Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_1050 Physcomitrium patens HOM05D003836 ORTHO05D004556 0.0e+00 1381.3 700 100.0
Mapoly0019s0007 Marchantia polymorpha HOM05D003836 ORTHO05D004556 1.8e-163 580.5 550 57.6
TAR374G0617 Trochodendron aralioides HOM05D003836 ORTHO05D004556 2.6e-138 496.9 496 51.8
FvH4_4g33240 Fragaria vesca HOM05D003836 ORTHO05D004556 7.7e-135 485.3 465 52.5
GSVIVG01011621001 Vitis vinifera HOM05D003836 ORTHO05D004556 6.5e-134 482.3 440 55.2
Ciclev10014689m.g Citrus clementina HOM05D003836 ORTHO05D004556 1.9e-133 480.7 436 56.2
Cfa015051 Carpinus fangiana HOM05D003836 ORTHO05D004556 1.2e-132 478.0 451 54.5
CiPaw.05G187900 Carya illinoinensis HOM05D003836 ORTHO05D004556 1.2e-132 478.0 503 52.1
Ca_16122_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 2.7e-132 476.9 438 55.9
TAR622G1236 Trochodendron aralioides HOM05D003836 ORTHO05D004556 3.6e-132 476.5 496 50.8
Atru.chr7.2694 Acer truncatum HOM05D003836 ORTHO05D004556 6.1e-132 475.7 436 56.2
CsaV3_7G022080 Cucumis sativus L. HOM05D003836 ORTHO05D004556 6.1e-132 475.7 431 57.5
TWI74G0623 Tripterygium wilfordii HOM05D003836 ORTHO05D004556 7.9e-132 475.3 432 56.5
Nn4g24475 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.8e-131 474.2 444 55.2
PSO063G7099 Papaver somniferum HOM05D003836 ORTHO05D004556 2.3e-131 473.8 448 54.7
Manes.15G136900 Manihot esculenta HOM05D003836 ORTHO05D004556 3.9e-131 473.0 431 55.0
PSO782G5172 Papaver somniferum HOM05D003836 ORTHO05D004556 8.8e-131 471.9 436 55.5
Aqoxy6G01037 Aquilegia oxysepala HOM05D003836 ORTHO05D004556 1.1e-130 471.5 425 56.7
Glyma.04G189300 Glycine max HOM05D003836 ORTHO05D004556 1.5e-130 471.1 438 55.0
ATR0021G013 Amborella trichopoda HOM05D003836 ORTHO05D004556 4.4e-130 469.5 438 58.2
FAN22G0514 Fragaria x ananassa HOM05D003836 ORTHO05D004556 4.4e-130 469.5 436 54.6
Lj1g0024673 Lotus japonicus HOM05D003836 ORTHO05D004556 9.7e-130 468.4 451 53.4
FAN17G2261 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.7e-129 467.6 465 51.8
FAN07G2679 Fragaria x ananassa HOM05D003836 ORTHO05D004556 3.7e-129 466.5 436 54.1
Manes.17G086000 Manihot esculenta HOM05D003836 ORTHO05D004556 4.8e-129 466.1 446 54.7
FAN12G1258 Fragaria x ananassa HOM05D003836 ORTHO05D004556 3.1e-128 463.4 465 51.6
Sed0017171 Sechium edule HOM05D003836 ORTHO05D004556 3.1e-128 463.4 425 57.2
Glyma.06G176300 Glycine max HOM05D003836 ORTHO05D004556 4.1e-128 463.0 438 54.3
Phvul.009G172600 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 4.1e-128 463.0 439 54.2
TPR.G35600 Trifolium pratense HOM05D003836 ORTHO05D004556 4.1e-128 463.0 461 52.7
Gohir.A13G027900 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.6e-127 461.1 447 53.5
RcHm_v2.0_Chr4g0442391 Rosa chinensis HOM05D003836 ORTHO05D004556 1.6e-127 461.1 510 49.6
ClCG11G007570 Citrullus lanatus HOM05D003836 ORTHO05D004556 2.6e-127 460.3 431 56.1
