Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_1090 Physcomitrium patens HOM05D004859 ORTHO05D005807 3.8e-54 214.5 105 100.0
Pp3c9_1130 Physcomitrium patens HOM05D004859 ORTHO05D005807 1.2e-52 209.5 105 97.1
Pp3c26_1250 Physcomitrium patens HOM05D004859 ORTHO05D005807 5.9e-47 190.7 106 86.8
Mapoly0153s0037 Marchantia polymorpha HOM05D004859 ORTHO05D005807 2.5e-42 175.3 107 81.3
Lalb_Chr01g0020391 Lupinus albus HOM05D004859 ORTHO05D005807 1.1e-40 169.9 106 76.4
CSS0045397 Camellia sinensis var. sinensis HOM05D004859 ORTHO05D005807 1.8e-40 169.1 107 73.8
Glyma.09G250600 Glycine max HOM05D004859 ORTHO05D005807 2.4e-40 168.7 106 76.4
Glyma.18G241900 Glycine max HOM05D004859 ORTHO05D005807 3.1e-40 168.3 105 75.2
unitig_749.g13492 Utricularia gibba HOM05D004859 ORTHO05D005807 3.1e-40 168.3 105 75.2
Duzib177G0866 Durio zibethinus HOM05D004859 ORTHO05D005807 4.1e-40 167.9 105 75.2
Sc16g0010390 Simmondsia chinensis HOM05D004859 ORTHO05D005807 4.1e-40 167.9 105 75.2
VMungo1383G1359 Vigna mungo HOM05D004859 ORTHO05D005807 4.1e-40 167.9 105 74.3
Gohir.A13G154200 Gossypium hirsutum HOM05D004859 ORTHO05D005807 9.1e-40 166.8 105 74.3
Gohir.D13G158900 Gossypium hirsutum HOM05D004859 ORTHO05D005807 9.1e-40 166.8 105 74.3
Gorai.013G179600 Gossypium raimondii HOM05D004859 ORTHO05D005807 9.1e-40 166.8 105 74.3
CAN.G217.12 Capsicum annuum HOM05D004859 ORTHO05D005807 1.2e-39 166.4 106 75.5
Sed0011478 Sechium edule HOM05D004859 ORTHO05D005807 1.2e-39 166.4 106 76.4
TWI18G1000 Tripterygium wilfordii HOM05D004859 ORTHO05D005807 1.2e-39 166.4 105 75.2
Ah.06g195490 Amaranthus hybridus HOM05D004859 ORTHO05D005807 2.0e-39 165.6 105 74.3
MELO3C010059.2 Cucumis melo HOM05D004859 ORTHO05D005807 2.0e-39 165.6 106 77.4
PGR031G2676 Punica granatum HOM05D004859 ORTHO05D005807 2.6e-39 165.2 105 71.4
GSVIVG01019111001 Vitis vinifera HOM05D004859 ORTHO05D005807 2.6e-39 165.2 104 74.0
ClCG03G010710 Citrullus lanatus HOM05D004859 ORTHO05D005807 3.4e-39 164.9 106 75.5
Lj1g0018632 Lotus japonicus HOM05D004859 ORTHO05D005807 3.4e-39 164.9 105 74.3
Oeu020252.1 Olea europaea HOM05D004859 ORTHO05D005807 3.4e-39 164.9 105 72.4
CANSAT35G0417 Cannabis sativa HOM05D004859 ORTHO05D005807 4.5e-39 164.5 106 71.7
CANSAT54G1839 Cannabis sativa HOM05D004859 ORTHO05D005807 4.5e-39 164.5 105 74.3
Cpa.g.sc39.7 Carica papaya HOM05D004859 ORTHO05D005807 4.5e-39 164.5 105 72.4
Ciclev10013411m.g Citrus clementina HOM05D004859 ORTHO05D005807 4.5e-39 164.5 106 73.6
Gohir.A05G391600 Gossypium hirsutum HOM05D004859 ORTHO05D005807 4.5e-39 164.5 105 74.3
