Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_11410 Physcomitrium patens HOM05D006827 ORTHO05D008725 6.4e-138 494.2 272 100.0
Pp3c14_11414 Physcomitrium patens HOM05D006827 ORTHO05D008725 6.4e-138 494.2 272 100.0
Mapoly0005s0049 Marchantia polymorpha HOM05D006827 ORTHO05D008725 5.2e-39 165.6 165 51.5
Os12g0563200 Oryza sativa ssp. japonica HOM05D006827 ORTHO05D008725 3.5e-35 152.9 151 47.0
TAR365G1248 Trochodendron aralioides HOM05D006827 ORTHO05D008725 1.3e-34 151.0 147 48.3
MBI18_g27379_MAGBIO Magnolia biondii HOM05D006827 ORTHO05D008725 1.7e-34 150.6 163 46.0
THA.LOC104820318 Tarenaya hassleriana HOM05D006827 ORTHO05D008725 1.7e-34 150.6 159 45.9
ClCG06G004410 Citrullus lanatus HOM05D006827 ORTHO05D008725 2.3e-34 150.2 160 44.4
Gohir.D10G181100 Gossypium hirsutum HOM05D006827 ORTHO05D008725 3.0e-34 149.8 161 46.0
Manes.03G207700 Manihot esculenta HOM05D006827 ORTHO05D008725 3.0e-34 149.8 154 45.5
Nn3g21791 Nelumbo nucifera HOM05D006827 ORTHO05D008725 3.0e-34 149.8 161 44.1
Aa31LG8G4170 Aethionema arabicum HOM05D006827 ORTHO05D008725 3.9e-34 149.4 164 45.7
GSVIVG01034952001 Vitis vinifera HOM05D006827 ORTHO05D008725 3.9e-34 149.4 154 44.2
PSO210G0119 Papaver somniferum HOM05D006827 ORTHO05D008725 5.1e-34 149.1 160 45.0
ATR1120G107 Amborella trichopoda HOM05D006827 ORTHO05D008725 1.1e-33 147.9 147 46.3
Gorai.011G202600 Gossypium raimondii HOM05D006827 ORTHO05D008725 1.1e-33 147.9 161 45.3
Sed0009970 Sechium edule HOM05D006827 ORTHO05D008725 1.1e-33 147.9 162 45.1
Zm00001eb136900 Zea mays HOM05D006827 ORTHO05D008725 1.5e-33 147.5 161 44.7
A01p37130 Brassica napus HOM05D006827 ORTHO05D008725 1.9e-33 147.1 155 46.5
BraA01t03774Z Brassica rapa HOM05D006827 ORTHO05D008725 1.9e-33 147.1 155 46.5
PSO761G0463 Papaver somniferum HOM05D006827 ORTHO05D008725 2.5e-33 146.7 160 44.4
BcaC09g48673 Brassica carinata HOM05D006827 ORTHO05D008725 3.3e-33 146.4 160 45.6
BcaC09g48674 Brassica carinata HOM05D006827 ORTHO05D008725 3.3e-33 146.4 155 46.5
C01p47070 Brassica napus HOM05D006827 ORTHO05D008725 3.3e-33 146.4 160 45.6
BolC1t04673H Brassica oleracea HOM05D006827 ORTHO05D008725 3.3e-33 146.4 160 45.6
AL3G30170 Arabidopsis lyrata HOM05D006827 ORTHO05D008725 4.3e-33 146.0 155 46.5
Gohir.A10G174600 Gossypium hirsutum HOM05D006827 ORTHO05D008725 5.6e-33 145.6 161 44.7
AT3G17170 Arabidopsis thaliana HOM05D006827 ORTHO05D008725 7.3e-33 145.2 160 45.0
FvH4_4g20660 Fragaria vesca HOM05D006827 ORTHO05D008725 7.3e-33 145.2 160 45.6
FAN12G3056 Fragaria x ananassa HOM05D006827 ORTHO05D008725 7.3e-33 145.2 160 45.6
Carub.0003s1692 Capsella rubella HOM05D006827 ORTHO05D008725 9.6e-33 144.8 155 45.8
FAN07G0118 Fragaria x ananassa HOM05D006827 ORTHO05D008725 9.6e-33 144.8 159 45.3
CARHR092440 Cardamine hirsuta HOM05D006827 ORTHO05D008725 1.6e-32 144.1 154 44.8
Sp3g15370 Schrenkiella parvula HOM05D006827 ORTHO05D008725 1.6e-32 144.1 211 41.7
BcaB04g20857 Brassica carinata HOM05D006827 ORTHO05D008725 2.1e-32 143.7 155 45.8
Thhalv10021204m.g Eutrema salsugineum HOM05D006827 ORTHO05D008725 2.1e-32 143.7 151 45.0
Potri.008G101900 Populus trichocarpa HOM05D006827 ORTHO05D008725 2.1e-32 143.7 160 44.4
MELO3C021255.2 Cucumis melo HOM05D006827 ORTHO05D008725 2.8e-32 143.3 165 43.0
