Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c13_15400 Physcomitrium patens HOM05D005908 ORTHO05D007235 8.5e-171 603.6 307 100.0
Mapoly0051s0108 Marchantia polymorpha HOM05D005908 ORTHO05D007235 2.8e-49 199.9 237 43.5
AagrBONN_evm.TU.Sc2ySwM_228.723 Anthoceros agrestis HOM05D005908 ORTHO05D007235 3.1e-48 196.4 266 40.6
MBI12_g29759_MAGBIO Magnolia biondii HOM05D005908 ORTHO05D007235 1.7e-38 164.1 247 35.6
SEGI_20513 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 8.5e-38 161.8 276 35.1
Hma1.2p1_0270F.1_g108430 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 4.2e-37 159.5 236 37.7
TAR375G0795 Trochodendron aralioides HOM05D005908 ORTHO05D007235 9.4e-37 158.3 244 37.3
Dinv35179 Davidia involucrata HOM05D005908 ORTHO05D007235 2.7e-36 156.8 290 34.5
Actinidia32893 Actinidia chinensis HOM05D005908 ORTHO05D007235 1.8e-35 154.1 238 37.8
PSO478G3277 Papaver somniferum HOM05D005908 ORTHO05D007235 3.0e-35 153.3 251 34.7
vmacro08977 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 3.0e-35 153.3 237 37.1
SMO364G0827 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 6.8e-35 152.1 224 40.6
Lj1A993G71 Lonicera japonica HOM05D005908 ORTHO05D007235 8.8e-35 151.8 290 32.4
PSO782G1770 Papaver somniferum HOM05D005908 ORTHO05D007235 1.2e-34 151.4 251 34.7
RcHm_v2.0_Chr1g0376741 Rosa chinensis HOM05D005908 ORTHO05D007235 1.5e-34 151.0 236 36.4
Lsat_1_v5_gn_2_133120 Lactuca sativa HOM05D005908 ORTHO05D007235 2.6e-34 150.2 254 33.5
CAN.G548.2 Capsicum annuum HOM05D005908 ORTHO05D007235 7.5e-34 148.7 249 33.3
HanXRQChr07g0206851 Helianthus annuus HOM05D005908 ORTHO05D007235 7.5e-34 148.7 237 35.9
Ciclev10005584m.g Citrus clementina HOM05D005908 ORTHO05D007235 9.8e-34 148.3 254 33.5
MD13G1243600 Malus domestica HOM05D005908 ORTHO05D007235 9.8e-34 148.3 236 35.6
THA.LOC104811995 Tarenaya hassleriana HOM05D005908 ORTHO05D007235 2.8e-33 146.7 240 35.8
Gorai.006G046700 Gossypium raimondii HOM05D005908 ORTHO05D007235 3.7e-33 146.4 284 32.0
Aa31LG3G8480 Aethionema arabicum HOM05D005908 ORTHO05D007235 4.8e-33 146.0 258 33.7
Gohir.D09G040800 Gossypium hirsutum HOM05D005908 ORTHO05D007235 4.8e-33 146.0 284 32.0
Nn6g34248 Nelumbo nucifera HOM05D005908 ORTHO05D007235 4.8e-33 146.0 277 33.6
Sopen03g005070 Solanum pennellii HOM05D005908 ORTHO05D007235 6.3e-33 145.6 271 32.5
ECA238G1518 Erigeron canadensis HOM05D005908 ORTHO05D007235 8.3e-33 145.2 257 34.2
PGSC0003DMG402014313 Solanum tuberosum HOM05D005908 ORTHO05D007235 8.3e-33 145.2 238 34.0
GSVIVG01010617001 Vitis vinifera HOM05D005908 ORTHO05D007235 8.3e-33 145.2 238 36.1
MSTRG.8762 Avicennia marina HOM05D005908 ORTHO05D007235 1.1e-32 144.8 251 33.9
Oeu030124.1 Olea europaea HOM05D005908 ORTHO05D007235 1.1e-32 144.8 247 35.2
Atru.chr1.515 Acer truncatum HOM05D005908 ORTHO05D007235 1.4e-32 144.4 276 31.2
Sp6g14360 Schrenkiella parvula HOM05D005908 ORTHO05D007235 1.4e-32 144.4 233 36.1
SpUn0060_0050 Schrenkiella parvula HOM05D005908 ORTHO05D007235 1.4e-32 144.4 233 36.1
Thecc.03G170900 Theobroma cacao HOM05D005908 ORTHO05D007235 1.4e-32 144.4 240 33.3
Ah.13g068320 Amaranthus hybridus HOM05D005908 ORTHO05D007235 1.8e-32 144.1 235 36.2
Aqoxy7G00441 Aquilegia oxysepala HOM05D005908 ORTHO05D007235 1.8e-32 144.1 244 35.7
DCAR_009351 Daucus carota HOM05D005908 ORTHO05D007235 1.8e-32 144.1 243 33.7
Solyc03g026200.4 Solanum lycopersicum HOM05D005908 ORTHO05D007235 2.4e-32 143.7 271 31.0