AUR62000312 Chenopodium quinoa HOM05D004859 ORTHO05D005807 5.9e-39 164.1 105 72.4
Lalb_Chr03g0038491 Lupinus albus HOM05D004859 ORTHO05D005807 5.9e-39 164.1 106 72.6
Manes.12G005900 Manihot esculenta HOM05D004859 ORTHO05D005807 5.9e-39 164.1 105 73.3
Rhsim09G0129900 Rhododendron simsii HOM05D004859 ORTHO05D005807 5.9e-39 164.1 105 70.5
Ca_07986_v3 Cicer arietinum L. HOM05D004859 ORTHO05D005807 7.7e-39 163.7 105 72.4
Gohir.D04G025700 Gossypium hirsutum HOM05D004859 ORTHO05D005807 7.7e-39 163.7 105 74.3
Gorai.012G028300 Gossypium raimondii HOM05D004859 ORTHO05D005807 7.7e-39 163.7 105 74.3
Sopen04g025250 Solanum pennellii HOM05D004859 ORTHO05D005807 7.7e-39 163.7 106 73.6
CDE12G0839 Ceratophyllum demersum HOM05D004859 ORTHO05D005807 1.0e-38 163.3 105 73.3
Solyc04g056350.1 Solanum lycopersicum HOM05D004859 ORTHO05D005807 1.0e-38 163.3 106 72.6
Zm00001eb272650 Zea mays HOM05D004859 ORTHO05D005807 1.0e-38 163.3 109 73.4
Migut.F02136 Erythranthe guttata HOM05D004859 ORTHO05D005807 1.3e-38 162.9 105 70.5
MD04G1244600 Malus domestica HOM05D004859 ORTHO05D005807 1.3e-38 162.9 112 70.5
unitig_26.g9580 Utricularia gibba HOM05D000798 ORTHO05D000659 1.3e-38 162.9 106 74.5
Oeu062049.1 Olea europaea HOM05D004859 ORTHO05D005807 1.7e-38 162.5 105 70.5
RcHm_v2.0_Chr3g0447891 Rosa chinensis HOM05D004859 ORTHO05D005807 1.7e-38 162.5 106 73.6
THA.LOC104802953 Tarenaya hassleriana HOM05D004859 ORTHO05D005807 1.7e-38 162.5 105 71.4
Gorai.004G261900 Gossypium raimondii HOM05D004859 ORTHO05D005807 2.2e-38 162.2 105 72.4
Nn7g37400 Nelumbo nucifera HOM05D004859 ORTHO05D005807 2.2e-38 162.2 105 73.3
Prupe.6G361200 Prunus persica HOM05D004859 ORTHO05D005807 2.2e-38 162.2 116 68.1
SEGI_19955 Sequoiadendron giganteum HOM05D004859 ORTHO05D005807 2.2e-38 162.2 105 72.4
Duzib128G0817 Durio zibethinus HOM05D004859 ORTHO05D005807 2.9e-38 161.8 105 71.4
Gohir.D08G245400 Gossypium hirsutum HOM05D004859 ORTHO05D005807 2.9e-38 161.8 105 72.4
MD12G1260500 Malus domestica HOM05D004859 ORTHO05D005807 2.9e-38 161.8 111 70.3
Potri.013G086400 Populus trichocarpa HOM05D004859 ORTHO05D005807 2.9e-38 161.8 105 71.4
Sc06g0005050 Simmondsia chinensis HOM05D004859 ORTHO05D005807 2.9e-38 161.8 105 70.5
PGSC0003DMG400007259 Solanum tuberosum HOM05D004859 ORTHO05D005807 2.9e-38 161.8 106 71.7
TWI36G0708 Tripterygium wilfordii HOM05D004859 ORTHO05D005807 2.9e-38 161.8 105 70.5
CsaV3_1G044540 Cucumis sativus L. HOM05D004859 ORTHO05D005807 3.8e-38 161.4 106 75.5
Nitab4.5_0001435g0020 Nicotiana tabacum HOM05D004859 ORTHO05D005807 3.8e-38 161.4 107 71.0
