Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.2e-171 605.5 305 100.0
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 1.3e-107 393.7 302 66.2
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 1.7e-107 393.3 300 65.0
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 5.0e-107 391.7 300 67.0
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 1.1e-106 390.6 300 65.3
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 1.9e-106 389.8 300 65.0
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 2.5e-106 389.4 300 65.7
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 2.5e-106 389.4 300 66.0
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 3.3e-106 389.0 302 64.9
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 7.3e-106 387.9 303 65.0
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 9.5e-106 387.5 302 64.6
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 9.5e-106 387.5 302 63.6
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 9.5e-106 387.5 300 64.7
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 1.6e-105 386.7 302 65.6
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 2.1e-105 386.3 300 63.3
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 2.8e-105 386.0 301 65.8
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 2.8e-105 386.0 302 65.2
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 3.6e-105 385.6 300 64.3
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 4.7e-105 385.2 302 64.9
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 8.0e-105 384.4 302 64.6
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 8.0e-105 384.4 300 64.7
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 8.0e-105 384.4 300 64.7
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 8.0e-105 384.4 300 64.7
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 1.0e-104 384.0 300 64.3
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 1.8e-104 383.3 304 64.5
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 1.8e-104 383.3 300 65.0
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 1.8e-104 383.3 300 65.0
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 3.1e-104 382.5 303 64.0
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 3.1e-104 382.5 303 64.0
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.1e-104 382.5 301 65.8
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 3.1e-104 382.5 300 63.7
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 3.1e-104 382.5 300 63.7
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 3.1e-104 382.5 300 63.3
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 4.0e-104 382.1 301 65.1
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 4.0e-104 382.1 300 64.7
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 6.8e-104 381.3 300 64.0
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 6.8e-104 381.3 301 65.4
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.5e-103 380.2 301 65.4
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 2.6e-103 379.4 306 64.4
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 2.6e-103 379.4 305 64.9
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 2.6e-103 379.4 303 63.4
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 3.4e-103 379.0 301 65.1
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 3.4e-103 379.0 277 69.3
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.4e-103 378.6 301 65.1
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 4.4e-103 378.6 300 63.7
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 5.8e-103 378.3 300 64.3
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 7.5e-103 377.9 300 63.0
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 2.2e-102 376.3 303 64.0
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 2.2e-102 376.3 303 61.4
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.7e-102 375.6 292 64.0
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 6.4e-102 374.8 302 63.2
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 8.3e-102 374.4 299 64.2
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 1.1e-101 374.0 303 61.7
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.9e-101 373.2 302 62.9
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 1.9e-101 373.2 302 62.6
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 1.9e-101 373.2 303 61.7
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 1.9e-101 373.2 303 61.7
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 3.2e-101 372.5 303 61.4
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 3.2e-101 372.5 302 61.6
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 1.3e-99 367.1 302 61.6
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 2.3e-99 366.3 305 63.6
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 3.0e-99 365.9 300 61.3
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 3.9e-99 365.5 305 61.6
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 1.1e-98 364.0 303 60.7
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 3.3e-98 362.5 302 60.6
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 1.2e-97 360.5 305 61.6
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 1.2e-97 360.5 294 61.9
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 3.6e-97 359.0 305 61.6
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 8.1e-97 357.8 312 60.6
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 5.2e-96 355.1 302 61.3
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 2.6e-95 352.8 299 60.9
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 7.5e-95 351.3 305 57.4
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 7.5e-95 351.3 303 58.1
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 1.3e-94 350.5 306 58.8
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 6.4e-94 348.2 306 58.5
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 8.3e-94 347.8 303 60.1
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 1.4e-93 347.1 303 60.1
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.4e-93 347.1 301 61.8
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 1.9e-93 346.7 303 60.1
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 2.4e-93 346.3 305 60.0
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 2.4e-93 346.3 299 60.2
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 5.4e-93 345.1 303 60.7
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 1.2e-92 344.0 303 58.7
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 2.1e-92 343.2 303 59.4
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 2.7e-92 342.8 299 60.5
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 4.6e-92 342.0 303 59.1
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 7.8e-92 341.3 303 58.4
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 7.8e-92 341.3 303 58.4
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 1.0e-91 340.9 303 58.7
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 1.3e-91 340.5 300 57.0
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.3e-91 340.5 299 59.2
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 1.3e-91 340.5 300 60.0
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 1.3e-91 340.5 300 60.0
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 1.3e-91 340.5 300 60.0
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 2.3e-91 339.7 299 59.2
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 5.1e-91 338.6 303 58.4
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 5.1e-91 338.6 305 57.7
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 2.1e-89 333.2 276 62.3
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 2.3e-88 329.7 299 58.2
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 6.8e-88 328.2 250 65.6
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 1.7e-86 323.6 341 53.1
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 8.6e-83 311.2 169 94.7
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 1.6e-81 307.0 250 62.4
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 2.6e-79 299.7 275 57.1
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 7.6e-79 298.1 231 64.1
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 1.9e-77 293.5 235 63.0
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 3.2e-77 292.7 256 57.8
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 7.8e-76 288.1 250 60.4
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.5e-74 283.9 222 62.6
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.3e-74 282.7 218 63.8
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 4.8e-73 278.9 234 60.3
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 3.4e-71 272.7 220 63.6
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 5.4e-69 265.4 212 62.3
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 4.5e-63 245.7 317 45.4
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 5.6e-58 228.8 300 45.3
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 5.7e-50 202.2 175 56.0
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 1.1e-42 177.9 348 35.3
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 3.8e-38 162.9 174 50.6
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 2.3e-35 153.7 104 73.1
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 4.4e-34 149.4 160 52.5
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 2.5e-29 133.7 302 32.8
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 2.0e-26 124.0 78 74.4
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 3.1e-24 116.7 89 60.7
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 1.0e-22 111.7 89 62.9
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 1.7e-22 110.9 86 67.4
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 2.5e-21 107.1 348 31.0
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 7.2e-21 105.5 93 51.6
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 2.0e-18 97.4 114 50.0
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 1.9e-13 80.9 63 61.9
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.2e-10 71.6 61 50.8
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 2.6e-10 70.5 45 73.3


User provided reference genes

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