Thecc.04G305900 Theobroma cacao HOM05D006827 ORTHO05D008725 2.8e-32 143.3 160 41.9
DCAR_023373 Daucus carota HOM05D006827 ORTHO05D008725 4.7e-32 142.5 153 44.4
MD13G1149000 Malus domestica HOM05D006827 ORTHO05D008725 4.7e-32 142.5 147 46.3
Dinv15137 Davidia involucrata HOM05D006827 ORTHO05D008725 8.1e-32 141.7 159 42.8
Prupe.1G113000 Prunus persica HOM05D006827 ORTHO05D008725 8.1e-32 141.7 156 42.9
Nitab4.5_0002421g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 1.1e-31 141.4 159 42.1
Phvul.006G120200 Phaseolus vulgaris HOM05D006827 ORTHO05D008725 1.4e-31 141.0 156 43.6
arahy.Tifrunner.gnm1.ann1.W8AIPN Arachis hypogaea HOM05D006827 ORTHO05D008725 1.8e-31 140.6 161 42.9
Medtr2g033490 Medicago truncatula HOM05D006827 ORTHO05D008725 1.8e-31 140.6 156 44.2
SGA_v2.0_scaffold227G43227 Striga asiatica HOM05D006827 ORTHO05D008725 1.8e-31 140.6 155 46.5
Ah.13g071520 Amaranthus hybridus HOM05D006827 ORTHO05D008725 2.4e-31 140.2 161 39.8
arahy.Tifrunner.gnm1.ann1.7T6EZL Arachis hypogaea HOM05D006827 ORTHO05D008725 2.4e-31 140.2 161 42.9
Glyma.09G032900 Glycine max HOM05D001281 ORTHO05D008725 2.4e-31 140.2 154 43.5
Nitab4.5_0004047g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 2.4e-31 140.2 159 42.1
Ca_00959_v3 Cicer arietinum L. HOM05D006827 ORTHO05D008725 3.1e-31 139.8 156 44.9
Lj6g0001147 Lotus japonicus HOM05D001281 ORTHO05D001139 3.1e-31 139.8 154 44.8
AUR62016245 Chenopodium quinoa HOM05D002153 ORTHO05D002137 4.0e-31 139.4 151 42.4
RcHm_v2.0_Chr4g0426061 Rosa chinensis HOM05D006827 ORTHO05D008725 4.0e-31 139.4 159 43.4
Sabra08G0077100 Salix brachista HOM05D006827 ORTHO05D007631 4.0e-31 139.4 145 45.5
SEGI_22692 Sequoiadendron giganteum HOM05D006827 ORTHO05D008725 4.0e-31 139.4 151 44.4
Sopen01g023660 Solanum pennellii HOM05D006827 ORTHO05D008725 4.0e-31 139.4 159 41.5
HPP92_027958 Vanilla planifolia HOM05D006827 ORTHO05D008725 5.2e-31 139.0 147 43.5
VMungo0540G1290 Vigna mungo HOM05D006827 ORTHO05D008725 5.2e-31 139.0 154 44.2
CiPaw.01G134600 Carya illinoinensis HOM05D006827 ORTHO05D008725 6.9e-31 138.7 186 39.2
Glyma.15G137900 Glycine max HOM05D006827 ORTHO05D008725 6.9e-31 138.7 154 42.9
PGSC0003DMG400015968 Solanum tuberosum HOM05D006827 ORTHO05D008725 6.9e-31 138.7 159 40.3
CBR_g38487 Chara braunii HOM05D006827 ORTHO05D008725 8.9e-31 138.3 156 48.1
Solyc01g058190.4 Solanum lycopersicum HOM05D006827 ORTHO05D008725 8.9e-31 138.3 159 40.9
Ciclev10005460m.g Citrus clementina HOM05D006827 ORTHO05D008725 1.2e-30 137.9 151 42.4
Oeu014225.1 Olea europaea HOM05D006827 ORTHO05D008725 1.2e-30 137.9 146 46.6
QL03p023650 Quercus lobata HOM05D006827 ORTHO05D008725 1.2e-30 137.9 153 42.5
QL06p013028 Quercus lobata HOM05D006827 ORTHO05D008725 1.2e-30 137.9 153 42.5
TWI53G1816 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 1.2e-30 137.9 160 40.0
Aqoxy2G02656 Aquilegia oxysepala HOM05D006827 ORTHO05D008725 1.5e-30 137.5 141 46.8
CsaV3_UNG230110 Cucumis sativus L. HOM05D006827 ORTHO05D008725 1.5e-30 137.5 128 49.2
Cfa015277 Carpinus fangiana HOM05D006827 ORTHO05D008725 2.0e-30 137.1 153 44.4
Cc03_g00540 Coffea canephora HOM05D006827 ORTHO05D008725 2.0e-30 137.1 162 41.4