CSS0011817 Camellia sinensis var. sinensis HOM05D004859 ORTHO05D005807 5.0e-38 161.0 104 72.1
CiPaw.07G080000 Carya illinoinensis HOM05D004859 ORTHO05D005807 5.0e-38 161.0 105 71.4
Nitab4.5_0000083g0160 Nicotiana tabacum HOM05D004859 ORTHO05D005807 5.0e-38 161.0 107 71.0
Hma1.2p1_0171F.1_g075510 Hydrangea macrophylla HOM05D004859 ORTHO05D005807 6.5e-38 160.6 105 73.3
Cfa006265 Carpinus fangiana HOM05D004859 ORTHO05D005807 8.5e-38 160.2 105 73.3
SalBow6G1022 Salvia bowleyana HOM05D004859 ORTHO05D005807 8.5e-38 160.2 105 72.4
SMO361G0285 Selaginella moellendorffii HOM05D004859 ORTHO05D005807 8.5e-38 160.2 106 74.5
ECA238G2179 Erigeron canadensis HOM05D004859 ORTHO05D005807 1.1e-37 159.8 106 72.6
QL01p048380 Quercus lobata HOM05D004859 ORTHO05D005807 1.1e-37 159.8 104 72.1
ATR0568G125 Amborella trichopoda HOM05D004859 ORTHO05D005807 1.4e-37 159.5 107 70.1
BcaC05g30510 Brassica carinata HOM05D004859 ORTHO05D005807 1.4e-37 159.5 106 71.7
C09p75910 Brassica napus HOM05D004859 ORTHO05D005807 1.4e-37 159.5 106 71.7
Manes.13G005600 Manihot esculenta HOM05D004859 ORTHO05D005807 1.4e-37 159.5 105 73.3
Medtr7g079990 Medicago truncatula HOM05D004859 ORTHO05D005807 1.4e-37 159.5 107 73.8
TPR.G30708 Trifolium pratense HOM05D004859 ORTHO05D005807 1.4e-37 159.5 105 70.5
COL.COLO4_19821 Corchorus olitorius HOM05D004859 ORTHO05D005807 1.9e-37 159.1 107 71.0
MBI18_g38869_MAGBIO Magnolia biondii HOM05D004859 ORTHO05D005807 1.9e-37 159.1 105 72.4
Sp3g01820 Schrenkiella parvula HOM05D004859 ORTHO05D005807 1.9e-37 159.1 106 72.6
Zm00001eb227470 Zea mays HOM05D004859 ORTHO05D005807 1.9e-37 159.1 119 67.2
Carub.0003s0189 Capsella rubella HOM05D004859 ORTHO05D005807 2.5e-37 158.7 106 72.6
Cc09_g03620 Coffea canephora HOM05D004859 ORTHO05D005807 2.5e-37 158.7 111 70.3
Psat3g138280 Pisum sativum HOM05D004859 ORTHO05D005807 2.5e-37 158.7 107 70.1
TAR629G2726 Trochodendron aralioides HOM05D004859 ORTHO05D005807 2.5e-37 158.7 105 69.5
HanXRQChr11g0333601 Helianthus annuus HOM05D004859 ORTHO05D005807 3.2e-37 158.3 106 72.6
THA.LOC104827174 Tarenaya hassleriana HOM05D004859 ORTHO05D005807 3.2e-37 158.3 105 71.4
BcaC05g30507 Brassica carinata HOM05D004859 ORTHO05D005807 4.2e-37 157.9 106 71.7
Phvul.008G054200 Phaseolus vulgaris HOM05D004859 ORTHO05D005807 4.2e-37 157.9 109 70.6
Atru.chr12.1788 Acer truncatum HOM05D004859 ORTHO05D005807 5.5e-37 157.5 107 72.0
EL10Ac4g09966 Beta vulgaris HOM05D004859 ORTHO05D005807 5.5e-37 157.5 100 71.0
AUR62006657 Chenopodium quinoa HOM05D004859 ORTHO05D005807 5.5e-37 157.5 105 71.4
SHI13720 Sapria himalayana HOM05D004859 ORTHO05D005807 5.5e-37 157.5 104 72.1
