Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_4770 Physcomitrium patens HOM05D004785 ORTHO05D005704 8.3e-167 590.5 342 100.0
Pp3c11_4670 Physcomitrium patens HOM05D004785 ORTHO05D005704 2.6e-112 409.5 251 100.0
Pp3c7_22470 Physcomitrium patens HOM05D004785 ORTHO05D005704 4.1e-89 332.4 342 60.2
Mapoly0063s0041 Marchantia polymorpha HOM05D004785 ORTHO05D005704 1.6e-48 197.6 343 43.4
AagrBONN_evm.TU.Sc2ySwM_228.206 Anthoceros agrestis HOM05D004785 ORTHO05D005704 1.1e-46 191.4 344 40.7
Dinv43463 Davidia involucrata HOM05D004785 ORTHO05D005704 4.4e-43 179.5 322 44.4
Glyma.15G272000 Glycine max HOM05D004785 ORTHO05D005704 5.8e-43 179.1 304 44.7
MBI04_g14260_MAGBIO Magnolia biondii HOM05D004785 ORTHO05D005704 7.5e-43 178.7 308 42.9
Glyma.08G152600 Glycine max HOM05D004785 ORTHO05D005704 1.3e-42 177.9 313 44.1
Aqoxy1G00294 Aquilegia oxysepala HOM05D004785 ORTHO05D005704 1.7e-42 177.6 308 43.2
Dinv09378 Davidia involucrata HOM05D004785 ORTHO05D005704 1.7e-42 177.6 312 44.2
CiPaw.13G002800 Carya illinoinensis HOM05D004785 ORTHO05D005704 3.7e-42 176.4 311 42.8
Cc02_g27530 Coffea canephora HOM05D004785 ORTHO05D005704 8.3e-42 175.3 330 40.3
VMungo1080G1418 Vigna mungo HOM05D004785 ORTHO05D005704 8.3e-42 175.3 312 43.6
Gohir.D08G037900 Gossypium hirsutum HOM05D004785 ORTHO05D005704 1.4e-41 174.5 308 44.2
RcHm_v2.0_Chr1g0314901 Rosa chinensis HOM05D004785 ORTHO05D005704 1.4e-41 174.5 323 41.8
ECA246G0971 Erigeron canadensis HOM05D004785 ORTHO05D005704 1.9e-41 174.1 304 44.4
Gorai.004G035900 Gossypium raimondii HOM05D004785 ORTHO05D005704 1.9e-41 174.1 308 44.2
Rhsim01G0130900 Rhododendron simsii HOM05D004785 ORTHO05D005704 2.4e-41 173.7 315 42.9
FvH4_7g00680 Fragaria vesca HOM05D004785 ORTHO05D005704 5.4e-41 172.6 307 43.3
FAN06G5068 Fragaria x ananassa HOM05D004785 ORTHO05D005704 5.4e-41 172.6 307 43.3
HanXRQChr15g0479141 Helianthus annuus HOM05D004785 ORTHO05D005704 5.4e-41 172.6 305 43.0
FAN03G2451 Fragaria x ananassa HOM05D004785 ORTHO05D005704 7.0e-41 172.2 306 43.5
Sed0007108 Sechium edule HOM05D004785 ORTHO05D005704 7.0e-41 172.2 312 41.0
TAR636G1066 Trochodendron aralioides HOM05D004785 ORTHO05D005704 7.0e-41 172.2 317 42.6
CAN.G170.130 Capsicum annuum HOM05D004785 ORTHO05D005704 9.2e-41 171.8 328 40.2
Phvul.005G036800 Phaseolus vulgaris HOM05D004785 ORTHO05D005704 9.2e-41 171.8 310 43.5
SalBow4G2313 Salvia bowleyana HOM05D004785 ORTHO05D005704 9.2e-41 171.8 320 41.9
arahy.Tifrunner.gnm1.ann1.59DMFX Arachis hypogaea HOM05D004785 ORTHO05D005704 1.2e-40 171.4 304 43.4
FAN01G2446 Fragaria x ananassa HOM05D004785 ORTHO05D005704 2.7e-40 170.2 307 43.3
FAN01G2822 Fragaria x ananassa HOM05D004785 ORTHO05D005704 2.7e-40 170.2 307 43.3
FAN10G3515 Fragaria x ananassa HOM05D004785 ORTHO05D005704 2.7e-40 170.2 307 43.0
Lalb_Chr01g0008111 Lupinus albus HOM05D004785 ORTHO05D005704 2.7e-40 170.2 318 42.8
