Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_25980 Physcomitrium patens HOM05D007345 ORTHO05D009277 1.8e-159 565.8 287 100.0
Mapoly0014s0070 Marchantia polymorpha HOM05D007345 ORTHO05D009277 2.1e-62 243.4 206 58.3
AagrBONN_evm.TU.Sc2ySwM_117.2683 Anthoceros agrestis HOM05D007345 ORTHO05D009277 3.7e-59 232.6 158 68.4
SMO352G0035 Selaginella moellendorffii HOM05D007345 ORTHO05D009277 1.5e-57 227.3 213 54.0
TAR629G0192 Trochodendron aralioides HOM05D007345 ORTHO05D009277 1.5e-52 210.7 209 49.8
TAR629G2718 Trochodendron aralioides HOM05D007345 ORTHO05D009277 4.4e-52 209.1 209 49.8
TAR485G0005 Trochodendron aralioides HOM05D007345 ORTHO05D009277 2.2e-51 206.8 209 49.3
CBR_g52222 Chara braunii HOM05D007345 ORTHO05D009277 4.5e-49 199.1 201 46.3
HanXRQChr13g0409411 Helianthus annuus HOM05D007345 ORTHO05D009277 5.0e-48 195.7 210 48.6
Aqoxy3G04287 Aquilegia oxysepala HOM05D007345 ORTHO05D009277 6.5e-48 195.3 211 50.7
SEGI_13495 Sequoiadendron giganteum HOM05D007345 ORTHO05D009277 2.1e-46 190.3 169 58.6
Sed0020487 Sechium edule HOM05D007345 ORTHO05D009277 3.6e-46 189.5 243 40.7
CDE05G0430 Ceratophyllum demersum HOM05D007345 ORTHO05D009277 1.0e-45 188.0 223 44.8
Ciclev10021617m.g Citrus clementina HOM05D007345 ORTHO05D009277 1.8e-45 187.2 218 42.2
GSVIVG01029370001 Vitis vinifera HOM05D007345 ORTHO05D009277 2.3e-45 186.8 232 42.2
Sc10g0008500 Simmondsia chinensis HOM05D007345 ORTHO05D009277 3.0e-45 186.4 214 44.4
arahy.Tifrunner.gnm1.ann1.TRXD5D Arachis hypogaea HOM05D007345 ORTHO05D009277 8.8e-45 184.9 212 44.3
arahy.Tifrunner.gnm1.ann1.X12NHK Arachis hypogaea HOM05D007345 ORTHO05D009277 8.8e-45 184.9 212 44.3
Actinidia35146 Actinidia chinensis HOM05D007345 ORTHO05D009277 1.5e-44 184.1 246 42.3
Glyma.05G249000 Glycine max HOM05D007345 ORTHO05D009277 2.0e-44 183.7 229 41.0
EL10Ac8g19438 Beta vulgaris HOM05D007345 ORTHO05D009277 2.6e-44 183.3 215 44.7
AUR62033076 Chenopodium quinoa HOM05D007345 ORTHO05D009277 7.4e-44 181.8 213 43.7
HPP92_025712 Vanilla planifolia HOM05D007345 ORTHO05D009277 7.4e-44 181.8 211 46.4
HPP92_025754 Vanilla planifolia HOM05D007345 ORTHO05D009277 9.7e-44 181.4 211 46.9
CiPaw.16G072000 Carya illinoinensis HOM05D007345 ORTHO05D009277 1.7e-43 180.6 220 43.2
Cc00_g18760 Coffea canephora HOM05D007345 ORTHO05D009277 2.8e-43 179.9 232 41.8
Dinv13291 Davidia involucrata HOM05D007345 ORTHO05D009277 2.8e-43 179.9 209 44.5
Hma1.2p1_0403F.1_g145230 Hydrangea macrophylla HOM05D007345 ORTHO05D009277 2.8e-43 179.9 213 45.1
PSO782G0509 Papaver somniferum HOM05D007345 ORTHO05D009277 2.8e-43 179.9 209 43.5
CANSAT01G1136 Cannabis sativa HOM05D007345 ORTHO05D009277 4.8e-43 179.1 208 45.2
ATR0618G142 Amborella trichopoda HOM05D007345 ORTHO05D009277 8.2e-43 178.3 210 47.1
CsaV3_1G005120 Cucumis sativus L. HOM05D007345 ORTHO05D009277 8.2e-43 178.3 208 44.2
Rhsim12G0136700 Rhododendron simsii HOM05D007345 ORTHO05D009277 1.1e-42 177.9 196 46.4
