Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 9.3e-107 390.6 252 100.0
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 2.6e-40 169.9 251 62.5
Pp3c2_27910 Physcomitrium patens HOM05D006605 ORTHO05D008277 4.1e-38 162.5 224 55.4
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 2.0e-32 143.7 170 72.4
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 2.8e-31 139.8 171 59.6
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 3.2e-30 136.3 168 67.9
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 1.2e-29 134.4 191 60.2
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 3.9e-28 129.4 164 61.6
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 3.9e-28 129.4 170 67.1
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 6.6e-28 128.6 165 65.5
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 6.6e-28 128.6 170 68.2
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 6.6e-28 128.6 168 60.7
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 6.6e-28 128.6 174 63.2
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 6.6e-28 128.6 225 55.1
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 8.6e-28 128.3 171 63.7
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 8.6e-28 128.3 170 65.9
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 8.6e-28 128.3 174 62.6
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.1e-27 127.9 174 62.1
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 1.1e-27 127.9 165 69.1
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 1.9e-27 127.1 225 55.1
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 1.9e-27 127.1 165 69.1
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 3.3e-27 126.3 171 65.5
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 5.6e-27 125.6 174 66.1
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 5.6e-27 125.6 170 65.3
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 7.3e-27 125.2 163 62.6
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 9.5e-27 124.8 225 55.6
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 9.5e-27 124.8 172 66.3
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 1.2e-26 124.4 164 68.3
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 1.2e-26 124.4 164 67.1
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 1.2e-26 124.4 170 64.7
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 1.2e-26 124.4 166 68.1
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 1.6e-26 124.0 166 65.7
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 1.6e-26 124.0 164 67.7
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 2.1e-26 123.6 170 66.5
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 2.1e-26 123.6 164 62.2
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 2.1e-26 123.6 165 67.3
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 2.8e-26 123.2 171 63.2
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 2.8e-26 123.2 166 60.2
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.6e-26 122.9 164 65.9
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.6e-26 122.9 164 65.9
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 3.6e-26 122.9 166 67.5
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 3.6e-26 122.9 165 68.5
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 3.6e-26 122.9 170 64.7
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 4.7e-26 122.5 168 67.3
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 8.0e-26 121.7 167 66.5
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 1.0e-25 121.3 164 67.7
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 1.0e-25 121.3 164 67.1
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 1.0e-25 121.3 165 68.5
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.8e-25 120.6 164 65.2
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 1.8e-25 120.6 166 66.9
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 2.3e-25 120.2 166 66.3
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 3.1e-25 119.8 167 64.7
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 3.1e-25 119.8 166 64.5
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 3.1e-25 119.8 164 64.6
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 4.0e-25 119.4 171 66.1
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 4.0e-25 119.4 240 53.3
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 4.0e-25 119.4 168 64.9
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 4.0e-25 119.4 168 67.3
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 5.2e-25 119.0 169 64.5
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 6.8e-25 118.6 171 64.9
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 6.8e-25 118.6 170 63.5
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 6.8e-25 118.6 166 56.6
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 8.9e-25 118.2 163 63.2
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 2.0e-24 117.1 215 54.0
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 5.8e-24 115.5 175 64.6
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 5.8e-24 115.5 169 58.6
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 5.8e-24 115.5 164 65.9
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 1.7e-23 114.0 170 62.9
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 2.9e-23 113.2 221 54.3
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 6.4e-23 112.1 197 51.8
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 8.3e-23 111.7 170 62.9
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 1.4e-22 110.9 164 61.0
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 2.4e-22 110.2 170 63.5
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 2.4e-22 110.2 163 60.1
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 4.1e-22 109.4 142 70.4
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 5.4e-22 109.0 170 61.8
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 1.2e-21 107.8 212 53.8
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.6e-21 107.5 185 41.1
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 3.5e-21 106.3 142 70.4
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 1.0e-20 104.8 163 55.8
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 1.7e-20 104.0 164 61.0
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 6.6e-20 102.1 200 52.5
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 6.6e-20 102.1 170 60.0
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 6.6e-20 102.1 170 60.0
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 6.6e-20 102.1 170 60.0
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 4.3e-19 99.4 152 64.5
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 4.3e-19 99.4 68 73.5
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 5.6e-19 99.0 76 64.5
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 2.8e-18 96.7 168 61.3
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.6e-18 96.3 143 66.4
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 1.8e-17 94.0 155 61.3
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 2.3e-17 93.6 65 72.3
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 5.2e-17 92.4 144 67.4
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 4.4e-16 89.4 170 57.1
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 5.8e-16 89.0 170 55.9
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 5.8e-16 89.0 170 55.9
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 7.5e-16 88.6 170 55.9
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 1.3e-15 87.8 170 55.3
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 1.4e-14 84.3 171 56.7
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 2.7e-13 80.1 166 56.6
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 7.8e-13 78.6 50 74.0
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 3.9e-12 76.3 182 47.8
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 5.1e-12 75.9 169 58.6
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 8.6e-12 75.1 164 59.1
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 1.9e-11 73.9 44 77.3
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 1.9e-11 73.9 53 64.2
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 4.3e-11 72.8 59 61.0
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 4.3e-11 72.8 50 68.0
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 2.1e-10 70.5 51 66.7
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 3.6e-10 69.7 57 61.4
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 1.4e-09 67.8 126 65.1
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 6.8e-09 65.5 112 37.5
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 4.4e-08 62.8 38 73.7
AUR62040704 Chenopodium quinoa HOM05D006605 ORTHO05D008277 5.4e-06 55.8 35 68.6


User provided reference genes

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