Potri.001G269900 Populus trichocarpa HOM05D004785 ORTHO05D005704 2.7e-40 170.2 315 41.9
arahy.Tifrunner.gnm1.ann1.M8XEBR Arachis hypogaea HOM05D004785 ORTHO05D005704 3.5e-40 169.9 304 43.4
Lj3g0000927 Lotus japonicus HOM05D004785 ORTHO05D005704 3.5e-40 169.9 316 44.3
Thecc.01G414000 Theobroma cacao HOM05D004785 ORTHO05D005704 3.5e-40 169.9 313 42.5
Migut.N01482 Erythranthe guttata HOM05D004785 ORTHO05D005704 4.6e-40 169.5 310 42.6
MSTRG.20603 Avicennia marina HOM05D004785 ORTHO05D005704 1.0e-39 168.3 309 42.4
Sed0027076 Sechium edule HOM05D004785 ORTHO05D005704 1.3e-39 167.9 311 40.2
Medtr8g036260 Medicago truncatula HOM05D004785 ORTHO05D005704 1.7e-39 167.5 305 41.6
Nn7g36099 Nelumbo nucifera HOM05D004785 ORTHO05D005704 1.7e-39 167.5 322 41.0
Nitab4.5_0006850g0010 Nicotiana tabacum HOM05D004785 ORTHO05D005704 1.7e-39 167.5 313 39.9
TPR.G21739 Trifolium pratense HOM05D004785 ORTHO05D005704 1.7e-39 167.5 307 42.7
CsaV3_7G031250 Cucumis sativus L. HOM05D004785 ORTHO05D005704 2.3e-39 167.2 309 41.1
Lalb_Chr19g0132061 Lupinus albus HOM05D004785 ORTHO05D005704 6.6e-39 165.6 315 42.9
Psat4g149360 Pisum sativum HOM05D004785 ORTHO05D005704 6.6e-39 165.6 302 43.0
Solyc01g086890.3 Solanum lycopersicum HOM05D004785 ORTHO05D005704 6.6e-39 165.6 321 41.1
Carub.0005s1846 Capsella rubella HOM05D004785 ORTHO05D005704 8.6e-39 165.2 317 39.7
CDE10G0170 Ceratophyllum demersum HOM05D004785 ORTHO05D005704 1.1e-38 164.9 308 40.6
PGSC0003DMG400025264 Solanum tuberosum HOM05D004785 ORTHO05D005704 1.1e-38 164.9 320 39.7
MELO3C023531.2 Cucumis melo HOM05D004785 ORTHO05D005704 1.5e-38 164.5 307 40.7
Medtr8g036890 Medicago truncatula HOM05D004785 ORTHO05D005704 1.5e-38 164.5 305 41.6
Thhalv10010376m.g Eutrema salsugineum HOM05D004785 ORTHO05D005704 1.9e-38 164.1 314 40.4
Sopen01g033900 Solanum pennellii HOM05D004785 ORTHO05D005704 1.9e-38 164.1 318 42.5
AT3G52120 Arabidopsis thaliana HOM05D004785 ORTHO05D005704 2.5e-38 163.7 313 41.5
Sp5g10160 Schrenkiella parvula HOM05D004785 ORTHO05D005704 7.3e-38 162.2 322 39.8
GSVIVG01032056001 Vitis vinifera HOM05D004785 ORTHO05D005704 7.3e-38 162.2 315 41.0
Gohir.A08G027150 Gossypium hirsutum HOM05D004785 ORTHO05D005704 9.5e-38 161.8 312 42.6
THA.LOC104801982 Tarenaya hassleriana HOM05D004785 ORTHO05D005704 9.5e-38 161.8 314 40.4
BolC8t50356H Brassica oleracea HOM05D004785 ORTHO05D005704 2.1e-37 160.6 336 39.3
Lj3g0006296 Lotus japonicus HOM05D004785 ORTHO05D005704 2.8e-37 160.2 310 43.5
C08p27390 Brassica napus HOM05D004785 ORTHO05D005704 3.6e-37 159.8 336 39.3
Lsat_1_v5_gn_4_68280 Lactuca sativa HOM05D004785 ORTHO05D005704 6.2e-37 159.1 273 42.1
vmacro21177 Vaccinium macrocarpon HOM05D004785 ORTHO05D005704 6.2e-37 159.1 315 41.6
Duzib138G0206 Durio zibethinus HOM05D004785 ORTHO05D005704 8.0e-37 158.7 318 41.2
Potri.009G064600 Populus trichocarpa HOM05D004785 ORTHO05D005704 8.0e-37 158.7 330 39.1