FAN08G2921 Fragaria x ananassa HOM05D007345 ORTHO05D009277 1.8e-42 177.2 205 44.4
Lalb_Chr09g0330151 Lupinus albus HOM05D007345 ORTHO05D009277 3.1e-42 176.4 216 43.5
Nitab4.5_0004612g0070 Nicotiana tabacum HOM05D000066 ORTHO05D000003 3.1e-42 176.4 240 40.0
Lj5A166T75 Lonicera japonica HOM05D007345 ORTHO05D009277 4.1e-42 176.0 198 43.9
TWI60G0762 Tripterygium wilfordii HOM05D007345 ORTHO05D009277 4.1e-42 176.0 216 43.5
Cfa017791 Carpinus fangiana HOM05D007345 ORTHO05D009277 5.3e-42 175.6 222 41.0
Potri.015G029700 Populus trichocarpa HOM05D007345 ORTHO05D009277 7.0e-42 175.3 233 41.6
Thecc.03G072800 Theobroma cacao HOM05D007345 ORTHO05D009277 7.0e-42 175.3 226 41.2
Cpa.g.sc111.41 Carica papaya HOM05D007345 ORTHO05D009277 9.1e-42 174.9 238 39.9
FAN18G3356 Fragaria x ananassa HOM05D007345 ORTHO05D009277 9.1e-42 174.9 205 43.9
LjContig00484g0026271 Lotus japonicus HOM05D007345 ORTHO05D009277 9.1e-42 174.9 218 43.1
Oeu061194.1 Olea europaea HOM05D007345 ORTHO05D009277 9.1e-42 174.9 236 40.7
CSS0049327 Camellia sinensis var. sinensis HOM05D007345 ORTHO05D009277 1.2e-41 174.5 234 41.0
Lsat_1_v5_gn_3_108980 Lactuca sativa HOM05D007345 ORTHO05D009277 1.2e-41 174.5 210 45.2
Ca_17167_v3 Cicer arietinum L. HOM05D007345 ORTHO05D009277 1.6e-41 174.1 241 40.7
Eucgr.H00620 Eucalyptus grandis HOM05D007345 ORTHO05D009277 1.6e-41 174.1 210 42.4
CAN.G1909.2 Capsicum annuum HOM05D007345 ORTHO05D009277 2.0e-41 173.7 237 40.5
FAN04G1809 Fragaria x ananassa HOM05D007345 ORTHO05D009277 2.0e-41 173.7 205 43.9
COL.COLO4_05810 Corchorus olitorius HOM05D007345 ORTHO05D009277 2.6e-41 173.3 219 41.1
Migut.D02059 Erythranthe guttata HOM05D007345 ORTHO05D009277 4.5e-41 172.6 219 42.9
FvH4_5g18270 Fragaria vesca HOM05D007345 ORTHO05D009277 4.5e-41 172.6 198 44.9
Nitab4.5_0000782g0230 Nicotiana tabacum HOM05D000001 ORTHO05D000003 4.5e-41 172.6 200 44.5
Peaxi162Scf00171g00331 Petunia axillaris HOM05D007345 ORTHO05D009277 7.7e-41 171.8 204 44.6
SalBow1G0799 Salvia bowleyana HOM05D007345 ORTHO05D009277 1.0e-40 171.4 241 40.2
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 1.3e-40 171.0 221 41.2
MD06G1238300 Malus domestica HOM05D007345 ORTHO05D009277 1.7e-40 170.6 239 41.8
RcHm_v2.0_Chr7g0177311 Rosa chinensis HOM05D007345 ORTHO05D009277 1.7e-40 170.6 206 43.7
Phvul.002G333600 Phaseolus vulgaris HOM05D007345 ORTHO05D009277 2.9e-40 169.9 235 41.3
AT3G17670 Arabidopsis thaliana HOM05D007345 ORTHO05D009277 3.8e-40 169.5 215 41.9
SGA_v2.0_scaffold164G38118 Striga asiatica HOM05D007345 ORTHO05D009277 6.5e-40 168.7 242 41.3
AUR62034041 Chenopodium quinoa HOM05D007345 ORTHO05D009277 1.1e-39 167.9 219 42.5
Sabra15G0024900 Salix brachista HOM05D007345 ORTHO05D009277 1.1e-39 167.9 206 43.2
PGR083G0906 Punica granatum HOM05D007345 ORTHO05D009277 1.5e-39 167.5 233 38.6
Solyc03g098440.4 Solanum lycopersicum HOM05D007345 ORTHO05D009277 2.5e-39 166.8 231 39.8
