Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 3.2e-56 221.5 107 100.0
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 1.5e-34 149.4 103 64.1
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 6.4e-33 144.1 102 62.7
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.9e-32 142.5 108 60.2
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 4.2e-32 141.4 100 60.0
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 4.2e-32 141.4 100 60.0
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 4.2e-32 141.4 100 60.0
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 4.2e-32 141.4 100 60.0
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 5.4e-32 141.0 102 58.8
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 5.4e-32 141.0 100 59.0
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 7.1e-32 140.6 100 61.0
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 1.2e-31 139.8 100 58.0
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 1.6e-31 139.4 105 56.2
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 1.6e-31 139.4 105 56.2
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 3.5e-31 138.3 100 59.0
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 1.7e-30 136.0 100 56.0
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 3.0e-30 135.2 111 55.0
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 3.9e-30 134.8 100 54.0
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 6.6e-30 134.0 100 56.0
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 6.6e-30 134.0 100 56.0
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 6.6e-30 134.0 102 56.9
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 8.7e-30 133.7 100 56.0
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 8.7e-30 133.7 100 57.0
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.5e-29 132.9 98 57.1
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 1.9e-29 132.5 103 54.4
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 2.5e-29 132.1 100 54.0
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 3.3e-29 131.7 99 55.6
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 4.3e-29 131.3 98 56.1
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 5.6e-29 131.0 98 56.1
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 5.6e-29 131.0 100 56.0
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 1.6e-28 129.4 91 60.4
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 1.6e-28 129.4 99 56.6
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 2.1e-28 129.0 89 58.4
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 2.8e-28 128.6 100 54.0
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 1.1e-27 126.7 100 55.0
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 1.8e-27 125.9 100 51.0
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 1.8e-27 125.9 100 51.0
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 1.8e-27 125.9 100 51.0
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 2.4e-27 125.6 99 54.5
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 2.4e-27 125.6 85 62.4
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 3.1e-27 125.2 100 52.0
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 4.0e-27 124.8 100 52.0
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 4.0e-27 124.8 100 51.0
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 5.3e-27 124.4 94 57.4
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 5.3e-27 124.4 100 52.0
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 5.3e-27 124.4 100 52.0
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 6.9e-27 124.0 100 50.0
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 6.9e-27 124.0 100 50.0
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 6.9e-27 124.0 95 53.7
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 6.9e-27 124.0 99 53.5
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 6.9e-27 124.0 91 54.9
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 9.0e-27 123.6 101 53.5
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 9.0e-27 123.6 100 52.0
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.2e-26 123.2 100 49.0
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 2.0e-26 122.5 100 51.0
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 2.0e-26 122.5 100 50.0
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 2.6e-26 122.1 94 54.3
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 3.4e-26 121.7 102 51.0
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 4.5e-26 121.3 99 51.5
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 4.5e-26 121.3 100 49.0
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 5.8e-26 120.9 100 49.0
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 5.8e-26 120.9 69 68.1
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 7.6e-26 120.6 101 50.5
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 7.6e-26 120.6 87 57.5
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 7.6e-26 120.6 100 49.0
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 7.6e-26 120.6 100 50.0
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 6.4e-25 117.5 99 48.5
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 8.4e-25 117.1 100 47.0
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 4.2e-24 114.8 101 49.5
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.2e-23 113.2 100 49.0
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 2.1e-23 112.5 100 47.0
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 2.7e-23 112.1 96 51.0
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 3.5e-23 111.7 100 49.0
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 7.9e-23 110.5 99 50.5
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.0e-22 110.2 73 58.9
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 1.0e-22 110.2 87 54.0
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 1.0e-22 110.2 62 67.7
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 1.3e-22 109.8 110 51.8
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 3.0e-22 108.6 101 46.5
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 3.9e-22 108.2 100 46.0
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 3.9e-22 108.2 100 46.0
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 5.1e-22 107.8 98 48.0
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 6.7e-22 107.5 99 46.5
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 1.5e-21 106.3 107 47.7
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 1.9e-21 105.9 71 57.7
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 1.9e-21 105.9 105 47.6
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 1.6e-20 102.8 100 50.0
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 2.1e-20 102.4 105 42.9
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 2.1e-20 102.4 105 42.9
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 2.1e-20 102.4 106 45.3
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 4.8e-20 101.3 83 53.0
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 1.4e-19 99.8 101 43.6
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 2.4e-19 99.0 87 48.3
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 3.1e-19 98.6 118 41.5
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 5.3e-19 97.8 87 48.3
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 1.5e-18 96.3 101 43.6
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 2.0e-18 95.9 97 43.3
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 2.0e-18 95.9 97 43.3
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 2.6e-18 95.5 85 50.6
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 7.6e-18 94.0 87 42.5
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 2.2e-17 92.4 97 43.3
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 7.9e-15 84.0 52 61.5
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 1.3e-14 83.2 107 36.4
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.8e-14 82.8 51 58.8
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 3.3e-13 78.6 98 39.8
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 4.3e-13 78.2 86 41.9
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 1.3e-12 76.6 111 34.2
MCO14G029 Micromonas commoda HOM05D007077 ORTHO05D008853 2.1e-12 75.9 111 37.8
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 6.2e-12 74.3 44 63.6
Pp3c23_20070 Physcomitrium patens HOM05D002956 ORTHO05D009000 6.2e-12 74.3 93 49.5
Pp3c6_16060 Physcomitrium patens HOM05D001719 ORTHO05D007646 8.2e-12 73.9 95 48.4
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 9.0e-11 70.5 100 35.0


User provided reference genes

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