PGR142G3191 Punica granatum HOM05D003836 ORTHO05D004556 4.5e-127 459.5 431 55.2
Gorai.013G030000 Gossypium raimondii HOM05D003836 ORTHO05D004556 1.3e-126 458.0 447 53.0
CANSAT78G2203 Cannabis sativa HOM05D003836 ORTHO05D004556 2.2e-126 457.2 453 51.7
Gorai.008G170400 Gossypium raimondii HOM05D003836 ORTHO05D004556 2.2e-126 457.2 432 53.5
Zm00001eb216180 Zea mays HOM05D003836 ORTHO05D004556 6.5e-126 455.7 413 57.6
VMungo1309G0617 Vigna mungo HOM05D003836 ORTHO05D004556 1.9e-125 454.1 503 49.5
Atru.chr11.806 Acer truncatum HOM05D003836 ORTHO05D004556 2.5e-125 453.8 395 59.0
Migut.E00502 Erythranthe guttata HOM05D003836 ORTHO05D004556 3.2e-125 453.4 419 54.7
Nn3g18432 Nelumbo nucifera HOM05D003836 ORTHO05D004556 9.4e-125 451.8 431 54.5
MD16G1015700 Malus domestica HOM05D003836 ORTHO05D004556 2.1e-124 450.7 436 54.4
CARHR060610 Cardamine hirsuta HOM05D003836 ORTHO05D004556 1.4e-123 448.0 425 52.9
Medtr3g076570 Medicago truncatula HOM05D003836 ORTHO05D004556 2.3e-123 447.2 438 53.7
Potri.010G103400 Populus trichocarpa HOM05D003836 ORTHO05D004556 2.3e-123 447.2 447 52.1
Prupe.1G335900 Prunus persica HOM05D003836 ORTHO05D004556 4.0e-123 446.4 513 48.5
Lalb_Chr11g0070001 Lupinus albus HOM05D003836 ORTHO05D004556 8.8e-123 445.3 435 53.8
Eucgr.G02079 Eucalyptus grandis HOM05D003836 ORTHO05D004556 1.5e-122 444.5 440 53.9
AT1G67960 Arabidopsis thaliana HOM05D003836 ORTHO05D004556 4.4e-122 443.0 431 52.4
Sp5g22940 Schrenkiella parvula HOM05D003836 ORTHO05D004556 4.4e-122 443.0 436 51.8
Gohir.D13G026700 Gossypium hirsutum HOM05D003836 ORTHO05D004556 5.7e-122 442.6 448 52.2
Haze_10840 Corylus avellana HOM05D003836 ORTHO05D004556 7.5e-122 442.2 451 52.5
AL2G26960 Arabidopsis lyrata HOM05D003836 ORTHO05D004556 9.7e-122 441.8 431 52.2
arahy.Tifrunner.gnm1.ann1.HCE13Z Arachis hypogaea HOM05D003836 ORTHO05D004556 3.7e-121 439.9 456 51.3
Hma1.2p1_2859F.1_g329510 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 3.7e-121 439.9 398 55.8
arahy.Tifrunner.gnm1.ann1.THT645 Arachis hypogaea HOM05D003836 ORTHO05D004556 4.8e-121 439.5 479 49.5
Carub.0002s1445 Capsella rubella HOM05D003836 ORTHO05D004556 6.3e-121 439.1 431 52.2
QL03p038287 Quercus lobata HOM05D003836 ORTHO05D004556 4.1e-120 436.4 495 49.5
Thecc.02G307000 Theobroma cacao HOM05D003836 ORTHO05D004556 7.0e-120 435.6 372 59.1
Cc11_g06410 Coffea canephora HOM05D003836 ORTHO05D004556 7.7e-119 432.2 434 53.0
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea HOM05D003836 ORTHO05D004556 6.5e-118 429.1 476 49.8
Glyma.07G191900 Glycine max HOM05D003836 ORTHO05D004556 1.1e-117 428.3 427 54.1
Lsat_1_v5_gn_3_104360 Lactuca sativa HOM05D003836 ORTHO05D004556 1.9e-117 427.6 426 52.8
MELO3C013236.2 Cucumis melo HOM05D003836 ORTHO05D004556 2.5e-117 427.2 409 56.0
Dinv02294 Davidia involucrata HOM05D003836 ORTHO05D004556 9.4e-117 425.2 431 52.2