BraA05t22048Z Brassica rapa HOM05D007345 ORTHO05D009277 3.2e-39 166.4 221 41.2
Haze_18424 Corylus avellana HOM05D007345 ORTHO05D009277 3.2e-39 166.4 206 42.2
Atru.chr9.353 Acer truncatum HOM05D007345 ORTHO05D009277 4.2e-39 166.0 220 40.0
Nn4g24918 Nelumbo nucifera HOM05D007345 ORTHO05D009277 5.5e-39 165.6 157 51.0
AL3G30780 Arabidopsis lyrata HOM05D007345 ORTHO05D009277 9.4e-39 164.9 215 41.4
Medtr3g015440 Medicago truncatula HOM05D007345 ORTHO05D009277 1.6e-38 164.1 210 39.5
Sp3g15810 Schrenkiella parvula HOM05D007345 ORTHO05D009277 1.6e-38 164.1 214 41.1
unitig_0.g26 Utricularia gibba HOM05D007345 ORTHO05D009277 2.1e-38 163.7 241 36.9
A05p32180 Brassica napus HOM05D007345 ORTHO05D009277 3.6e-38 162.9 217 41.0
C05p48720 Brassica napus HOM05D007345 ORTHO05D009277 6.1e-38 162.2 214 40.7
BolC5t33608H Brassica oleracea HOM05D007345 ORTHO05D009277 6.1e-38 162.2 214 40.7
Manes.02G214200 Manihot esculenta HOM05D007345 ORTHO05D009277 6.1e-38 162.2 212 40.1
CARHR093010 Cardamine hirsuta HOM05D007345 ORTHO05D009277 8.0e-38 161.8 215 40.5
Os04g0674100 Oryza sativa ssp. japonica HOM05D007345 ORTHO05D009277 8.0e-38 161.8 215 44.7
Sopen03g029180 Solanum pennellii HOM05D007345 ORTHO05D009277 1.4e-37 161.0 231 38.5
BcaB06g25825 Brassica carinata HOM05D007345 ORTHO05D009277 1.8e-37 160.6 221 39.8
Prupe.5G242200 Prunus persica HOM05D007345 ORTHO05D009277 3.0e-37 159.8 233 40.3
Carub.0003s1739 Capsella rubella HOM05D007345 ORTHO05D009277 4.0e-37 159.5 215 40.5
ClCG04G012580 Citrullus lanatus HOM05D007345 ORTHO05D009277 4.0e-37 159.5 241 38.2
Thhalv10021436m.g Eutrema salsugineum HOM05D007345 ORTHO05D009277 4.4e-36 156.0 215 39.1
VMungo0251G1758 Vigna mungo HOM05D007345 ORTHO05D009277 7.5e-36 155.2 247 37.2
Zm00001eb066530 Zea mays HOM05D007345 ORTHO05D009277 7.5e-36 155.2 212 43.4
DCAR_023255 Daucus carota HOM05D007345 ORTHO05D009277 1.0e-29 134.8 181 42.0
ECA240G0690 Erigeron canadensis HOM05D007345 ORTHO05D009277 2.6e-28 130.2 173 42.8
PGSC0003DMG400010180 Solanum tuberosum HOM05D007345 ORTHO05D009277 1.3e-27 127.9 337 29.1
vmacro16392 Vaccinium macrocarpon HOM05D007345 ORTHO05D009277 3.7e-27 126.3 148 41.9
Ah.09g231730 Amaranthus hybridus HOM05D007345 ORTHO05D009277 6.3e-27 125.6 199 36.2
Cre16.g674534 Chlamydomonas reinhardtii HOM05D007345 ORTHO05D009277 2.7e-25 120.2 202 35.6
Lj9C350T12 Lonicera japonica HOM05D000001 ORTHO05D009373 5.0e-24 115.9 154 40.3
PSO063G1698 Papaver somniferum HOM05D007345 ORTHO05D009277 6.6e-24 115.5 247 31.6
MELO3C001950.2 Cucumis melo HOM05D007345 ORTHO05D009277 1.1e-23 114.8 130 42.3
Psat7g000360 Pisum sativum HOM05D007345 ORTHO05D009277 9.5e-23 111.7 132 44.7
Zm00001eb184330 Zea mays HOM05D007345 ORTHO05D009277 3.4e-20 103.2 159 41.5
MSTRG.9709 Avicennia marina HOM05D007345 ORTHO05D009277 1.7e-19 100.9 127 39.4
CAN.G1635.20 Capsicum annuum HOM05D007345 ORTHO05D009277 3.7e-19 99.8 217 32.3