arahy.Tifrunner.gnm1.ann1.GV6LK0 Arachis hypogaea HOM05D006827 ORTHO05D008725 2.6e-30 136.7 160 41.9
EL10Ac3g05552 Beta vulgaris HOM05D006827 ORTHO05D008725 2.6e-30 136.7 151 41.1
CAN.G281.10 Capsicum annuum HOM05D006827 ORTHO05D008725 2.6e-30 136.7 159 42.1
Lsat_1_v5_gn_6_116121 Lactuca sativa HOM05D006827 ORTHO05D008725 2.6e-30 136.7 154 42.9
Duzib212G0426 Durio zibethinus HOM05D006827 ORTHO05D008725 3.4e-30 136.3 150 42.0
Migut.N00027 Erythranthe guttata HOM05D006827 ORTHO05D008725 3.4e-30 136.3 162 42.0
Sc25g0003190 Simmondsia chinensis HOM05D006827 ORTHO05D008725 7.6e-30 135.2 159 42.1
Hund11994 Selenicereus undatus HOM05D006827 ORTHO05D008725 1.3e-29 134.4 157 40.8
MSTRG.3845 Avicennia marina HOM05D006827 ORTHO05D008725 1.7e-29 134.0 147 42.2
CANSAT78G0077 Cannabis sativa HOM05D006827 ORTHO05D008725 1.7e-29 134.0 155 43.2
ECA246G4663 Erigeron canadensis HOM05D002153 ORTHO05D002137 1.7e-29 134.0 154 40.9
TPR.G33906 Trifolium pratense HOM05D006827 ORTHO05D008725 1.7e-29 134.0 154 42.9
Psat1g161800 Pisum sativum HOM05D006827 ORTHO05D008725 2.2e-29 133.7 138 46.4
COL.COLO4_34569 Corchorus olitorius HOM05D001281 ORTHO05D001139 2.9e-29 133.3 152 41.4
Eucgr.B03980 Eucalyptus grandis HOM05D006827 ORTHO05D008725 2.9e-29 133.3 164 37.8
Lj3A834T69 Lonicera japonica HOM05D006827 ORTHO05D008725 3.8e-29 132.9 145 43.4
Actinidia31567 Actinidia chinensis HOM05D006827 ORTHO05D008725 4.9e-29 132.5 159 40.3
HanXRQChr05g0148611 Helianthus annuus HOM05D006827 ORTHO05D008725 6.4e-29 132.1 154 40.3
Hma1.2p1_0516F.1_g170510 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 6.4e-29 132.1 153 42.5
unitig_88.g27700 Utricularia gibba HOM05D006827 ORTHO05D008725 6.4e-29 132.1 149 44.3
Lalb_Chr18g0058551 Lupinus albus HOM05D006827 ORTHO05D008725 1.9e-28 130.6 138 43.5
PGR031G1277 Punica granatum HOM05D006827 ORTHO05D008725 4.2e-28 129.4 162 38.9
TWI09G0591 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 4.2e-28 129.4 220 34.1
Rhsim04G0242100 Rhododendron simsii HOM05D006827 ORTHO05D008725 4.6e-27 125.9 141 42.6
SMO351G0308 Selaginella moellendorffii HOM05D006827 ORTHO05D008725 6.0e-27 125.6 97 58.8
vmacro07963 Vaccinium macrocarpon HOM05D006827 ORTHO05D008725 6.6e-26 122.1 127 44.1
Hma1.2p1_0013F.1_g008250 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 1.1e-25 121.3 114 50.9
CAN.G582.1 Capsicum annuum HOM05D006827 ORTHO05D008725 4.3e-25 119.4 144 42.4
Peaxi162Scf00228g00735 Petunia axillaris HOM05D006827 ORTHO05D008725 7.3e-25 118.6 127 42.5
Haze_01351 Corylus avellana HOM05D002153 ORTHO05D002137 1.6e-24 117.5 207 33.8
CsaV3_6G028440 Cucumis sativus L. HOM05D006827 ORTHO05D008725 3.6e-24 116.3 172 36.6
Atru.chr4.3069 Acer truncatum HOM05D006827 ORTHO05D008725 4.0e-23 112.8 111 46.8
arahy.Tifrunner.gnm1.ann1.25F6GK Arachis hypogaea HOM05D006827 ORTHO05D008725 9.6e-17 91.7 159 35.2
PRCOL_00004690 Prasinoderma coloniale HOM05D006827 ORTHO05D008725 9.6e-17 91.7 98 49.0
MD16G1149200 Malus domestica HOM05D006827 ORTHO05D008725 1.4e-15 87.8 96 43.8
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 4.6e-11 72.8 99 42.4
Psat7g189800 Pisum sativum HOM05D006827 ORTHO05D008725 1.4e-07 61.2 72 40.3


User provided reference genes

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