Thhalv10018303m.g Eutrema salsugineum HOM05D003836 ORTHO05D004556 1.0e-115 421.8 432 50.9
Psat5g116920 Pisum sativum HOM05D003836 ORTHO05D004556 1.4e-115 421.4 412 53.9
ECA246G1487 Erigeron canadensis HOM05D003836 ORTHO05D004556 2.3e-115 420.6 381 55.9
Ah.02g131240 Amaranthus hybridus HOM05D003836 ORTHO05D004556 4.4e-114 416.4 421 53.4
AagrBONN_evm.TU.Sc2ySwM_228.1822 Anthoceros agrestis HOM05D003836 ORTHO05D004556 1.7e-113 414.5 339 62.5
A07p34480 Brassica napus HOM05D003836 ORTHO05D004556 3.7e-113 413.3 419 50.8
TPR.G32436 Trifolium pratense HOM05D003836 ORTHO05D004556 1.6e-111 407.9 403 53.6
DCAR_023556 Daucus carota HOM05D003836 ORTHO05D004556 1.7e-110 404.4 431 50.1
Sabra10G0076000 Salix brachista HOM05D003836 ORTHO05D004556 6.5e-110 402.5 453 48.8
BcaB03g15387 Brassica carinata HOM05D003836 ORTHO05D004556 3.6e-108 396.7 432 48.4
Gohir.A12G154400 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.6e-108 396.7 367 53.7
Aa31sc536G20 Aethionema arabicum HOM05D003836 ORTHO05D004556 4.7e-108 396.4 455 48.8
Psat7g111040 Pisum sativum HOM05D003836 ORTHO05D004556 1.8e-107 394.4 366 56.0
EL10Ac8g19453 Beta vulgaris HOM05D003836 ORTHO05D004556 3.0e-107 393.7 480 48.5
Dinv32673 Davidia involucrata HOM05D003836 ORTHO05D004556 4.0e-107 393.3 431 49.9
Gohir.D12G157600 Gossypium hirsutum HOM05D003836 ORTHO05D004556 6.8e-107 392.5 367 53.4
Duzib251G0897 Durio zibethinus HOM05D003836 ORTHO05D004556 3.4e-106 390.2 446 48.4
Glyma.13G184600 Glycine max HOM05D003836 ORTHO05D004556 9.8e-106 388.7 391 54.2
Cpa.g.sc2.157 Carica papaya HOM05D003836 ORTHO05D004556 2.8e-105 387.1 403 53.3
COL.COLO4_27608 Corchorus olitorius HOM05D003836 ORTHO05D004556 3.7e-105 386.7 378 54.8
Os03g0715400 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 6.3e-105 386.0 335 60.0
Duzib268G0198 Durio zibethinus HOM05D003836 ORTHO05D004556 2.4e-104 384.0 499 44.5
VMungo0251G2034 Vigna mungo HOM05D003836 ORTHO05D004556 1.6e-103 381.3 412 51.9
SalBow2G2298 Salvia bowleyana HOM05D003836 ORTHO05D004556 1.7e-102 377.9 450 46.7
unitig_8.g4015 Utricularia gibba HOM05D003836 ORTHO05D004556 3.7e-97 360.1 560 40.7
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 8.3e-97 359.0 478 46.2
Medtr4g090465 Medicago truncatula HOM05D003836 ORTHO05D004556 1.8e-96 357.8 366 53.3
BolC6t39223H Brassica oleracea HOM05D003836 ORTHO05D004556 3.5e-95 353.6 406 48.3
BcaC08g46221 Brassica carinata HOM05D003836 ORTHO05D004556 2.1e-92 344.4 436 44.0
Phvul.002G223900 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 1.5e-90 338.2 409 48.2
SMO358G0292 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 8.3e-89 332.4 405 47.2
arahy.Tifrunner.gnm1.ann1.36Q8NS Arachis hypogaea HOM05D003836 ORTHO05D004556 1.2e-87 328.6 456 41.9
arahy.Tifrunner.gnm1.ann1.6NWB5V Arachis hypogaea HOM05D003836 ORTHO05D004556 3.9e-86 323.6 409 46.2