Aqoxy7G00303 Aquilegia oxysepala HOM05D004859 ORTHO05D005807 7.2e-37 157.1 107 69.2
FvH4_6g00510 Fragaria vesca HOM05D004859 ORTHO05D005807 7.2e-37 157.1 108 70.4
Os06g0708600 Oryza sativa ssp. japonica HOM05D004859 ORTHO05D005807 7.2e-37 157.1 115 70.4
AL3G12200 Arabidopsis lyrata HOM05D004859 ORTHO05D005807 9.4e-37 156.8 106 72.6
ECA233G5366 Erigeron canadensis HOM05D004859 ORTHO05D005807 9.4e-37 156.8 106 71.7
FAN09G3430 Fragaria x ananassa HOM05D004859 ORTHO05D005807 9.4e-37 156.8 107 70.1
FAN14G1059 Fragaria x ananassa HOM05D004859 ORTHO05D005807 9.4e-37 156.8 107 70.1
Aa31LG5G13260 Aethionema arabicum HOM05D004859 ORTHO05D005807 1.2e-36 156.4 107 72.9
Peaxi162Scf00344g00092 Petunia axillaris HOM05D004859 ORTHO05D005807 1.2e-36 156.4 107 69.2
CARHR076800 Cardamine hirsuta HOM05D004859 ORTHO05D005807 1.6e-36 156.0 106 70.8
Haze_04552 Corylus avellana HOM05D004859 ORTHO05D005807 1.6e-36 156.0 105 71.4
Gohir.A08G225000 Gossypium hirsutum HOM05D004859 ORTHO05D005807 1.6e-36 156.0 102 69.6
Lsat_1_v5_gn_2_18260 Lactuca sativa HOM05D004859 ORTHO05D005807 1.6e-36 156.0 107 70.1
FAN05G4796 Fragaria x ananassa HOM05D004859 ORTHO05D005807 2.1e-36 155.6 106 71.7
Thecc.05G199300 Theobroma cacao HOM05D004859 ORTHO05D005807 2.1e-36 155.6 105 70.5
BolC5t35066H Brassica oleracea HOM05D004859 ORTHO05D005807 2.7e-36 155.2 106 70.8
Eucgr.H01388 Eucalyptus grandis HOM05D004859 ORTHO05D005807 2.7e-36 155.2 108 70.4
Potri.019G053500 Populus trichocarpa HOM05D004859 ORTHO05D005807 3.6e-36 154.8 103 70.9
HPP92_025926 Vanilla planifolia HOM05D004859 ORTHO05D005807 4.7e-36 154.5 103 68.9
AT3G02790 Arabidopsis thaliana HOM05D004859 ORTHO05D005807 7.9e-36 153.7 106 70.8
Actinidia38902 Actinidia chinensis HOM05D004859 ORTHO05D005807 1.0e-35 153.3 99 72.7
DCAR_029983 Daucus carota HOM05D004859 ORTHO05D005807 1.4e-35 152.9 106 70.8
DCAR_024584 Daucus carota HOM05D004859 ORTHO05D005807 3.0e-35 151.8 107 68.2
PSO675G0300 Papaver somniferum HOM05D004859 ORTHO05D005807 6.7e-35 150.6 107 68.2
PSO675G8596 Papaver somniferum HOM05D004859 ORTHO05D005807 6.7e-35 150.6 107 68.2
HanXRQChr09g0244001 Helianthus annuus HOM05D004859 ORTHO05D005807 2.0e-34 149.1 106 67.0
A02p03550 Brassica napus HOM05D004859 ORTHO05D005807 5.7e-34 147.5 106 69.8
BraA02t05326Z Brassica rapa HOM05D004859 ORTHO05D005807 7.4e-34 147.1 106 69.8
BcaB01g04980 Brassica carinata HOM05D004859 ORTHO05D005807 9.7e-34 146.7 108 68.5
BolC3t13398H Brassica oleracea HOM05D004859 ORTHO05D005807 9.7e-34 146.7 108 68.5
A03p07800 Brassica napus HOM05D004859 ORTHO05D005807 1.3e-33 146.4 109 67.9