Sed0015226 Sechium edule HOM05D005908 ORTHO05D007235 3.1e-32 143.3 285 32.6
COL.COLO4_14265 Corchorus olitorius HOM05D005908 ORTHO05D007235 4.1e-32 142.9 240 32.9
FAN06G0652 Fragaria x ananassa HOM05D005908 ORTHO05D007235 5.4e-32 142.5 285 31.6
QL09p014976 Quercus lobata HOM05D005908 ORTHO05D007235 5.4e-32 142.5 285 31.9
Lj4g0016789 Lotus japonicus HOM05D005908 ORTHO05D007235 9.1e-32 141.7 264 33.7
Cpa.g.sc107.9 Carica papaya HOM05D005908 ORTHO05D007235 1.2e-31 141.4 284 32.7
FvH4_7g15530 Fragaria vesca HOM05D005908 ORTHO05D007235 1.2e-31 141.4 285 31.2
FAN06G2086 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.2e-31 141.4 285 31.2
Thhalv10014339m.g Eutrema salsugineum HOM05D005908 ORTHO05D007235 2.7e-31 140.2 264 33.3
Lj2g0007665 Lotus japonicus HOM05D005908 ORTHO05D007235 2.7e-31 140.2 264 33.7
Zm00001eb021390 Zea mays HOM05D005908 ORTHO05D007235 2.7e-31 140.2 286 30.4
FAN10G2728 Fragaria x ananassa HOM05D005908 ORTHO05D007235 3.5e-31 139.8 243 33.7
SGA_v2.0_scaffold2G01076 Striga asiatica HOM05D005908 ORTHO05D007235 3.5e-31 139.8 224 36.6
CANSAT21G0021 Cannabis sativa HOM05D005908 ORTHO05D007235 4.5e-31 139.4 241 34.4
FAN03G0397 Fragaria x ananassa HOM05D005908 ORTHO05D007235 4.5e-31 139.4 236 33.9
ClCG05G007830 Citrullus lanatus HOM05D005908 ORTHO05D007235 5.9e-31 139.0 286 32.2
Lj2g0024281 Lotus japonicus HOM05D005908 ORTHO05D007235 5.9e-31 139.0 264 34.1
Manes.06G144000 Manihot esculenta HOM05D005908 ORTHO05D007235 5.9e-31 139.0 266 32.7
FAN10G3232 Fragaria x ananassa HOM05D005908 ORTHO05D007235 7.7e-31 138.7 243 33.3
CiPaw.04G067300 Carya illinoinensis HOM05D005908 ORTHO05D007235 1.0e-30 138.3 248 32.3
CsaV3_3G016830 Cucumis sativus L. HOM05D005908 ORTHO05D007235 1.0e-30 138.3 239 34.7
TPR.G5821 Trifolium pratense HOM05D005908 ORTHO05D007235 1.0e-30 138.3 256 34.0
TWI23G0151 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 1.0e-30 138.3 243 34.6
BraA03t10874Z Brassica rapa HOM05D005908 ORTHO05D007235 1.3e-30 137.9 260 32.7
AL8G26480 Arabidopsis lyrata HOM05D005908 ORTHO05D007235 1.7e-30 137.5 251 31.5
A03p15840 Brassica napus HOM05D005908 ORTHO05D007235 1.7e-30 137.5 260 32.7
FAN01G2408 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.2e-30 137.1 236 33.5
Potri.015G138400 Populus trichocarpa HOM05D005908 ORTHO05D007235 2.2e-30 137.1 263 31.2
SalBow1G0690 Salvia bowleyana HOM05D005908 ORTHO05D007235 3.8e-30 136.3 245 34.3
HPP92_001363 Vanilla planifolia HOM05D005908 ORTHO05D007235 5.0e-30 136.0 247 34.0
arahy.Tifrunner.gnm1.ann1.580JC2 Arachis hypogaea HOM05D005908 ORTHO05D007235 8.5e-30 135.2 271 32.5
Sabra15G0149500 Salix brachista HOM05D005908 ORTHO05D007235 1.1e-29 134.8 262 30.9
BcaB01g04184 Brassica carinata HOM05D005908 ORTHO05D007235 1.5e-29 134.4 233 34.3
CANSAT21G0323 Cannabis sativa HOM05D005908 ORTHO05D007235 1.5e-29 134.4 241 34.0
CARHR265040 Cardamine hirsuta HOM05D005908 ORTHO05D007235 1.5e-29 134.4 233 33.0
Rhsim04G0117700 Rhododendron simsii HOM05D005908 ORTHO05D007235 1.5e-29 134.4 294 31.6
BcaC01g06164 Brassica carinata HOM05D005908 ORTHO05D007235 1.9e-29 134.0 260 32.3
C03p18500 Brassica napus HOM05D005908 ORTHO05D007235 1.9e-29 134.0 260 32.3
BolC3t14247H Brassica oleracea HOM05D005908 ORTHO05D007235 1.9e-29 134.0 260 32.3
arahy.Tifrunner.gnm1.ann1.K8NCYF Arachis hypogaea HOM05D005908 ORTHO05D007235 2.5e-29 133.7 273 32.6
Cc10_g10330 Coffea canephora HOM05D005908 ORTHO05D007235 2.5e-29 133.7 238 33.6
Psat1g113160 Pisum sativum HOM05D005908 ORTHO05D007235 4.2e-29 132.9 237 34.2
