3.5e-187 659.8 760 51.2
Os11g0533500 Oryza sativa ssp. japonica HOM05D003977 ORTHO05D004536 3.3e-185 653.3 977 41.2
SMO141G0281 Selaginella moellendorffii HOM05D003977 ORTHO05D004536 2.6e-182 643.7 961 40.9
Pp3c19_9580 Physcomitrium patens HOM05D003977 ORTHO05D004536 1.5e-174 617.8 626 56.1
Zm00001eb197990 Zea mays HOM05D003977 ORTHO05D004536 1.8e-167 594.3 795 46.7
CBR_g45825 Chara braunii HOM05D003977 ORTHO05D004536 8.3e-165 585.5 1095 37.2
CSS0026343 Camellia sinensis var. sinensis HOM05D003977 ORTHO05D004536 5.1e-162 576.2 960 40.2
Zm00001eb113470 Zea mays HOM05D003977 ORTHO05D004536 7.3e-161 572.4 791 44.9
MBI11_g02479_MAGBIO Magnolia biondii HOM05D003977 ORTHO05D004536 6.8e-159 565.8 728 47.1
Lj3A1077G55 Lonicera japonica HOM05D003977 ORTHO05D004536 1.9e-145 521.2 661 48.3
Cpa.g.sc169.40 Carica papaya HOM05D003977 ORTHO05D004536 1.3e-144 518.5 970 36.3
unitig_22.g6370 Utricularia gibba HOM05D003977 ORTHO05D004536 2.1e-144 517.7 634 47.2
HPP92_009801 Vanilla planifolia HOM05D002468 ORTHO05D005371 7.4e-121 439.5 801 39.0
GSVIVG01032958001 Vitis vinifera HOM05D003977 ORTHO05D004536 6.2e-120 436.4 573 46.1
Ciclev10003102m.g Citrus clementina HOM05D003977 ORTHO05D004536 3.7e-104 384.0 681 40.4
Manes.11G074000 Manihot esculenta HOM05D003977 ORTHO05D004536 4.5e-102 377.1 628 39.6
Ciclev10014630m.g Citrus clementina HOM05D003977 ORTHO05D004536 5.9e-94 350.1 589 39.2
BraA05t22505Z Brassica rapa HOM05D003977 ORTHO05D004536 4.4e-81 307.4 381 44.4
Atru.chr6.2718 Acer truncatum HOM05D003977 ORTHO05D004536 1.2e-78 299.3 607 35.4
PRCOL_00001859 Prasinoderma coloniale HOM05D003977 ORTHO05D004536 1.5e-76 292.4 1048 28.3
SEGI_04896 Sequoiadendron giganteum HOM05D003977 ORTHO05D004536 2.2e-72 278.5 283 53.0
QL04p021333 Quercus lobata HOM05D003977 ORTHO05D004536 2.3e-69 268.5 551 34.3
Pp3c19_9596 Physcomitrium patens HOM05D003977 ORTHO05D004536 3.3e-68 264.6 283 50.9
Cre06.g255450 Chlamydomonas reinhardtii HOM05D003977 ORTHO05D004536 2.7e-54 218.4 925 25.5
MCO08G295 Micromonas commoda HOM05D003977 ORTHO05D004536 3.5e-54 218.0 518 31.7
Pp3c19_9550 Physcomitrium patens HOM05D003977 ORTHO05D004536 2.1e-51 208.8 180 57.2
Hma1.2p1_0073F.1_g038600 Hydrangea macrophylla HOM05D003977 ORTHO05D004536 6.2e-51 207.2 225 49.8
unitig_22.g6371 Utricularia gibba HOM05D003977 ORTHO05D004536 5.4e-47 194.1 226 49.1
Hma1.2p1_0164F.1_g073080 Hydrangea macrophylla HOM05D003977 ORTHO05D004536 3.9e-45 188.0 186 52.7
HanXRQChr04g0106401 Helianthus annuus HOM05D003977 ORTHO05D004536 6.8e-42 177.2 250 40.4
CDE02G2628 Ceratophyllum demersum HOM05D003977 ORTHO05D004536 3.0e-37 161.8 202 40.1
Oeu034276.1 Olea europaea HOM05D003977 ORTHO05D004536 3.1e-26 125.2 222 37.8
Hma1.2p1_0468F.1_g158780 Hydrangea macrophylla HOM05D003977 ORTHO05D004536 6.4e-24 117.5 128 44.5
SalBow1G6973 Salvia bowleyana HOM05D003977 ORTHO05D004536 2.1e-22 112.5 131 44.3
SalBow2G2207 Salvia bowleyana HOM05D003977 ORTHO05D004536 1.2e-17 96.7 118 42.4
C02p49640 Brassica napus HOM05D003977 ORTHO05D004536 8.4e-16 90.5 156 36.5
BolC2t11042H Brassica oleracea HOM05D003977 ORTHO05D004536 4.2e-15 88.2 175 34.9
Hma1.2p1_0112F.1_g054450 Hydrangea macrophylla HOM05D000462 ORTHO05D004536 3.3e-12 78.6 88 42.0
Hma1.2p1_1036F.1_g250510 Hydrangea macrophylla HOM05D000462 ORTHO05D004536 4.3e-12 78.2 88 42.0
Rhsim02G0185900 Rhododendron simsii HOM05D016728 ORTHO05D340288 7.4e-12 77.4 62 62.9


User provided reference genes

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