FAN13G2172 Fragaria x ananassa HOM05D007345 ORTHO05D009277 9.2e-18 95.1 143 38.5
Eucgr.H00622 Eucalyptus grandis HOM05D007345 ORTHO05D009277 2.6e-12 77.0 98 39.8
Os12g0636100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 8.3e-11 72.0 114 37.7
CsaV3_2G013500 Cucumis sativus L. HOM05D006451 ORTHO05D007680 4.1e-10 69.7 99 39.4
HPP92_001912 Vanilla planifolia HOM05D006451 ORTHO05D007680 5.4e-10 69.3 102 38.2
Potri.008G156500 Populus trichocarpa HOM05D006451 ORTHO05D007680 9.2e-10 68.6 110 35.5
BcaC07g36931 Brassica carinata HOM05D004359 ORTHO05D005052 1.2e-09 68.2 126 33.3
C08p00930 Brassica napus HOM05D004359 ORTHO05D005052 1.2e-09 68.2 126 33.3
Manes.15G032000 Manihot esculenta HOM05D006451 ORTHO05D007680 1.6e-09 67.8 151 31.1
BolC8t46894H Brassica oleracea HOM05D004359 ORTHO05D005052 2.0e-09 67.4 126 33.3
BraA08t35607Z Brassica rapa HOM05D006451 ORTHO05D007680 2.0e-09 67.4 126 33.3
THA.LOC104826059 Tarenaya hassleriana HOM05D006451 ORTHO05D007680 2.0e-09 67.4 138 32.6
CANSAT78G2142 Cannabis sativa HOM05D006451 ORTHO05D007680 2.7e-09 67.0 112 36.6
A08p37070 Brassica napus HOM05D006451 ORTHO05D007680 3.5e-09 66.6 126 33.3
Manes.03G174100 Manihot esculenta HOM05D006451 ORTHO05D007680 3.5e-09 66.6 111 36.0
QL06p001354 Quercus lobata HOM05D006451 ORTHO05D007680 3.5e-09 66.6 101 37.6
CiPaw.01G196900 Carya illinoinensis HOM05D006451 ORTHO05D007680 4.6e-09 66.2 101 37.6
Glyma.02G004400 Glycine max HOM05D006451 ORTHO05D007680 6.0e-09 65.9 111 34.2
Haze_11218 Corylus avellana HOM05D006451 ORTHO05D007680 1.0e-08 65.1 103 35.9
TWI09G1365 Tripterygium wilfordii HOM05D006451 ORTHO05D007680 1.0e-08 65.1 126 33.3
Sabra08G0119100 Salix brachista HOM05D006451 ORTHO05D007680 1.3e-08 64.7 103 35.0
Nitab4.5_0000085g0050 Nicotiana tabacum HOM05D006451 ORTHO05D007680 3.9e-08 63.2 121 34.7
AagrBONN_evm.TU.Sc2ySwM_368.3405 Anthoceros agrestis HOM05D001789 ORTHO05D001755 5.0e-08 62.8 109 33.9
BcaC07g42200 Brassica carinata HOM05D006451 ORTHO05D007680 5.0e-08 62.8 133 33.8
Duzib151G0283 Durio zibethinus HOM05D006451 ORTHO05D007680 8.6e-08 62.0 107 34.6
Cre03.g189950 Chlamydomonas reinhardtii HOM05D002462 ORTHO05D002893 1.1e-07 61.6 124 33.9
Sed0026394 Sechium edule HOM05D006451 ORTHO05D007680 1.1e-07 61.6 99 35.4
Medtr7g115280 Medicago truncatula HOM05D001789 ORTHO05D001755 1.5e-07 61.2 109 33.9
AUR62001052 Chenopodium quinoa HOM05D001789 ORTHO05D001755 1.9e-07 60.8 108 35.2
PRCOL_00004439 Prasinoderma coloniale HOM05D001789 ORTHO05D001755 1.9e-07 60.8 108 37.0
Potri.010G082900 Populus trichocarpa HOM05D006451 ORTHO05D007680 2.5e-07 60.5 137 30.7
PRCOL_00001636 Prasinoderma coloniale HOM05D007345 ORTHO05D009277 2.5e-07 60.5 51 47.1
PRCOL_00004533 Prasinoderma coloniale HOM05D001714 ORTHO05D044203 2.5e-07 60.5 111 36.0
Sabra10G0060200 Salix brachista HOM05D006451 ORTHO05D007680 2.5e-07 60.5 137 30.7