Aa31LG10G7210 Aethionema arabicum HOM05D004785 ORTHO05D005704 1.1e-36 158.3 326 39.0
Hund03669 Selenicereus undatus HOM05D004785 ORTHO05D005704 1.4e-36 157.9 301 40.2
A09p45180 Brassica napus HOM05D004785 ORTHO05D005704 1.8e-36 157.5 334 40.4
BraA09t39981Z Brassica rapa HOM05D004785 ORTHO05D005704 1.8e-36 157.5 333 40.5
Prupe.2G009600 Prunus persica HOM05D004785 ORTHO05D005704 1.8e-36 157.5 322 40.1
TWI73G0859 Tripterygium wilfordii HOM05D004785 ORTHO05D005704 2.3e-36 157.1 287 42.9
BcaNung06094 Brassica carinata HOM05D004785 ORTHO05D005704 3.1e-36 156.8 334 39.2
MD07G1006500 Malus domestica HOM05D004785 ORTHO05D005704 8.9e-36 155.2 306 38.9
Nn2g15504 Nelumbo nucifera HOM05D004785 ORTHO05D005704 8.9e-36 155.2 319 38.6
AL5G32690 Arabidopsis lyrata HOM05D004785 ORTHO05D005704 1.2e-35 154.8 342 37.7
Cpa.g.sc234.14 Carica papaya HOM05D004785 ORTHO05D005704 2.6e-35 153.7 344 38.7
MD02G1315400 Malus domestica HOM05D004785 ORTHO05D005704 5.8e-35 152.5 306 39.2
CANSAT11G0943 Cannabis sativa HOM05D004785 ORTHO05D005704 1.7e-34 151.0 278 43.2
Hma1.2p1_0845F.1_g227490 Hydrangea macrophylla HOM05D004785 ORTHO05D005704 1.7e-34 151.0 296 40.2
SalBow5G0866 Salvia bowleyana HOM05D004785 ORTHO05D005704 6.4e-34 149.1 285 41.8
SalBow5G5194 Salvia bowleyana HOM05D004785 ORTHO05D005704 6.4e-34 149.1 285 41.8
ATR0733G146 Amborella trichopoda HOM05D004785 ORTHO05D005704 8.3e-34 148.7 283 41.0
CSS0016942 Camellia sinensis var. sinensis HOM05D004785 ORTHO05D005704 8.3e-34 148.7 294 40.8
CSS0030425 Camellia sinensis var. sinensis HOM05D004785 ORTHO05D005704 1.4e-33 147.9 294 40.8
QL04p005208 Quercus lobata HOM05D004785 ORTHO05D005704 1.9e-33 147.5 310 38.4
Ciclev10031609m.g Citrus clementina HOM05D004785 ORTHO05D005704 2.4e-33 147.1 288 42.7
SMO358G0717 Selaginella moellendorffii HOM05D004785 ORTHO05D005704 7.0e-33 145.6 314 43.6
TWI09G1360 Tripterygium wilfordii HOM05D004785 ORTHO05D005704 2.7e-32 143.7 287 40.8
Sabra09G0047800 Salix brachista HOM05D004785 ORTHO05D005704 3.5e-32 143.3 296 39.2
Duzib268G1355 Durio zibethinus HOM05D004785 ORTHO05D005704 4.6e-32 142.9 310 38.4
Manes.10G146300 Manihot esculenta HOM05D004785 ORTHO05D005704 6.0e-32 142.5 288 38.5
Sabra16G0165300 Salix brachista HOM05D004785 ORTHO05D005704 7.8e-32 142.1 307 39.1
CDE10G1291 Ceratophyllum demersum HOM05D004785 ORTHO05D005704 1.1e-30 138.3 297 37.7
Eucgr.J01259 Eucalyptus grandis HOM05D004785 ORTHO05D005704 1.5e-30 137.9 291 39.2
Atru.chr11.2638 Acer truncatum HOM05D004785 ORTHO05D005704 1.9e-30 137.5 291 40.5
Actinidia20681 Actinidia chinensis HOM05D004785 ORTHO05D005704 2.5e-30 137.1 304 39.5
EL10Ac9g21166 Beta vulgaris HOM05D004785 ORTHO05D005704 2.5e-30 137.1 272 39.7
MBI01_g36433_MAGBIO Magnolia biondii HOM05D004785 ORTHO05D005704 2.5e-30 137.1 311 37.9
PGR044G1403 Punica granatum HOM05D004785 ORTHO05D005704 2.5e-30 137.1 283 42.0