Lj6A734G74 Lonicera japonica HOM05D003836 ORTHO05D004556 2.1e-84 317.8 464 40.3
Solyc06g051440.4 Solanum lycopersicum HOM05D003836 ORTHO05D004556 2.9e-81 307.4 290 53.8
SHI04351 Sapria himalayana HOM05D003836 ORTHO05D004556 6.8e-75 286.2 354 47.2
BcaB03g15147 Brassica carinata HOM05D003836 ORTHO05D004556 3.5e-71 273.9 389 40.6
C06p42030 Brassica napus HOM05D003836 ORTHO05D004556 3.9e-70 270.4 389 40.4
Oeu036124.4 Olea europaea HOM05D003836 ORTHO05D004556 8.1e-68 262.7 259 53.7
Lalb_Chr23g0273371 Lupinus albus HOM05D003836 ORTHO05D004556 3.4e-66 257.3 259 53.7
arahy.Tifrunner.gnm1.ann1.0AB4R7 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.7e-65 255.0 409 42.1
MBI11_g36366_MAGBIO Magnolia biondii HOM05D003836 ORTHO05D004556 4.2e-64 250.4 236 56.4
AUR62033051 Chenopodium quinoa HOM05D003836 ORTHO05D004556 7.1e-64 249.6 362 42.0
Nitab4.5_0001516g0010 Nicotiana tabacum HOM05D003836 ORTHO05D004556 1.1e-61 242.3 569 30.9
Sc10g0004880 Simmondsia chinensis HOM05D003836 ORTHO05D004556 5.6e-61 240.0 198 59.6
PRCOL_00001721 Prasinoderma coloniale HOM05D003836 ORTHO05D004556 6.7e-54 216.5 411 36.3
MD13G1017500 Malus domestica HOM05D003836 ORTHO05D004556 1.1e-53 215.7 302 42.1
Sc10g0004870 Simmondsia chinensis HOM05D003836 ORTHO05D004556 1.8e-51 208.4 237 49.4
HanXRQChr15g0473551 Helianthus annuus HOM05D003836 ORTHO05D004556 6.9e-51 206.5 202 53.0
Sopen06g017410 Solanum pennellii HOM05D003836 ORTHO05D004556 4.9e-49 200.3 201 52.2
Peaxi162Scf00825g00424 Petunia axillaris HOM05D003836 ORTHO05D004556 6.4e-49 199.9 210 51.4
MCO03G489 Micromonas commoda HOM05D003836 ORTHO05D004556 4.6e-47 193.7 384 33.3
Lalb_Chr23g0273381 Lupinus albus HOM05D003836 ORTHO05D004556 7.9e-47 193.0 169 56.2
HanXRQChr15g0473541 Helianthus annuus HOM05D003836 ORTHO05D004556 3.9e-46 190.7 167 55.7
CSS0006660 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 3.3e-45 187.6 167 55.7
Nitab4.5_0001227g0030 Nicotiana tabacum HOM05D003836 ORTHO05D004556 4.3e-45 187.2 339 34.8
AUR62042201 Chenopodium quinoa HOM05D003836 ORTHO05D004556 2.1e-44 184.9 270 44.1
BcaC08g46015 Brassica carinata HOM05D003836 ORTHO05D004556 3.4e-42 177.6 188 53.2
Peaxi162Scf00825g00423 Petunia axillaris HOM05D003836 ORTHO05D004556 1.4e-40 172.2 165 50.9
C01p04020 Brassica napus HOM05D003836 ORTHO05D004556 1.6e-39 168.7 164 51.2
DCAR_030293 Daucus carota HOM05D003836 ORTHO05D004556 6.0e-39 166.8 343 32.4
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 2.2e-33 148.3 191 42.9
MD13G1017700 Malus domestica HOM05D003836 ORTHO05D004556 2.2e-33 148.3 125 56.8
Cre02.g091000 Chlamydomonas reinhardtii HOM05D003836 ORTHO05D004556 6.5e-33 146.7 477 26.0
Ca_18504_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 7.2e-32 143.3 183 48.6
Nn8g39028 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.1e-29 136.0 145 52.4