Zm00001eb031280 Zea mays HOM05D006451 ORTHO05D007680 2.5e-07 60.5 95 36.8
HPP92_009631 Vanilla planifolia HOM05D001789 ORTHO05D001755 3.3e-07 60.1 108 36.1
ClCG06G006410 Citrullus lanatus HOM05D006451 ORTHO05D007680 4.3e-07 59.7 114 34.2
Sc25g0004270 Simmondsia chinensis HOM05D006451 ORTHO05D007680 4.3e-07 59.7 99 33.3
HanXRQChr17g0541261 Helianthus annuus HOM05D000115 ORTHO05D005317 5.6e-07 59.3 100 37.0
ECA238G4657 Erigeron canadensis HOM05D006295 ORTHO05D008061 7.3e-07 58.9 154 29.2
Psat2g073120 Pisum sativum HOM05D000868 ORTHO05D000711 9.5e-07 58.5 112 31.2
AUR62004900 Chenopodium quinoa HOM05D001789 ORTHO05D001755 1.2e-06 58.2 108 34.3
MELO3C014459.2 Cucumis melo HOM05D000115 ORTHO05D005317 1.2e-06 58.2 93 36.6
Os02g0494400 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.6e-06 57.8 108 34.3
Os12g0604800 Oryza sativa ssp. japonica HOM05D006451 ORTHO05D007680 1.6e-06 57.8 123 31.7
ClCG09G022290 Citrullus lanatus HOM05D000115 ORTHO05D005317 2.1e-06 57.4 93 36.6
CiPaw.07G068600 Carya illinoinensis HOM05D001789 ORTHO05D001755 2.8e-06 57.0 108 32.4
CsaV3_6G037960 Cucumis sativus L. HOM05D000115 ORTHO05D005317 2.8e-06 57.0 95 35.8
Peaxi162Scf00282g00618 Petunia axillaris HOM05D001789 ORTHO05D001755 2.8e-06 57.0 108 31.5
EL10Ac4g09088 Beta vulgaris HOM05D001789 ORTHO05D001755 3.6e-06 56.6 108 32.4
Manes.09G010500 Manihot esculenta HOM05D002345 ORTHO05D002391 3.6e-06 56.6 109 33.0
Os03g0680566 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 3.6e-06 56.6 105 35.2
Solyc01g097190.4 Solanum lycopersicum HOM05D001789 ORTHO05D001755 3.6e-06 56.6 109 31.2
Sopen01g040860 Solanum pennellii HOM05D001789 ORTHO05D001755 3.6e-06 56.6 109 31.2
ATR0743G253 Amborella trichopoda HOM05D001369 ORTHO05D001235 4.7e-06 56.2 108 28.7
MELO3C014291.2 Cucumis melo HOM05D006451 ORTHO05D007680 4.7e-06 56.2 95 36.8
PSO339G4712 Papaver somniferum HOM05D002345 ORTHO05D002391 4.7e-06 56.2 108 37.0
PSO384G1410 Papaver somniferum HOM05D001789 ORTHO05D001755 4.7e-06 56.2 108 33.3
PSO384G2553 Papaver somniferum HOM05D002345 ORTHO05D002391 4.7e-06 56.2 108 37.0
Rhsim02G0028200 Rhododendron simsii HOM05D006451 ORTHO05D007680 4.7e-06 56.2 128 34.4
Cpa.g.sc44.112 Carica papaya HOM05D006451 ORTHO05D007680 6.2e-06 55.8 78 35.9
Cfa025863 Carpinus fangiana HOM05D002462 ORTHO05D002893 6.2e-06 55.8 98 34.7
Gohir.D13G175000 Gossypium hirsutum HOM05D001789 ORTHO05D001755 6.2e-06 55.8 108 31.5
Gorai.013G200300 Gossypium raimondii HOM05D001789 ORTHO05D001755 6.2e-06 55.8 108 31.5
PSO339G5673 Papaver somniferum HOM05D001789 ORTHO05D001755 6.2e-06 55.8 108 33.3
CSS0016190 Camellia sinensis var. sinensis HOM05D001789 ORTHO05D001755 8.0e-06 55.5 108 30.6
Cpa.g.sc617.3 Carica papaya HOM05D001789 ORTHO05D001755 8.0e-06 55.5 109 33.0
QL08p043628 Quercus lobata HOM05D000115 ORTHO05D005317 8.0e-06 55.5 92 33.7


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