BraA03t10107Z Brassica rapa HOM05D004859 ORTHO05D005807 1.3e-33 146.4 109 67.9
BcaB08g36850 Brassica carinata HOM05D004859 ORTHO05D005807 1.7e-33 146.0 106 68.9
BcaC04g18876 Brassica carinata HOM05D004859 ORTHO05D005807 1.7e-33 146.0 106 68.9
A10p22730 Brassica napus HOM05D004859 ORTHO05D005807 1.7e-33 146.0 106 68.9
C09p60710 Brassica napus HOM05D004859 ORTHO05D005807 1.7e-33 146.0 106 68.9
BolC9t58902H Brassica oleracea HOM05D004859 ORTHO05D005807 1.7e-33 146.0 106 68.9
BraA10t44336Z Brassica rapa HOM05D004859 ORTHO05D005807 1.7e-33 146.0 106 68.9
Lsat_1_v5_gn_8_2360 Lactuca sativa HOM05D004859 ORTHO05D005807 1.7e-33 146.0 105 65.7
Sp6g27710 Schrenkiella parvula HOM05D004859 ORTHO05D005807 1.7e-33 146.0 106 68.9
Sabra13G0077700 Salix brachista HOM05D004859 ORTHO05D005807 2.2e-33 145.6 97 67.0
BcaC03g18492 Brassica carinata HOM05D004859 ORTHO05D005807 2.8e-33 145.2 107 70.1
Thhalv10015095m.g Eutrema salsugineum HOM05D004859 ORTHO05D005807 2.8e-33 145.2 106 67.9
CARHR196760 Cardamine hirsuta HOM05D004859 ORTHO05D005807 3.7e-33 144.8 107 70.1
Aa31LG11G13190 Aethionema arabicum HOM05D004859 ORTHO05D005807 1.1e-32 143.3 105 66.7
BolC2t06754H Brassica oleracea HOM05D004859 ORTHO05D005807 1.4e-32 142.9 106 67.9
AL6G27410 Arabidopsis lyrata HOM05D004859 ORTHO05D005807 7.0e-32 140.6 107 68.2
AT5G16470 Arabidopsis thaliana HOM05D004859 ORTHO05D005807 7.0e-32 140.6 107 68.2
Carub.0006s1467 Capsella rubella HOM05D004859 ORTHO05D005807 7.0e-32 140.6 107 68.2
VMungo0464G0653 Vigna mungo HOM05D004859 ORTHO05D005807 1.4e-24 116.3 81 65.4
Cre09.g416500 Chlamydomonas reinhardtii HOM05D004859 ORTHO05D005807 3.8e-22 108.2 103 57.3
A05p44330 Brassica napus HOM05D004859 ORTHO05D005807 5.5e-21 104.4 69 71.0
BraA06t23289Z Brassica rapa HOM05D004859 ORTHO05D005807 5.5e-21 104.4 69 71.0
RcHm_v2.0_Chr1g0316641 Rosa chinensis HOM05D004859 ORTHO05D005807 1.2e-18 96.7 72 63.9
PRCOL_00002520 Prasinoderma coloniale HOM05D004859 ORTHO05D005807 5.7e-18 94.4 82 56.1
Nn1g09361 Nelumbo nucifera HOM05D004859 ORTHO05D005807 1.1e-16 90.1 52 80.8
Nn1g01054 Nelumbo nucifera HOM05D004859 ORTHO05D005807 5.9e-15 84.3 56 71.4
BcaB08g36851 Brassica carinata HOM05D004859 ORTHO05D005807 8.5e-14 80.5 106 49.1
AUR62006656 Chenopodium quinoa HOM05D004859 ORTHO05D005807 2.5e-13 79.0 91 42.9
SHI22764 Sapria himalayana HOM05D004859 ORTHO05D005807 1.1e-08 63.5 72 47.2
Dinv29105 Davidia involucrata HOM05D004859 ORTHO05D005807 8.6e-06 53.9 28 92.9


User provided reference genes

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