Hma1.2p1_1450F.1_g284160 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 3.3e-29 134.4 132 49.2
Nn6g35439 Nelumbo nucifera HOM05D003836 ORTHO05D004556 3.1e-27 127.9 131 56.5
Nn6g35150 Nelumbo nucifera HOM05D003836 ORTHO05D004556 8.5e-25 119.8 120 54.2
Gohir.D13G133800 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.6e-23 114.4 124 48.4
arahy.Tifrunner.gnm1.ann1.I9RBIQ Arachis hypogaea HOM05D003836 ORTHO05D004556 1.0e-22 112.8 177 41.8
arahy.Tifrunner.gnm1.ann1.MA62LX Arachis hypogaea HOM05D003836 ORTHO05D004556 2.2e-20 105.1 88 62.5
Hma1.2p1_0658F.1_g197210 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 2.2e-20 105.1 101 49.5
Cfa025144 Carpinus fangiana HOM05D003836 ORTHO05D004556 8.2e-20 103.2 322 28.6
HPP92_020596 Vanilla planifolia HOM05D003836 ORTHO05D004556 1.2e-18 99.4 107 50.5
C06p38100 Brassica napus HOM05D003836 ORTHO05D004556 5.5e-16 90.5 239 31.8
BolC6t38907H Brassica oleracea HOM05D003836 ORTHO05D004556 5.5e-16 90.5 239 31.8
CAN.G2032.2 Capsicum annuum HOM05D003836 ORTHO05D004556 1.6e-15 89.0 133 40.6
SMO278G0031 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 2.7e-15 88.2 149 43.0
Gohir.D06G130832 Gossypium hirsutum HOM05D005098 ORTHO05D004556 1.8e-14 85.5 156 38.5
RcHm_v2.0_Chr2g0114371 Rosa chinensis HOM05D003836 ORTHO05D004556 8.8e-14 83.2 95 50.5
SEGI_35804 Sequoiadendron giganteum HOM05D003836 ORTHO05D004556 1.1e-13 82.8 89 43.8
SMO200G0209 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 4.1e-11 74.3 82 50.0
arahy.Tifrunner.gnm1.ann1.ANFG2H Arachis hypogaea HOM05D003836 ORTHO05D004556 5.3e-11 73.9 93 49.5
TPR.G24606 Trifolium pratense HOM05D003836 ORTHO05D004556 7.0e-11 73.6 70 52.9
Cpa.g.sc2.159 Carica papaya HOM05D003836 ORTHO05D004556 2.0e-10 72.0 70 51.4
Oeu043972.2 Olea europaea HOM05D003836 ORTHO05D004556 2.2e-09 68.6 64 51.6
Gorai.010G152700 Gossypium raimondii HOM05D003836 ORTHO05D004556 5.0e-09 67.4 54 61.1
RcHm_v2.0_Chr4g0390701 Rosa chinensis HOM05D003836 ORTHO05D004556 1.6e-07 62.4 44 56.8
Nn6g35438 Nelumbo nucifera HOM05D003836 ORTHO05D004556 6.1e-07 60.5 46 65.2
Hund15725 Selenicereus undatus HOM05D003836 ORTHO05D004556 8.0e-07 60.1 74 35.1
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea HOM05D003836 ORTHO05D004556 1.8e-06 58.9 68 47.1
arahy.Tifrunner.gnm1.ann1.2AK3X2 Arachis hypogaea HOM05D003836 ORTHO05D004556 2.3e-06 58.5 77 41.6
arahy.Tifrunner.gnm1.ann1.62N7D7 Arachis hypogaea HOM05D003836 ORTHO05D004556 2.3e-06 58.5 77 41.6
arahy.Tifrunner.gnm1.ann1.6IM5NS Arachis hypogaea HOM05D003836 ORTHO05D004556 2.3e-06 58.5 77 41.6
arahy.Tifrunner.gnm1.ann1.QY8RSF Arachis hypogaea HOM05D003836 ORTHO05D004556 2.3e-06 58.5 77 41.6
arahy.Tifrunner.gnm1.ann1.XXVP91 Arachis hypogaea HOM05D003836 ORTHO05D004556 4.0e-06 57.8 82 40.2


User provided reference genes

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