unitig_61.g26449 Utricularia gibba HOM05D004785 ORTHO05D005704 4.3e-30 136.3 282 41.1
Oeu014580.2 Olea europaea HOM05D004785 ORTHO05D005704 9.5e-30 135.2 292 41.1
TAR633G2005 Trochodendron aralioides HOM05D004785 ORTHO05D005704 9.5e-30 135.2 325 38.5
Eucgr.G03395 Eucalyptus grandis HOM05D004785 ORTHO05D005704 1.2e-29 134.8 314 37.6
PSO339G6673 Papaver somniferum HOM05D004785 ORTHO05D005704 1.2e-29 134.8 251 41.0
PSO384G1867 Papaver somniferum HOM05D004785 ORTHO05D005704 1.6e-29 134.4 258 40.3
Peaxi162Scf00428g00096 Petunia axillaris HOM05D004785 ORTHO05D005704 2.1e-29 134.0 293 41.3
Ca_23868_v3 Cicer arietinum L. HOM05D004785 ORTHO05D005704 3.6e-29 133.3 265 39.6
CDE04G1996 Ceratophyllum demersum HOM05D004785 ORTHO05D005704 6.2e-29 132.5 249 40.2
Manes.07G003900 Manihot esculenta HOM05D004785 ORTHO05D005704 8.1e-29 132.1 288 37.5
Nitab4.5_0001542g0040 Nicotiana tabacum HOM05D004785 ORTHO05D005704 1.1e-28 131.7 189 45.5
Actinidia21563 Actinidia chinensis HOM05D004785 ORTHO05D005704 1.4e-28 131.3 227 48.5
Sc15g0001680 Simmondsia chinensis HOM05D004785 ORTHO05D005704 4.0e-28 129.8 232 40.5
SEGI_00751 Sequoiadendron giganteum HOM05D004785 ORTHO05D005704 5.2e-28 129.4 295 42.0
AUR62022266 Chenopodium quinoa HOM05D004785 ORTHO05D005704 9.9e-27 125.2 277 37.9
Hund07648 Selenicereus undatus HOM05D004785 ORTHO05D005704 9.9e-27 125.2 279 36.2
Haze_03237 Corylus avellana HOM05D004785 ORTHO05D005704 8.3e-26 122.1 206 41.3
SGA_v2.0_scaffold95G28788 Striga asiatica HOM05D004785 ORTHO05D005704 1.9e-25 120.9 304 33.6
HPP92_022791 Vanilla planifolia HOM05D004785 ORTHO05D005704 2.4e-25 120.6 296 36.1
Zm00001eb325220 Zea mays HOM05D004785 ORTHO05D005704 5.4e-25 119.4 283 40.6
CBR_g19876 Chara braunii HOM05D004785 ORTHO05D005704 1.2e-24 118.2 367 35.7
COL.COLO4_23900 Corchorus olitorius HOM05D004785 ORTHO05D005704 3.5e-24 116.7 290 37.6
SHI47607 Sapria himalayana HOM05D004785 ORTHO05D005704 6.0e-24 115.9 185 44.9
SHI47732 Sapria himalayana HOM05D004785 ORTHO05D005704 6.0e-24 115.9 185 44.9
Gorai.004G174100 Gossypium raimondii HOM05D004785 ORTHO05D005704 1.5e-22 111.3 317 38.8
Gohir.D08G166700 Gossypium hirsutum HOM05D004785 ORTHO05D005704 5.6e-22 109.4 318 38.4
Lj7C568G16 Lonicera japonica HOM05D004785 ORTHO05D005704 3.4e-19 100.1 303 35.0
unitig_0.g1380 Utricularia gibba HOM05D004785 ORTHO05D005704 1.3e-18 98.2 153 45.8
Gohir.A08G145800 Gossypium hirsutum HOM05D004785 ORTHO05D005704 4.9e-18 96.3 296 35.5
AUR62031974 Chenopodium quinoa HOM05D004785 ORTHO05D005704 1.4e-17 94.7 273 33.0
MCO15G372 Micromonas commoda HOM05D004785 ORTHO05D005704 1.6e-08 64.7 74 50.0
DCAR_029653 Daucus carota HOM05D004785 ORTHO05D005704 3.5e-08 63.5 305 30.5
Cre16.g686000 Chlamydomonas reinhardtii HOM05D004785 ORTHO05D005704 1.1e-06 58.5 69 47.8


User provided reference genes

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