Migut.F00374 Erythranthe guttata HOM05D005908 ORTHO05D007235 5.5e-29 132.5 254 33.9
VMungo0464G0636 Vigna mungo HOM05D005908 ORTHO05D007235 5.5e-29 132.5 245 32.2
AT5G52110 Arabidopsis thaliana HOM05D005908 ORTHO05D007235 7.2e-29 132.1 233 33.0
TWI39G0968 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 7.2e-29 132.1 238 34.5
ATR0757G107 Amborella trichopoda HOM05D005908 ORTHO05D007235 9.5e-29 131.7 224 31.7
Glyma.16G198400 Glycine max HOM05D005908 ORTHO05D007235 9.5e-29 131.7 237 34.2
Lalb_Chr01g0009141 Lupinus albus HOM05D005908 ORTHO05D007235 9.5e-29 131.7 237 34.2
Carub.0008s1219 Capsella rubella HOM05D005908 ORTHO05D007235 1.6e-28 131.0 261 31.4
Nitab4.5_0005024g0020 Nicotiana tabacum HOM05D005908 ORTHO05D007235 2.8e-28 130.2 268 30.2
Cfa008281 Carpinus fangiana HOM05D005908 ORTHO05D007235 3.6e-28 129.8 227 33.5
Hma1.2p1_0270F.1_g108420 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 4.7e-28 129.4 289 31.1
Hund04705 Selenicereus undatus HOM05D005908 ORTHO05D007235 4.7e-28 129.4 258 32.9
CDE11G0458 Ceratophyllum demersum HOM05D003547 ORTHO05D004236 1.0e-27 128.3 233 33.0
SMO353G0077 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 1.4e-27 127.9 225 37.8
vmacro06719 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 2.3e-27 127.1 252 33.3
CBR_g58789 Chara braunii HOM05D005908 ORTHO05D007235 1.5e-26 124.4 143 44.8
AUR62016029 Chenopodium quinoa HOM05D005908 ORTHO05D007235 1.5e-26 124.4 236 33.9
Eucgr.K00226 Eucalyptus grandis HOM05D005908 ORTHO05D007235 3.4e-26 123.2 249 33.3
Prupe.1G077000 Prunus persica HOM05D005908 ORTHO05D007235 2.8e-25 120.2 263 31.2
AUR62021234 Chenopodium quinoa HOM05D005908 ORTHO05D007235 1.4e-24 117.9 214 35.0
MCO01G567 Micromonas commoda HOM05D005908 ORTHO05D007235 7.0e-24 115.5 244 33.6
Cre12.g537850 Chlamydomonas reinhardtii HOM05D005908 ORTHO05D007235 1.2e-23 114.8 324 30.6
Nitab4.5_0001083g0110 Nicotiana tabacum HOM05D005908 ORTHO05D007235 2.7e-23 113.6 291 29.2
SEGI_01877 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 2.7e-23 113.6 162 40.7
Sc25g0000390 Simmondsia chinensis HOM05D005908 ORTHO05D007235 7.8e-23 112.1 237 30.0
Gohir.A09G040000 Gossypium hirsutum HOM05D005908 ORTHO05D007235 1.7e-22 110.9 213 31.9
Haze_13753 Corylus avellana HOM05D005908 ORTHO05D007235 5.0e-22 109.4 183 35.0
EL10Ac3g05695 Beta vulgaris HOM05D005908 ORTHO05D007235 2.5e-21 107.1 177 35.0
HPP92_001354 Vanilla planifolia HOM05D005908 ORTHO05D007235 5.6e-21 105.9 256 31.2
Phvul.004G121600 Phaseolus vulgaris HOM05D005908 ORTHO05D007235 2.3e-19 100.5 139 39.6
Peaxi162Scf00915g00250 Petunia axillaris HOM05D005908 ORTHO05D007235 4.4e-18 96.3 255 28.2
Pp3c4_22440 Physcomitrium patens HOM05D005908 ORTHO05D007235 1.8e-16 90.9 66 69.7
unitig_37.g11958 Utricularia gibba HOM05D005908 ORTHO05D007235 2.4e-16 90.5 187 29.4
vmacro06721 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 9.5e-13 78.6 217 28.6
CSS0007682 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 1.4e-11 74.7 78 52.6
Dinv28477 Davidia involucrata HOM05D005908 ORTHO05D007235 8.9e-11 72.0 74 52.7
MELO3C006877.2 Cucumis melo HOM05D005908 ORTHO05D007235 2.6e-10 70.5 123 37.4
Lsat_1_v5_gn_2_133160 Lactuca sativa HOM05D005908 ORTHO05D007235 3.7e-09 66.6 127 32.3
Actinidia34081 Actinidia chinensis HOM05D005908 ORTHO05D007235 3.5e-07 60.1 144 27.8


User provided reference genes

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